RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 DEFB4AO15263 64 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 ORM1P02763 201 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 ATP5G1P05496 136 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 SLAQ13239 276 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 C15orf53Q8NAA6 179 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 ZNF479Q96JC4 524 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 TRBV6-5A0A0K0K1A5 114 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 PHOX2AO14813 284 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 SAMD10Q9BYL1 202 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 M0R381 172 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 GZMBP10144 247 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 TRBV10-1A0A0K0K1A3 114 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 TMEM208Q9BTX3 173 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 DNAH8Q96JB1 4490 aa5.74□□□□□ -1.49
CDC42SE2-208ENST00000505065 MGST1P10620 155 aaKnown RBP5.73□□□□□ -1.49
CDC42SE2-208ENST00000505065 ERVFC1-1P60608 527 aa5.73□□□□□ -1.49
CDC42SE2-208ENST00000505065 ZNF876PQ49A33 203 aa5.73□□□□□ -1.49
CDC42SE2-208ENST00000505065 SYT8Q8NBV8 401 aa5.73□□□□□ -1.49
CDC42SE2-208ENST00000505065 A0A096LPF7 62 aa5.73□□□□□ -1.49
CDC42SE2-208ENST00000505065 M0QY20 66 aa5.73□□□□□ -1.49
CDC42SE2-208ENST00000505065 DAD1P61803 113 aa5.73□□□□□ -1.49
CDC42SE2-208ENST00000505065 GRIFINA4D1Z8 144 aa5.73□□□□□ -1.49
CDC42SE2-208ENST00000505065 HIGD1CA8MV81 97 aa5.73□□□□□ -1.49
CDC42SE2-208ENST00000505065 C15orf54Q8N8G6 183 aa5.73□□□□□ -1.49
CDC42SE2-208ENST00000505065 IGHV3OR16-12A0A075B7B8 117 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 PRO0255Q9UI72 69 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 F8W036 122 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 BTF3P20290 206 aaKnown RBP5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 CEBPGP53567 150 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 ADIRFQ15847 76 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 DNAJC30Q96LL9 226 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 MSRB1Q9NZV6 116 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 TRBV24-1A0A075B6N3 115 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 DEFB131BA0A096LNP1 70 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 NTF3P20783 257 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 NRACQ8N912 160 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 DAZAP1Q96EP5 407 aaKnown RBP5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 JPT2Q9H910 190 aa5.72□□□□□ -1.49
CDC42SE2-208ENST00000505065 TRGV1A0A0A0MS02 117 aa5.71□□□□□ -1.49
CDC42SE2-208ENST00000505065 GAGE12BA1L429 117 aa5.71□□□□□ -1.49
CDC42SE2-208ENST00000505065 C7orf77A4D0Y5 90 aa5.71□□□□□ -1.49
CDC42SE2-208ENST00000505065 K7EQD1 137 aa5.71□□□□□ -1.49
CDC42SE2-208ENST00000505065 GAGE7O76087 117 aa5.71□□□□□ -1.49
CDC42SE2-208ENST00000505065 GAGE12FP0CL80 117 aa5.71□□□□□ -1.49
CDC42SE2-208ENST00000505065 GAGE12GP0CL81 117 aa5.71□□□□□ -1.49
CDC42SE2-208ENST00000505065 GAGE12IP0CL82 117 aa5.71□□□□□ -1.49
CDC42SE2-208ENST00000505065 LGALS9CQ6DKI2 356 aa5.71□□□□□ -1.49
CDC42SE2-208ENST00000505065 A0A1B0GUT8 65 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 UBE2D3P61077 147 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 UBE2D2P62837 147 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 SLC25A29Q8N8R3 303 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 PGLYRP4Q96LB8 373 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 NAGKQ9UJ70 344 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 TMEM88Q6PEY1 159 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 SLC7A5P1Q8MH63 180 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 M0R036 132 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 MT-ND4LP03901 98 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 SVBPQ8N300 66 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 AP1S3Q96PC3 154 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 GTSF1LQ9H1H1 148 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 DPH3P1Q9H4G8 78 aa5.71□□□□□ -1.5
CDC42SE2-208ENST00000505065 RAB4AP20338 218 aa5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 SH2D6Q7Z4S9 175 aa5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 C14orf178Q8N769 122 aaPredicted RBP5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 MRAP2Q96G30 205 aa5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 PHLDA3Q9Y5J5 127 aa5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 TENM2Q9NT68 2774 aa5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 ATRAIDQ6UW56 229 aa5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 HHLA3Q9XRX5 114 aa5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 MRPS16Q9Y3D3 137 aaKnown RBP5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 IGLV2-18A0A075B6J9 118 aa5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 ELOBQ15370 118 aa5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 TMEM136Q6ZRR5 245 aa5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 NEXN-AS1Q8NBZ9 246 aa5.7□□□□□ -1.5
CDC42SE2-208ENST00000505065 SNAPINO95295 136 aa5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 TRGC1P0CF51 173 aa5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 Q9UF83 564 aa5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 FAM104BQ5XKR9 115 aa5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 SUMO4Q6EEV6 95 aa5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 RHOHQ15669 191 aa5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 Q6ZR54 194 aa5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 OR4C5Q8NGB2 326 aa5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 KLK5Q9Y337 293 aaPredicted RBP5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 DNAH5Q8TE73 4624 aa5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 LCE6AA0A183 80 aa5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 GNB1LQ9BYB4 327 aa5.69□□□□□ -1.5
CDC42SE2-208ENST00000505065 TMSB15BA0A087X1C1 80 aa5.68□□□□□ -1.5
CDC42SE2-208ENST00000505065 POLR2KP53803 58 aaKnown RBP5.68□□□□□ -1.5
CDC42SE2-208ENST00000505065 LINC00476Q8WZB0 136 aa5.68□□□□□ -1.5
CDC42SE2-208ENST00000505065 HBBP68871 147 aa5.68□□□□□ -1.5
CDC42SE2-208ENST00000505065 RIGQ13278 110 aa5.68□□□□□ -1.5
CDC42SE2-208ENST00000505065 EVI2AP22794 236 aa5.68□□□□□ -1.5
CDC42SE2-208ENST00000505065 BTF3L4Q96K17 158 aa5.68□□□□□ -1.5
CDC42SE2-208ENST00000505065 ZNRF2Q8NHG8 242 aa5.67□□□□□ -1.5
CDC42SE2-208ENST00000505065 LAMTOR2Q9Y2Q5 125 aa5.67□□□□□ -1.5
CDC42SE2-208ENST00000505065 DYNC1H1Q14204 4646 aaKnown RBP5.67□□□□□ -1.5
CDC42SE2-208ENST00000505065 TRBV27A0A0K0K1C4 114 aa5.67□□□□□ -1.5
CDC42SE2-208ENST00000505065 K7EP13 123 aa5.67□□□□□ -1.5
CDC42SE2-208ENST00000505065 DEFB130BP0DP73 79 aa5.67□□□□□ -1.5
CDC42SE2-208ENST00000505065 DEFB130AP0DP74 79 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms