RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 H3BVH4 76 aa8.29□□□□□ -1.08
SH3RF1-203ENST00000508685 S100A4P26447 101 aaKnown RBP8.29□□□□□ -1.08
SH3RF1-203ENST00000508685 SUMO2P61956 95 aaKnown RBP8.29□□□□□ -1.08
SH3RF1-203ENST00000508685 TOMM6Q96B49 74 aa8.29□□□□□ -1.08
SH3RF1-203ENST00000508685 DAZ1Q9NQZ3 744 aaKnown RBP8.29□□□□□ -1.08
SH3RF1-203ENST00000508685 TCTAP57738 103 aa8.29□□□□□ -1.08
SH3RF1-203ENST00000508685 RPL11P62913 178 aaKnown RBP8.29□□□□□ -1.08
SH3RF1-203ENST00000508685 ZFAND2AQ8N6M9 145 aa8.29□□□□□ -1.08
SH3RF1-203ENST00000508685 PHLDA3Q9Y5J5 127 aa8.29□□□□□ -1.08
SH3RF1-203ENST00000508685 NIPBLQ6KC79 2804 aaeCLIP8.28□□□□□ -1.08
SH3RF1-203ENST00000508685 SOCS3O14543 225 aa8.28□□□□□ -1.08
SH3RF1-203ENST00000508685 FXYD2P54710 66 aa8.28□□□□□ -1.08
SH3RF1-203ENST00000508685 RPL32P62910 135 aaKnown RBP8.28□□□□□ -1.08
SH3RF1-203ENST00000508685 C20orf173Q96LM9 149 aa8.28□□□□□ -1.08
SH3RF1-203ENST00000508685 FAM19A4Q96LR4 140 aa8.28□□□□□ -1.08
SH3RF1-203ENST00000508685 SCGB3A1Q96QR1 104 aa8.28□□□□□ -1.08
SH3RF1-203ENST00000508685 RHPN1-AS1Q9BWJ2 59 aa8.28□□□□□ -1.08
SH3RF1-203ENST00000508685 CHTOPQ9Y3Y2 248 aaKnown RBP8.28□□□□□ -1.08
SH3RF1-203ENST00000508685 KRTAP1-1Q07627 177 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 POM121L12Q8N7R1 296 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 CSTL1Q9H114 145 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 TRAV26-2A0A0B4J265 109 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 TMEM89A2RUT3 159 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 OR11H12B2RN74 326 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 E9PLD3 99 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 SRD5A1P18405 259 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 DEFB1P60022 68 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 PAPPA-AS1Q5QFB9 102 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 NEXN-AS1Q8NBZ9 246 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 OR11H1Q8NG94 326 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 OR11H2Q8NH07 326 aa8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 PHLDA1Q8WV24 401 aaPredicted RBP8.27□□□□□ -1.09
SH3RF1-203ENST00000508685 ANK3Q12955 4377 aaKnown RBP8.26□□□□□ -1.09
SH3RF1-203ENST00000508685 PRR9Q5T870 116 aa8.26□□□□□ -1.09
SH3RF1-203ENST00000508685 RASL10AQ92737 203 aa8.26□□□□□ -1.09
SH3RF1-203ENST00000508685 F8W1H4 67 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 K7EMT4 169 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 HIST2H2BDQ6DRA6 164 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 NHP2Q9NX24 153 aaKnown RBP8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 IGHV4OR15-8A0A075B7B6 117 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 A0A087WW49 117 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 MYMXA0A1B0GTQ4 84 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 NXPH4O95158 308 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 ELANEP08246 267 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 LGALS1P09382 135 aaKnown RBP8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 ID1P41134 155 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 ANXA2RQ3ZCQ2 193 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 C18orf65Q6ZTR6 163 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 Q8N2B8 174 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 HIST1H4GQ99525 98 aa8.25□□□□□ -1.09
SH3RF1-203ENST00000508685 DNAJC9-AS1A6NH13 148 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 IGLL5B9A064 214 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 SYNJ2BPP57105 145 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 DEFB136Q30KP8 78 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 C12orf74Q32Q52 190 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 FOXI2Q6ZQN5 318 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 Q6ZQT7 251 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 MAPKAPK5-AS1Q8N8E1 139 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 UBE2E2Q96LR5 201 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 SMR3AQ99954 134 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 NAA38Q9BRA0 125 aaKnown RBP8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 ESM1Q9NQ30 184 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 A0A1B0GWB2 263 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 F6UB75 175 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 J3QR89 54 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 SAP30O75446 220 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 RNASE4P34096 147 aaKnown RBP8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 C2orf66Q6UXQ4 117 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 C14orf178Q8N769 122 aaPredicted RBP8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 RNF152Q8N8N0 203 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 TTTY13Q9BZ97 58 aa8.24□□□□□ -1.09
SH3RF1-203ENST00000508685 TMEM238LA0A1B0GVL6 79 aa8.23□□□□□ -1.09
SH3RF1-203ENST00000508685 A6NJY4 79 aa8.23□□□□□ -1.09
SH3RF1-203ENST00000508685 LY6G6DO95868 133 aa8.23□□□□□ -1.09
SH3RF1-203ENST00000508685 HOXD3P31249 432 aaPredicted RBP8.23□□□□□ -1.09
SH3RF1-203ENST00000508685 ZNF479Q96JC4 524 aa8.23□□□□□ -1.09
SH3RF1-203ENST00000508685 YAE1D1Q9NRH1 226 aa8.23□□□□□ -1.09
SH3RF1-203ENST00000508685 CYSLTR1Q9Y271 337 aa8.23□□□□□ -1.09
SH3RF1-203ENST00000508685 TRBV7-3A0A075B6L6 115 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 J3KRW8 73 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 TCTEX1D4Q5JR98 221 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 BAALCQ8WXS3 180 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 ODF3Q96PU9 254 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 KLLNB2CW77 178 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 VCYO14598 125 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 MGPP08493 103 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 RNASE3P12724 160 aaKnown RBP8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 HERVK_113P61574 105 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 FAM159AQ6UWV7 190 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 Q6ZSV7 163 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 DCANP1Q8TF63 244 aa8.22□□□□□ -1.09
SH3RF1-203ENST00000508685 NSD1Q96L73 2696 aaPredicted RBP8.21□□□□□ -1.09
SH3RF1-203ENST00000508685 HIVEP2P31629 2446 aa8.21□□□□□ -1.09
SH3RF1-203ENST00000508685 PRSS29PA6NIE9 313 aa8.21□□□□□ -1.1
SH3RF1-203ENST00000508685 SCGB2A2Q13296 93 aa8.21□□□□□ -1.1
SH3RF1-203ENST00000508685 RRN3P1Q2M238 152 aa8.21□□□□□ -1.1
SH3RF1-203ENST00000508685 KHDC1LQ5JSQ8 128 aa8.21□□□□□ -1.1
SH3RF1-203ENST00000508685 TMEM86BQ8N661 226 aa8.21□□□□□ -1.1
SH3RF1-203ENST00000508685 TEX29Q8N6K0 151 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms