RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 Q6ZRP5 223 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 ORMDL3Q8N138 153 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZNF799Q96GE5 643 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 CYYR1Q96J86 154 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 TM2D3Q9BRN9 247 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBM12B-AS1Q9P1G2 102 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 SPAG17Q6Q759 2223 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 ARHGAP21Q5T5U3 1957 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 LRRK1Q38SD2 2015 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 BDP1A6H8Y1 2624 aa3.4□□□□□ -1.86
HMGB3P13-201ENST00000511263 TDRD6O60522 2096 aaKnown RBP3.4□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGHV3OR16-10A0A075B7F0 116 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGKV2D-26A0A0A0MRZ7 120 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRAV12-1A0A0B4J245 112 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRAV41A0A0B4J266 112 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 A0A1W2PNU3 283 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 LINC01546A6NGU7 62 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 H3BSH0 61 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 CLPSP04118 112 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 RBM3P98179 157 aaKnown RBP3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 PAX8Q06710 450 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 KISS1Q15726 138 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 PVRIGQ6DKI7 326 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 FP248Q71RG6 208 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 WDR86Q86TI4 376 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q8N8P6 123 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 TMEM75Q8N9X5 138 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q8NBF4 154 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 SLC50A1Q9BRV3 221 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 U3KQK5 164 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 RAI1Q7Z5J4 1906 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 PI4KAP42356 2102 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 PCDH15Q96QU1 1955 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 PHF3Q92576 2039 aaKnown RBP3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 SDK1Q7Z5N4 2213 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 UNC13CQ8NB66 2214 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGKV1D-8A0A087WSZ0 117 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 A0A096LNJ9 63 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRBV7-1A0A0A6YYK4 115 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 SRRM4A7MD48 611 aaKnown RBP3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 STATHP02808 62 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 CCKP06307 115 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 RNASE2P10153 161 aaKnown RBP3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 EDDM3BP56851 147 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 FGF12P61328 243 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 UBE2BP63146 152 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 KLKP1Q107X0 134 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 PLGLAQ15195 96 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q1RN00 199 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 HIGD2BQ4VC39 106 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q6ZR03 302 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 COX8CQ7Z4L0 72 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 C11orf45Q8TAV5 145 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 DYNLRB2Q8TF09 96 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 SPTSSAQ969W0 71 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 OVOL2Q9BRP0 275 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 DCTN5Q9BTE1 182 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 C11orf68Q9H3H3 251 aaKnown RBP3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 PTPRZ1P23471 2315 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 SEC16AO15027 2179 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 CACNA1HO95180 2353 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 ASXL3Q9C0F0 2248 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGLV1-36A0A0B4J1U3 117 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 WI2-2373I1.2A0A1W2PRP0 233 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF815PA8K554 130 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 IQCF6A8MYZ5 107 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 F8VRH5 84 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 K7EQD1 137 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGKV1D-16P01601 117 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGHV3-13P01766 116 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 LMO4P61968 165 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 FAM222AQ5U5X8 452 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF818PQ6ZRF7 136 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q6ZVQ6 151 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 CD177Q8N6Q3 437 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 SLC25A29Q8N8R3 303 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 C5orf42Q9H799 3197 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 ARID1AO14497 2285 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 CEP192Q8TEP8 1941 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRAV7A0A075B6U4 112 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGHV4-30-2A0A087WSY4 118 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRAV13-2A0A0B4J235 113 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGHV3-20A0A0C4DH32 117 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 C8orf87E5RJ46 101 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 J3QT63 122 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 M0R135 149 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 NXPH4O95158 308 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGHV3-33P01772 117 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 XCL1P47992 114 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF826PQ6ZT77 177 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 MKXQ8IYA7 352 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 PGLYRP4Q96LB8 373 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF714Q96N38 554 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 XCL2Q9UBD3 114 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 PCNX3Q9H6A9 2034 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF318Q5VUA4 2279 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 UNC80Q8N2C7 3258 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 GPR179Q6PRD1 2367 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms