RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 Q9H8V8 135 aa12.53□□□□□ -0.4
PDLIM7-216ENST00000506537 BIN3Q9NQY0 253 aa12.53□□□□□ -0.4
PDLIM7-216ENST00000506537 NBDYA0A0U1RRE5 68 aa12.52□□□□□ -0.41
PDLIM7-216ENST00000506537 FAM74A4Q5TZK3 123 aa12.52□□□□□ -0.41
PDLIM7-216ENST00000506537 C14orf178Q8N769 122 aaPredicted RBP12.52□□□□□ -0.41
PDLIM7-216ENST00000506537 RNASE7Q9H1E1 156 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-216ENST00000506537 Q9UF83 564 aa12.52□□□□□ -0.41
PDLIM7-216ENST00000506537 C9JQL5 133 aa12.51□□□□□ -0.41
PDLIM7-216ENST00000506537 RHODO00212 210 aa12.51□□□□□ -0.41
PDLIM7-216ENST00000506537 RPS20P60866 119 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-216ENST00000506537 SRSF3P84103 164 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-216ENST00000506537 SMIM7Q9BQ49 75 aa12.51□□□□□ -0.41
PDLIM7-216ENST00000506537 PRADC1Q9BSG0 188 aa12.51□□□□□ -0.41
PDLIM7-216ENST00000506537 KRTAP1-5Q9BYS1 174 aa12.51□□□□□ -0.41
PDLIM7-216ENST00000506537 RTL8CO15255 209 aa12.5□□□□□ -0.41
PDLIM7-216ENST00000506537 LINC00694P0DN24 101 aa12.5□□□□□ -0.41
PDLIM7-216ENST00000506537 FER1L6-AS1Q8NA97 138 aa12.5□□□□□ -0.41
PDLIM7-216ENST00000506537 SSTP61278 116 aa12.49□□□□□ -0.41
PDLIM7-216ENST00000506537 SPANXN1Q5VSR9 72 aa12.49□□□□□ -0.41
PDLIM7-216ENST00000506537 TPPP3Q9BW30 176 aa12.49□□□□□ -0.41
PDLIM7-216ENST00000506537 RPP21Q9H633 154 aaKnown RBP12.49□□□□□ -0.41
PDLIM7-216ENST00000506537 LY96Q9Y6Y9 160 aa12.49□□□□□ -0.41
PDLIM7-216ENST00000506537 XKRY2A2RUG3 117 aa12.47□□□□□ -0.41
PDLIM7-216ENST00000506537 ZNF727A8MUV8 499 aa12.47□□□□□ -0.41
PDLIM7-216ENST00000506537 SH2D6Q7Z4S9 175 aa12.47□□□□□ -0.41
PDLIM7-216ENST00000506537 LINC01551Q86U37 167 aa12.47□□□□□ -0.41
PDLIM7-216ENST00000506537 GAGE12JA6NER3 117 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 SIVA1O15304 175 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 CTRLP40313 264 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 TIRAPP58753 221 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 GAGE1Q13065 139 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 GAGE4Q13068 117 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 GAGE5Q13069 117 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 GAGE13Q4V321 117 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 LYZL1Q6UWQ5 148 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 FAM231DQ6ZW35 169 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 WFDC10BQ8IUB3 73 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 MSRB1Q9NZV6 116 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 KIF25-AS1Q9Y6Z4 181 aa12.46□□□□□ -0.41
PDLIM7-216ENST00000506537 PKD1P98161 4303 aa12.46□□□□□ -0.42
PDLIM7-216ENST00000506537 AP1S3Q96PC3 154 aa12.45□□□□□ -0.42
PDLIM7-216ENST00000506537 A0A1W2PPQ1 181 aa12.44□□□□□ -0.42
PDLIM7-216ENST00000506537 F2Z2F3 143 aa12.44□□□□□ -0.42
PDLIM7-216ENST00000506537 GATCO43716 136 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-216ENST00000506537 LINC00315P59091 139 aa12.44□□□□□ -0.42
PDLIM7-216ENST00000506537 CACNG7P62955 275 aa12.44□□□□□ -0.42
PDLIM7-216ENST00000506537 PEA15Q15121 130 aa12.44□□□□□ -0.42
PDLIM7-216ENST00000506537 C1orf134Q5TEV5 83 aa12.44□□□□□ -0.42
PDLIM7-216ENST00000506537 ATP6V0E2Q8NHE4 81 aa12.44□□□□□ -0.42
PDLIM7-216ENST00000506537 GTSF1Q8WW33 167 aa12.44□□□□□ -0.42
PDLIM7-216ENST00000506537 DNAH11Q96DT5 4516 aa12.44□□□□□ -0.42
PDLIM7-216ENST00000506537 RAB4BP61018 213 aa12.43□□□□□ -0.42
PDLIM7-216ENST00000506537 ZNF56Q15929 161 aa12.43□□□□□ -0.42
PDLIM7-216ENST00000506537 TTC32Q5I0X7 151 aa12.43□□□□□ -0.42
PDLIM7-216ENST00000506537 ERVFC1-1P60608 527 aa12.42□□□□□ -0.42
PDLIM7-216ENST00000506537 IFITM2Q01629 132 aa12.42□□□□□ -0.42
PDLIM7-216ENST00000506537 LINC00336Q6ZUF6 198 aa12.42□□□□□ -0.42
PDLIM7-216ENST00000506537 C6orf223Q8N319 242 aa12.42□□□□□ -0.42
PDLIM7-216ENST00000506537 CNFNQ9BYD5 112 aa12.42□□□□□ -0.42
PDLIM7-216ENST00000506537 GTSF1LQ9H1H1 148 aa12.42□□□□□ -0.42
PDLIM7-216ENST00000506537 SMDT1Q9H4I9 107 aa12.42□□□□□ -0.42
PDLIM7-216ENST00000506537 TRBV10-1A0A0K0K1A3 114 aa12.41□□□□□ -0.42
PDLIM7-216ENST00000506537 RPL23P62829 140 aaKnown RBP12.41□□□□□ -0.42
PDLIM7-216ENST00000506537 FAM74A3Q4VXF1 159 aa12.41□□□□□ -0.42
PDLIM7-216ENST00000506537 CT83Q5H943 113 aa12.41□□□□□ -0.42
PDLIM7-216ENST00000506537 DNAH10OSP0CZ25 163 aa12.4□□□□□ -0.42
PDLIM7-216ENST00000506537 NTF3P20783 257 aa12.4□□□□□ -0.42
PDLIM7-216ENST00000506537 TMEM241Q24JQ0 296 aa12.4□□□□□ -0.42
PDLIM7-216ENST00000506537 LELP1Q5T871 98 aa12.4□□□□□ -0.42
PDLIM7-216ENST00000506537 WDR73Q6P4I2 378 aa12.4□□□□□ -0.42
PDLIM7-216ENST00000506537 NEXN-AS1Q8NBZ9 246 aa12.4□□□□□ -0.42
PDLIM7-216ENST00000506537 ISOC2Q96AB3 205 aa12.4□□□□□ -0.42
PDLIM7-216ENST00000506537 OSTCQ9NRP0 149 aa12.4□□□□□ -0.42
PDLIM7-216ENST00000506537 PKHD1P08F94 4074 aa12.39□□□□□ -0.43
PDLIM7-216ENST00000506537 PRSS29PA6NIE9 313 aa12.39□□□□□ -0.43
PDLIM7-216ENST00000506537 A8MWL6 223 aa12.39□□□□□ -0.43
PDLIM7-216ENST00000506537 SMIM17P0DL12 118 aa12.39□□□□□ -0.43
PDLIM7-216ENST00000506537 EVI2AP22794 236 aa12.39□□□□□ -0.43
PDLIM7-216ENST00000506537 SOHLH1Q5JUK2 328 aa12.39□□□□□ -0.43
PDLIM7-216ENST00000506537 OR10G8Q8NGN5 311 aa12.39□□□□□ -0.43
PDLIM7-216ENST00000506537 NAT8Q9UHE5 227 aa12.39□□□□□ -0.43
PDLIM7-216ENST00000506537 A0A1B0GVY2 172 aa12.38□□□□□ -0.43
PDLIM7-216ENST00000506537 F5H697 171 aa12.38□□□□□ -0.43
PDLIM7-216ENST00000506537 MGPP08493 103 aa12.38□□□□□ -0.43
PDLIM7-216ENST00000506537 UBE2D3P61077 147 aa12.38□□□□□ -0.43
PDLIM7-216ENST00000506537 RAB14P61106 215 aa12.38□□□□□ -0.43
PDLIM7-216ENST00000506537 UBE2D2P62837 147 aa12.38□□□□□ -0.43
PDLIM7-216ENST00000506537 OR10J3Q5JRS4 329 aa12.38□□□□□ -0.43
PDLIM7-216ENST00000506537 CLLU1Q5K131 121 aa12.38□□□□□ -0.43
PDLIM7-216ENST00000506537 V9GYV3 84 aa12.38□□□□□ -0.43
PDLIM7-216ENST00000506537 TRBV7-3A0A075B6L6 115 aa12.37□□□□□ -0.43
PDLIM7-216ENST00000506537 TRGC1P0CF51 173 aa12.37□□□□□ -0.43
PDLIM7-216ENST00000506537 RPL36AP83881 106 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-216ENST00000506537 ADIRFQ15847 76 aa12.37□□□□□ -0.43
PDLIM7-216ENST00000506537 RPL36ALQ969Q0 106 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-216ENST00000506537 PGLYRP4Q96LB8 373 aa12.37□□□□□ -0.43
PDLIM7-216ENST00000506537 TRAV8-6A0A0B4J262 113 aa12.36□□□□□ -0.43
PDLIM7-216ENST00000506537 IGHV3-38A0A0C4DH36 116 aa12.36□□□□□ -0.43
PDLIM7-216ENST00000506537 FOXA3P55318 350 aaPredicted RBP12.36□□□□□ -0.43
PDLIM7-216ENST00000506537 TWIST1Q15672 202 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms