RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 SUMO4Q6EEV6 95 aa16.59■□□□□ 0.25
PCDH1-204ENST00000503492 C2orf91Q6ZV80 131 aa16.59■□□□□ 0.25
PCDH1-204ENST00000503492 RBMY1BA6NDE4 496 aaKnown RBP16.59■□□□□ 0.25
PCDH1-204ENST00000503492 RBMY1EA6NEQ0 496 aaKnown RBP16.59■□□□□ 0.25
PCDH1-204ENST00000503492 RBMY1DP0C7P1 496 aaKnown RBP16.59■□□□□ 0.25
PCDH1-204ENST00000503492 CSTL1Q9H114 145 aa16.58■□□□□ 0.25
PCDH1-204ENST00000503492 K7EMI3 77 aa16.58■□□□□ 0.24
PCDH1-204ENST00000503492 CD28P10747 220 aa16.58■□□□□ 0.24
PCDH1-204ENST00000503492 HHLA3Q9XRX5 114 aa16.58■□□□□ 0.24
PCDH1-204ENST00000503492 A0A1W2PRX2 142 aa16.57■□□□□ 0.24
PCDH1-204ENST00000503492 TOMM6Q96B49 74 aa16.57■□□□□ 0.24
PCDH1-204ENST00000503492 MAP6D1Q9H9H5 199 aa16.57■□□□□ 0.24
PCDH1-204ENST00000503492 CD300EQ496F6 205 aaPredicted RBP16.57■□□□□ 0.24
PCDH1-204ENST00000503492 SYT8Q8NBV8 401 aa16.57■□□□□ 0.24
PCDH1-204ENST00000503492 IGKCP01834 107 aa16.56■□□□□ 0.24
PCDH1-204ENST00000503492 NEGR1Q7Z3B1 354 aa16.56■□□□□ 0.24
PCDH1-204ENST00000503492 ACANP16112 2415 aa16.56■□□□□ 0.24
PCDH1-204ENST00000503492 HELZ2Q9BYK8 2649 aaKnown RBP16.56■□□□□ 0.24
PCDH1-204ENST00000503492 F5H697 171 aa16.56■□□□□ 0.24
PCDH1-204ENST00000503492 FAM74A4Q5TZK3 123 aa16.56■□□□□ 0.24
PCDH1-204ENST00000503492 BOD1L2Q8IYS8 172 aa16.56■□□□□ 0.24
PCDH1-204ENST00000503492 FHL3Q13643 280 aa16.55■□□□□ 0.24
PCDH1-204ENST00000503492 BVES-AS1Q5T3Y7 98 aa16.55■□□□□ 0.24
PCDH1-204ENST00000503492 TMEM208Q9BTX3 173 aa16.55■□□□□ 0.24
PCDH1-204ENST00000503492 TRGV11A0A075B6L2 103 aa16.55■□□□□ 0.24
PCDH1-204ENST00000503492 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.55■□□□□ 0.24
PCDH1-204ENST00000503492 CRYGDP07320 174 aa16.55■□□□□ 0.24
PCDH1-204ENST00000503492 MRPL35Q9NZE8 188 aaKnown RBP16.55■□□□□ 0.24
PCDH1-204ENST00000503492 CBY3A6NI87 242 aa16.54■□□□□ 0.24
PCDH1-204ENST00000503492 DPM2O94777 84 aa16.54■□□□□ 0.24
PCDH1-204ENST00000503492 RNASE1P07998 156 aaKnown RBP16.53■□□□□ 0.24
PCDH1-204ENST00000503492 POLR2KP53803 58 aaKnown RBP16.53■□□□□ 0.24
PCDH1-204ENST00000503492 RPL32P62910 135 aaKnown RBP16.53■□□□□ 0.24
PCDH1-204ENST00000503492 SCGB3A1Q96QR1 104 aa16.53■□□□□ 0.24
PCDH1-204ENST00000503492 ZNF256Q9Y2P7 627 aaPredicted RBP16.53■□□□□ 0.24
PCDH1-204ENST00000503492 CUBNO60494 3623 aa16.53■□□□□ 0.24
PCDH1-204ENST00000503492 A0A087WX48 190 aa16.53■□□□□ 0.24
PCDH1-204ENST00000503492 CCL24O00175 119 aa16.53■□□□□ 0.24
PCDH1-204ENST00000503492 NMUP48645 174 aa16.53■□□□□ 0.24
PCDH1-204ENST00000503492 C2orf66Q6UXQ4 117 aa16.53■□□□□ 0.24
PCDH1-204ENST00000503492 PCP2Q8IVA1 136 aa16.53■□□□□ 0.24
PCDH1-204ENST00000503492 LINC01006Q8NI28 216 aa16.53■□□□□ 0.24
PCDH1-204ENST00000503492 C12orf54Q6X4T0 127 aa16.52■□□□□ 0.24
PCDH1-204ENST00000503492 CITED2Q99967 270 aaPredicted RBP16.52■□□□□ 0.24
PCDH1-204ENST00000503492 ITPR2Q14571 2701 aa16.52■□□□□ 0.24
PCDH1-204ENST00000503492 ZNF876PQ49A33 203 aa16.52■□□□□ 0.23
PCDH1-204ENST00000503492 ANK3Q12955 4377 aaKnown RBP16.52■□□□□ 0.23
PCDH1-204ENST00000503492 IGKV2D-26A0A0A0MRZ7 120 aa16.51■□□□□ 0.23
PCDH1-204ENST00000503492 HTN1P15515 57 aa16.51■□□□□ 0.23
PCDH1-204ENST00000503492 Q6ZVH6 145 aa16.51■□□□□ 0.23
PCDH1-204ENST00000503492 SPAG8Q99932 426 aaPredicted RBP16.51■□□□□ 0.23
PCDH1-204ENST00000503492 TMEM160Q9NX00 188 aa16.51■□□□□ 0.23
PCDH1-204ENST00000503492 C16orf95Q9H693 158 aa16.51■□□□□ 0.23
PCDH1-204ENST00000503492 DLEU1O43261 78 aa16.5■□□□□ 0.23
PCDH1-204ENST00000503492 ZNF56Q15929 161 aa16.5■□□□□ 0.23
PCDH1-204ENST00000503492 TRAV12-1A0A0B4J245 112 aa16.5■□□□□ 0.23
PCDH1-204ENST00000503492 ZC2HC1BQ5TFG8 222 aa16.5■□□□□ 0.23
PCDH1-204ENST00000503492 MORN3Q6PF18 240 aaPredicted RBP16.5■□□□□ 0.23
PCDH1-204ENST00000503492 DEFB104AQ8WTQ1 72 aa16.5■□□□□ 0.23
PCDH1-204ENST00000503492 M0QY20 66 aa16.49■□□□□ 0.23
PCDH1-204ENST00000503492 PRM2P04554 102 aa16.49■□□□□ 0.23
PCDH1-204ENST00000503492 GTSCR1Q86UQ5 136 aa16.49■□□□□ 0.23
PCDH1-204ENST00000503492 TRBV6-5A0A0K0K1A5 114 aa16.49■□□□□ 0.23
PCDH1-204ENST00000503492 SDHAF1A6NFY7 115 aa16.49■□□□□ 0.23
PCDH1-204ENST00000503492 VCYO14598 125 aa16.48■□□□□ 0.23
PCDH1-204ENST00000503492 NEXN-AS1Q8NBZ9 246 aa16.48■□□□□ 0.23
PCDH1-204ENST00000503492 TSSC4Q9Y5U2 329 aaPredicted RBP16.48■□□□□ 0.23
PCDH1-204ENST00000503492 UNC79Q9P2D8 2635 aa16.47■□□□□ 0.23
PCDH1-204ENST00000503492 ODF3L2Q3SX64 289 aa16.47■□□□□ 0.23
PCDH1-204ENST00000503492 ZFP2Q6ZN57 461 aa16.47■□□□□ 0.23
PCDH1-204ENST00000503492 NF1P21359 2839 aa16.47■□□□□ 0.23
PCDH1-204ENST00000503492 TRAV25A0A0B4J276 109 aa16.46■□□□□ 0.23
PCDH1-204ENST00000503492 H7C1H1 209 aa16.46■□□□□ 0.23
PCDH1-204ENST00000503492 ERASQ7Z444 233 aa16.46■□□□□ 0.23
PCDH1-204ENST00000503492 BAALCQ8WXS3 180 aa16.46■□□□□ 0.23
PCDH1-204ENST00000503492 F8VRH5 84 aa16.46■□□□□ 0.23
PCDH1-204ENST00000503492 GAGE1Q13065 139 aa16.46■□□□□ 0.23
PCDH1-204ENST00000503492 TTTY13Q9BZ97 58 aa16.46■□□□□ 0.23
PCDH1-204ENST00000503492 COX11Q9Y6N1 276 aa16.46■□□□□ 0.23
PCDH1-204ENST00000503492 WNK1Q9H4A3 2382 aa16.46■□□□□ 0.22
PCDH1-204ENST00000503492 TRBV27A0A0K0K1C4 114 aa16.45■□□□□ 0.22
PCDH1-204ENST00000503492 SIVA1O15304 175 aa16.45■□□□□ 0.22
PCDH1-204ENST00000503492 KIR2DL4Q99706 377 aa16.45■□□□□ 0.22
PCDH1-204ENST00000503492 TMEM97Q5BJF2 176 aa16.45■□□□□ 0.22
PCDH1-204ENST00000503492 SMR3AQ99954 134 aa16.45■□□□□ 0.22
PCDH1-204ENST00000503492 CYSLTR1Q9Y271 337 aa16.45■□□□□ 0.22
PCDH1-204ENST00000503492 CHTOPQ9Y3Y2 248 aaKnown RBP16.45■□□□□ 0.22
PCDH1-204ENST00000503492 PLNP26678 52 aa16.44■□□□□ 0.22
PCDH1-204ENST00000503492 NPSP0C0P6 89 aa16.44■□□□□ 0.22
PCDH1-204ENST00000503492 SCGB2A2Q13296 93 aa16.44■□□□□ 0.22
PCDH1-204ENST00000503492 ZNF418Q8TF45 676 aaPredicted RBP16.44■□□□□ 0.22
PCDH1-204ENST00000503492 TP53TG1Q9Y2A0 90 aa16.44■□□□□ 0.22
PCDH1-204ENST00000503492 HILS1P60008 231 aa16.43■□□□□ 0.22
PCDH1-204ENST00000503492 TRPT1Q86TN4 253 aaKnown RBP16.43■□□□□ 0.22
PCDH1-204ENST00000503492 ORAOV1Q8WV07 137 aa16.43■□□□□ 0.22
PCDH1-204ENST00000503492 MTORP42345 2549 aa16.42■□□□□ 0.22
PCDH1-204ENST00000503492 TAX1BP3O14907 124 aa16.42■□□□□ 0.22
PCDH1-204ENST00000503492 TSHBP01222 138 aa16.42■□□□□ 0.22
PCDH1-204ENST00000503492 RPL39P62891 51 aaKnown RBP16.42■□□□□ 0.22
PCDH1-204ENST00000503492 LINC01587Q99440 93 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms