RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 SAP30O75446 220 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 JMJD1CQ15652 2540 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 ATP1A1-AS1Q5TC04 95 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 FAM110AQ9BQ89 295 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 COL4A1P02462 1669 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 PINLYPA6NC86 204 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 MSRB2Q9Y3D2 182 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 IGHV3OR16-10A0A075B7F0 116 aa6.57□□□□□ -1.36
HTT-208ENST00000510626 ATP6V0E1O15342 81 aa6.57□□□□□ -1.36
HTT-208ENST00000510626 NDPQ00604 133 aa6.57□□□□□ -1.36
HTT-208ENST00000510626 A0A1B0GXF2 115 aa6.57□□□□□ -1.36
HTT-208ENST00000510626 LHBP01229 141 aa6.57□□□□□ -1.36
HTT-208ENST00000510626 COL4A5P29400 1685 aa6.57□□□□□ -1.36
HTT-208ENST00000510626 PRR15LQ9BU68 103 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 LOXL1Q08397 574 aaPredicted RBP6.56□□□□□ -1.36
HTT-208ENST00000510626 NREPQ16612 68 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 ZNF491Q8N8L2 437 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 SND1-IT1Q9HBX3 110 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 TNRC6BQ9UPQ9 1833 aaKnown RBP6.56□□□□□ -1.36
HTT-208ENST00000510626 EPOPA6NHQ4 379 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 BUB3O43684 328 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 COL8A2P25067 703 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 LINC00574Q9H8X3 128 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 FAM222AQ5U5X8 452 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 SAA4P35542 130 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 MIAQ16674 131 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 CHKB-CPT1BH3BT56 60 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 H3BUX3 64 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 PFN2P35080 140 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 Q0VFX4 171 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 FAM167A-AS1Q96KT0 104 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 CCDC140Q96MF4 163 aa6.56□□□□□ -1.36
HTT-208ENST00000510626 C16orf74Q96GX8 76 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 FANCD2OSQ96PS1 177 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 CNFNQ9BYD5 112 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 SELENOKQ9Y6D0 94 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 CRYGBP07316 175 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 MLANAQ16655 118 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 C19orf71A6NCJ1 209 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 NRACQ8N912 160 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 C11orf1Q9H5F2 150 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 C2orf70A6NJV1 201 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 TRBV10-1A0A0K0K1A3 114 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 OVOL3O00110 214 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 DEFB131AP59861 70 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 K7EQD1 137 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 KLHL30-AS1Q8NEE0 82 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 CDPF1Q6NVV7 123 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 BCE1O60756 84 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 ZNF581Q9P0T4 197 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 TRAV26-2A0A0B4J265 109 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 COX7CP15954 63 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 BAALCQ8WXS3 180 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 SPRY4Q9C004 299 aa6.55□□□□□ -1.36
HTT-208ENST00000510626 DAD1P61803 113 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 RNF144BQ7Z419 303 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 TRBV7-3A0A075B6L6 115 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 FAM236DA0A1B0GTK5 79 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 K7EMT4 169 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 FAM236CP0DP71 79 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 LYPD6Q86Y78 171 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 TMEM61Q8N0U2 210 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 A0A1B0GW54 56 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 MSMBP08118 114 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 A0A0G2JNJ9 132 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 TINCRA0A1B0GVN0 87 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 CD24P25063 80 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 UBE2AP49459 152 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 Q9UFV3 132 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 U3KQK5 164 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 COX7A2LO14548 114 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 LOXP28300 417 aaPredicted RBP6.54□□□□□ -1.36
HTT-208ENST00000510626 COX7B2Q8TF08 81 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 PSCAO43653 123 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 LINC00526Q96FQ7 95 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 BLCAPP62952 87 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 WDR86Q86TI4 376 aa6.54□□□□□ -1.36
HTT-208ENST00000510626 UBE2DNLQ8IWF7 75 aa6.53□□□□□ -1.36
HTT-208ENST00000510626 TDRG1Q3Y452 100 aa6.53□□□□□ -1.36
HTT-208ENST00000510626 TRAV25A0A0B4J276 109 aa6.53□□□□□ -1.36
HTT-208ENST00000510626 COX17Q14061 63 aa6.53□□□□□ -1.36
HTT-208ENST00000510626 ZNRF2Q8NHG8 242 aa6.53□□□□□ -1.36
HTT-208ENST00000510626 SERP1Q9Y6X1 66 aa6.53□□□□□ -1.36
HTT-208ENST00000510626 RSPO1Q2MKA7 263 aaPredicted RBP6.53□□□□□ -1.36
HTT-208ENST00000510626 K7EIM0 57 aa6.53□□□□□ -1.36
HTT-208ENST00000510626 I3L2K1 104 aa6.53□□□□□ -1.36
HTT-208ENST00000510626 HIGD2BQ4VC39 106 aa6.53□□□□□ -1.36
HTT-208ENST00000510626 PROP1O75360 226 aa6.52□□□□□ -1.36
HTT-208ENST00000510626 E7EQL1 145 aa6.52□□□□□ -1.37
HTT-208ENST00000510626 P0C879 139 aa6.52□□□□□ -1.37
HTT-208ENST00000510626 AGPAT4-IT1Q9H0P7 198 aa6.52□□□□□ -1.37
HTT-208ENST00000510626 UPK3BQ9BT76 320 aa6.52□□□□□ -1.37
HTT-208ENST00000510626 SPTBN4Q9H254 2564 aa6.52□□□□□ -1.37
HTT-208ENST00000510626 TMEM89A2RUT3 159 aa6.52□□□□□ -1.37
HTT-208ENST00000510626 IGKV1-17P01599 117 aa6.52□□□□□ -1.37
HTT-208ENST00000510626 SPINK13Q1W4C9 94 aa6.52□□□□□ -1.37
HTT-208ENST00000510626 ETDCA0A1B0GVM5 59 aa6.52□□□□□ -1.37
HTT-208ENST00000510626 A0A1W2PRX2 142 aa6.52□□□□□ -1.37
HTT-208ENST00000510626 COL5A1P20908 1838 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms