RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 IGKV1D-33P01593 117 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 IGKV1-33P01594 117 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 IGKV1-5P01602 117 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 IGHV3-7P01780 117 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 CRYGDP07320 174 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 SAA1P0DJI8 122 aaPredicted RBP3.54□□□□□ -1.84
NIPBL-205ENST00000505998 H2BFSP57053 126 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 FXYD4P59646 89 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
NIPBL-205ENST00000505998 IL15RAQ13261 267 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 PPP1R1AQ13522 171 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 PMVKQ15126 192 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 ADIRFQ15847 76 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 RTL8BQ17RB0 113 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 ZNF709Q8N972 641 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 OR51G1Q8NGK1 321 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 OR4A5Q8NH83 315 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 MYOZ3Q8TDC0 251 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 TVP23CQ96ET8 276 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 AP1S3Q96PC3 154 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 RARRES2Q99969 163 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 NPVFQ9HCQ7 196 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 TMEM14BQ9NUH8 114 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 ZNF257Q9Y2Q1 563 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 HILPDAQ9Y5L2 63 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 CMYA5Q8N3K9 4069 aa3.54□□□□□ -1.84
NIPBL-205ENST00000505998 FBN1P35555 2871 aaKnown RBP3.53□□□□□ -1.84
NIPBL-205ENST00000505998 C7orf71A4D174 169 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 OR2T8A6NH00 312 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 C9JQL5 133 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 K7EN84 100 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 HRASP01112 189 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 SPINK8P0C7L1 97 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 SEC11BP0C7V7 166 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 SRP14P37108 136 aaKnown RBP3.53□□□□□ -1.84
NIPBL-205ENST00000505998 LPAR6P43657 344 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 REG1BP48304 166 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 NMUP48645 174 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 EMP1P54849 157 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 SEC11AP67812 179 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 SLC35B1P78383 322 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 LCN12Q6JVE5 192 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 SGPP2Q8IWX5 399 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 VSTM2AQ8TAG5 236 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 MAP1LC3AQ9H492 121 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 C11orf1Q9H5F2 150 aa3.53□□□□□ -1.84
NIPBL-205ENST00000505998 DNAH3Q8TD57 4116 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 IGHV3-72A0A0B4J1Y9 119 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 UPK2O00526 184 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 MRPS12O15235 138 aaKnown RBP3.52□□□□□ -1.85
NIPBL-205ENST00000505998 ORM2P19652 201 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 CNTFRP26992 372 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 G6PCP35575 357 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 YPEL3P61236 119 aaPredicted RBP3.52□□□□□ -1.85
NIPBL-205ENST00000505998 PMCHL1Q16048 86 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 ABCA11PQ4W5N1 156 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 ACTL10Q5JWF8 245 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 APRG1Q8IVJ8 170 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 OR51H1Q8NH63 302 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 SGMS2Q8NHU3 365 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 CMTM2Q8TAZ6 248 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 MBD3L1Q8WWY6 194 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 BAALCQ8WXS3 180 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 GGTLC1Q9BX51 225 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 ST20Q9HBF5 79 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 NDUFA4L2Q9NRX3 87 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 LSM5Q9Y4Y9 91 aaKnown RBP3.52□□□□□ -1.85
NIPBL-205ENST00000505998 WNK1Q9H4A3 2382 aa3.52□□□□□ -1.85
NIPBL-205ENST00000505998 TRRAPQ9Y4A5 3859 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 TRBV9A0A0B4J1U6 114 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 TRAV8-6A0A0B4J262 113 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 OR4C46A6NHA9 309 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 E7EUB6 86 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 FNDC10F2Z333 226 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 H3BUA1 57 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 RPL7P18124 248 aaKnown RBP3.51□□□□□ -1.85
NIPBL-205ENST00000505998 NTF3P20783 257 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 PSMB8P28062 276 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 RPL12P30050 165 aaKnown RBP3.51□□□□□ -1.85
NIPBL-205ENST00000505998 PRCDQ00LT1 54 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 VMA21Q3ZAQ7 101 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 DPPA3Q6W0C5 159 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 FAM19A5Q7Z5A7 132 aaPredicted RBP3.51□□□□□ -1.85
NIPBL-205ENST00000505998 OR2K2Q8NGT1 345 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 RNF185Q96GF1 192 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 ATP5SQ99766 215 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 SPIN2AQ99865 258 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 SPIN2BQ9BPZ2 258 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 SCRT1Q9BWW7 348 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 EIF5A2Q9GZV4 153 aaKnown RBP3.51□□□□□ -1.85
NIPBL-205ENST00000505998 FBXL15Q9H469 300 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 RPRMQ9NS64 109 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 PRNDQ9UKY0 176 aa3.51□□□□□ -1.85
NIPBL-205ENST00000505998 VWFP04275 2813 aa3.5□□□□□ -1.85
NIPBL-205ENST00000505998 TRAV3A0A0B4J244 114 aa3.5□□□□□ -1.85
NIPBL-205ENST00000505998 CLPSL1A2RUU4 121 aa3.5□□□□□ -1.85
NIPBL-205ENST00000505998 C9JAW5 83 aa3.5□□□□□ -1.85
NIPBL-205ENST00000505998 TMEM250H0YL14 139 aa3.5□□□□□ -1.85
NIPBL-205ENST00000505998 H3BRM9 83 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms