RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 CFAP54Q96N23 3096 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 PDE4DIPQ5VU43 2346 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 HELZP42694 1942 aaKnown RBP-0.26□□□□□ -2.45
GYPB-209ENST00000508618 KIDINS220Q9ULH0 1771 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 TET3O43151 1660 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 DNAH10Q8IVF4 4471 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 SOGA1O94964 1423 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 TRBV27A0A0K0K1C4 114 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 M0R2T5 61 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 CDC42EP2O14613 210 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 TPST1O60507 370 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 IGKCP01834 107 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 BCL2P10415 239 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 FABP2P12104 132 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 IL7P13232 177 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 ETV6P41212 452 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 DSCR8Q96T75 97 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 BOLA2Q9H3K6 86 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 BIN3Q9NQY0 253 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 LAMTOR2Q9Y2Q5 125 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 USP34Q70CQ2 3546 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 BRCA2P51587 3418 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 DNAH6Q9C0G6 4158 aa-0.26□□□□□ -2.45
GYPB-209ENST00000508618 TRIOO75962 3097 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 ARFGEF1Q9Y6D6 1849 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 CHD7Q9P2D1 2997 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 ZNF142P52746 1687 aaPredicted RBP-0.27□□□□□ -2.45
GYPB-209ENST00000508618 WDR97A6NE52 1622 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 SMARCA2P51531 1590 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 SPENQ96T58 3664 aaKnown RBP-0.27□□□□□ -2.45
GYPB-209ENST00000508618 ROCK1Q13464 1354 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 A0A0G2JMM0 328 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 EDF1O60869 148 aaKnown RBP-0.27□□□□□ -2.45
GYPB-209ENST00000508618 PFDN1O60925 122 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 MT1BP07438 61 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 MPC1LP0DKB6 136 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 SDC4P31431 198 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 SDC2P34741 201 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 LSM3P62310 102 aaKnown RBP-0.27□□□□□ -2.45
GYPB-209ENST00000508618 COX6A2Q02221 97 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 SPCS2Q15005 226 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 RHOHQ15669 191 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 STX19Q8N4C7 294 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 MORN4Q8NDC4 146 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 PPP1R1CQ8WVI7 109 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 CARD19Q96LW7 228 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 PRR15LQ9BU68 103 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 FKBP11Q9NYL4 201 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 COMMD3Q9UBI1 195 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.27□□□□□ -2.45
GYPB-209ENST00000508618 ASPMQ8IZT6 3477 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 PARP14Q460N5 1801 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 KIF13AQ9H1H9 1805 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 DNAH2Q9P225 4427 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 SPTBN1Q01082 2364 aaKnown RBP-0.27□□□□□ -2.45
GYPB-209ENST00000508618 DCHS2Q6V1P9 2916 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 DOPEY2Q9Y3R5 2298 aa-0.27□□□□□ -2.45
GYPB-209ENST00000508618 SLIT1O75093 1534 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 CEP350Q5VT06 3117 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 CPDO75976 1380 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 MUC3AQ02505 3323 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 TRBV7-6A0A0J9YX20 115 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 LCE6AA0A183 80 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 TMEM189A5PLL7 270 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 F2Z2F3 143 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 GABARAPH6UMI1 98 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 MRPS15P82914 257 aaKnown RBP-0.28□□□□□ -2.45
GYPB-209ENST00000508618 LYPD5Q6UWN5 251 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 SMIM20Q8N5G0 67 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 FAM24BQ8N5W8 94 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 TEX29Q8N6K0 151 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 ATG5Q9H1Y0 275 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 MED11Q9P086 117 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 DNAJC13O75165 2243 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 SPAG17Q6Q759 2223 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 DNAH14Q0VDD8 3507 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 DMXL1Q9Y485 3027 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 BIVM-ERCC5R4GMW8 1640 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 SSC5DA1L4H1 1573 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 SYNMO15061 1565 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 ERCC6L2Q5T890 1561 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 SETBP1Q9Y6X0 1596 aa-0.28□□□□□ -2.45
GYPB-209ENST00000508618 AKAP11Q9UKA4 1901 aa-0.28□□□□□ -2.46
GYPB-209ENST00000508618 PLCE1Q9P212 2302 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 HTTP42858 3142 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 PKDREJQ9NTG1 2253 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 ATMQ13315 3056 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 PTPRGP23470 1445 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 FAM135BQ49AJ0 1406 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 PHIPQ8WWQ0 1821 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 COL4A6Q14031 1691 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 TRAV12-2A0A075B6T6 113 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.29□□□□□ -2.46
GYPB-209ENST00000508618 TEX49A0A1B0GTD5 131 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 C10orf142B7Z368 130 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 PPP5D1E7EU14 171 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 FAM107AO95990 144 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 TFF1P04155 84 aa-0.29□□□□□ -2.46
GYPB-209ENST00000508618 GTF2A1P52655 376 aaPredicted RBP-0.29□□□□□ -2.46
GYPB-209ENST00000508618 TAS2R41P59536 307 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms