RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 FAM104BQ5XKR9 115 aa6.74□□□□□ -1.33
TPM3-218ENST00000505010 C14orf178Q8N769 122 aaPredicted RBP6.74□□□□□ -1.33
TPM3-218ENST00000505010 SPXQ9BT56 116 aa6.74□□□□□ -1.33
TPM3-218ENST00000505010 MRPL16Q9NX20 251 aaKnown RBP6.74□□□□□ -1.33
TPM3-218ENST00000505010 STARD9Q9P2P6 4700 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 HIST1H2BKO60814 126 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 HIST1H2BJP06899 126 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 HIST1H2BOP23527 126 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 SRIP30626 198 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 HIST1H2BBP33778 126 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 HIST1H2BDP58876 126 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 HIST1H2BCP62807 126 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 HIST2H2BEQ16778 126 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 MRPL51Q4U2R6 128 aaKnown RBP6.73□□□□□ -1.33
TPM3-218ENST00000505010 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.73□□□□□ -1.33
TPM3-218ENST00000505010 FAM74A4Q5TZK3 123 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 IL17DQ8TAD2 202 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 HIST1H2BHQ93079 126 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 HIST1H2BNQ99877 126 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 HIST1H2BMQ99879 126 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 DPH3P1Q9H4G8 78 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 X6R8D5 127 aa6.73□□□□□ -1.33
TPM3-218ENST00000505010 NACAE9PAV3 2078 aa6.72□□□□□ -1.33
TPM3-218ENST00000505010 A0A087WWL8 130 aa6.72□□□□□ -1.33
TPM3-218ENST00000505010 TRGV1A0A0A0MS02 117 aa6.72□□□□□ -1.33
TPM3-218ENST00000505010 NCR2O95944 276 aa6.72□□□□□ -1.33
TPM3-218ENST00000505010 EMP1P54849 157 aa6.72□□□□□ -1.33
TPM3-218ENST00000505010 Q6ZWC4 215 aa6.72□□□□□ -1.33
TPM3-218ENST00000505010 OR11H2Q8NH07 326 aa6.72□□□□□ -1.33
TPM3-218ENST00000505010 RNF185Q96GF1 192 aa6.72□□□□□ -1.33
TPM3-218ENST00000505010 JPT2Q9H910 190 aa6.72□□□□□ -1.33
TPM3-218ENST00000505010 NOP10Q9NPE3 64 aaKnown RBP6.72□□□□□ -1.33
TPM3-218ENST00000505010 PLAC8L1A1L4L8 177 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 SMIM9A6NGZ8 99 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 D6R8Y8 96 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 SMKR1H3BMG3 65 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 S100A6P06703 90 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 RAB4AP20338 218 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 CKS2P33552 79 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 NDUFA6P56556 154 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 ORMDL3Q8N138 153 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 PTH2Q96A98 100 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 RNF183Q96D59 192 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 ALKBH7Q9BT30 221 aaPredicted RBP6.71□□□□□ -1.34
TPM3-218ENST00000505010 RETNQ9HD89 108 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 RYR1P21817 5038 aa6.71□□□□□ -1.34
TPM3-218ENST00000505010 TRAV26-2A0A0B4J265 109 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 IGHV4-28A0A0C4DH34 117 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 A8MWV9 139 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 F5H697 171 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 DAZ2Q13117 558 aaKnown RBP6.7□□□□□ -1.34
TPM3-218ENST00000505010 ZNF56Q15929 161 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 IQCJQ1A5X6 159 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 Q6ZTI0 123 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 MRAP2Q96G30 205 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 PRELID3AQ96N28 172 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 SAMD10Q9BYL1 202 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 KIF25-AS1Q9Y6Z4 181 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 HERC2O95714 4834 aa6.7□□□□□ -1.34
TPM3-218ENST00000505010 IGHV3-73A0A0B4J1V6 119 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 GAGE12BA1L429 117 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 DEFB4AO15263 64 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 GAGE7O76087 117 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 PPBPP02775 128 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 GAGE12FP0CL80 117 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 GAGE12GP0CL81 117 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 GAGE12IP0CL82 117 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 MIFP14174 115 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 LGALS9BQ3B8N2 356 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 PIK3CD-AS1Q5SR53 167 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 CFAP126Q5VTH2 177 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 SUMO4Q6EEV6 95 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 ZFAND6Q6FIF0 208 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 BAGE3Q86Y29 109 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 C18orf32Q8TCD1 76 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 RASL10AQ92737 203 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 NDUFAF3Q9BU61 184 aa6.69□□□□□ -1.34
TPM3-218ENST00000505010 TRGV2A0A075B6R0 118 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 RHODO00212 210 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 RS1O15537 224 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 GAS8-AS1O95177 125 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 NPYP01303 97 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 IGHV3-53P01767 116 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 CRYGDP07320 174 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 GATA1P15976 413 aaPredicted RBP6.68□□□□□ -1.34
TPM3-218ENST00000505010 LINC00315P59091 139 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 OR10J3Q5JRS4 329 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 Q8NAQ8 132 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 OR4C5Q8NGB2 326 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 OVOL2Q9BRP0 275 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 TP53TG1Q9Y2A0 90 aa6.68□□□□□ -1.34
TPM3-218ENST00000505010 TRAV4A0A0B4J268 109 aa6.67□□□□□ -1.34
TPM3-218ENST00000505010 LOC389332A0A1B0GUA5 103 aa6.67□□□□□ -1.34
TPM3-218ENST00000505010 TNFRSF6BO95407 300 aa6.67□□□□□ -1.34
TPM3-218ENST00000505010 SNRPEP62304 92 aaKnown RBP6.67□□□□□ -1.34
TPM3-218ENST00000505010 Q0VG73 95 aa6.67□□□□□ -1.34
TPM3-218ENST00000505010 RNASEKQ6P5S7 137 aaKnown RBP6.67□□□□□ -1.34
TPM3-218ENST00000505010 POM121L12Q8N7R1 296 aa6.67□□□□□ -1.34
TPM3-218ENST00000505010 MAP1LC3AQ9H492 121 aa6.67□□□□□ -1.34
TPM3-218ENST00000505010 PLECQ15149 4684 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms