RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 MDFICQ9P1T7 246 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 OR11H12B2RN74 326 aa12.3□□□□□ -0.44
VCAN-204ENST00000502527 SPINK13Q1W4C9 94 aa12.3□□□□□ -0.44
VCAN-204ENST00000502527 CEND1Q8N111 149 aa12.3□□□□□ -0.44
VCAN-204ENST00000502527 OR11H1Q8NG94 326 aa12.3□□□□□ -0.44
VCAN-204ENST00000502527 OR11H2Q8NH07 326 aa12.3□□□□□ -0.44
VCAN-204ENST00000502527 GAGE12BA1L429 117 aa12.3□□□□□ -0.44
VCAN-204ENST00000502527 DEFB113Q30KQ7 82 aa12.3□□□□□ -0.44
VCAN-204ENST00000502527 UFSP1Q6NVU6 142 aa12.3□□□□□ -0.44
VCAN-204ENST00000502527 ZFP2Q6ZN57 461 aa12.3□□□□□ -0.44
VCAN-204ENST00000502527 TRBV6-5A0A0K0K1A5 114 aa12.29□□□□□ -0.44
VCAN-204ENST00000502527 K7EP34 96 aa12.29□□□□□ -0.44
VCAN-204ENST00000502527 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
VCAN-204ENST00000502527 FAM74A4Q5TZK3 123 aa12.29□□□□□ -0.44
VCAN-204ENST00000502527 LRRC75A-AS1Q8N1F1 130 aa12.29□□□□□ -0.44
VCAN-204ENST00000502527 A0A1W2PPM0 123 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 SDHAF1A6NFY7 115 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 KRTAP10-9P60411 292 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 Q5PR19 223 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 ZNF843Q8N446 348 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 NAA38Q9BRA0 125 aaKnown RBP12.28□□□□□ -0.44
VCAN-204ENST00000502527 CST9LQ9H4G1 147 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 TP53TG1Q9Y2A0 90 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 ZNF462Q96JM2 2506 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 TRBV27A0A0K0K1C4 114 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 AMTNQ6UX39 209 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 TMEM141Q96I45 108 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 FBN2P35556 2912 aa12.28□□□□□ -0.44
VCAN-204ENST00000502527 MYMXA0A1B0GTQ4 84 aa12.27□□□□□ -0.45
VCAN-204ENST00000502527 IGIPA6NJ69 53 aa12.27□□□□□ -0.45
VCAN-204ENST00000502527 Q8N2B8 174 aa12.27□□□□□ -0.45
VCAN-204ENST00000502527 FAM208BQ5VWN6 2430 aa12.27□□□□□ -0.45
VCAN-204ENST00000502527 TRGV11A0A075B6L2 103 aa12.26□□□□□ -0.45
VCAN-204ENST00000502527 E9PLD3 99 aa12.26□□□□□ -0.45
VCAN-204ENST00000502527 RBX1P62877 108 aa12.26□□□□□ -0.45
VCAN-204ENST00000502527 LINC01619G3V211 115 aa12.26□□□□□ -0.45
VCAN-204ENST00000502527 CRYGDP07320 174 aa12.26□□□□□ -0.45
VCAN-204ENST00000502527 FABP2P12104 132 aa12.26□□□□□ -0.45
VCAN-204ENST00000502527 RIPPLY3P57055 190 aa12.26□□□□□ -0.45
VCAN-204ENST00000502527 ZNF56Q15929 161 aa12.26□□□□□ -0.45
VCAN-204ENST00000502527 PAPPA-AS1Q5QFB9 102 aa12.26□□□□□ -0.45
VCAN-204ENST00000502527 SAMD5Q5TGI4 173 aa12.26□□□□□ -0.45
VCAN-204ENST00000502527 POLQO75417 2590 aa12.26□□□□□ -0.45
VCAN-204ENST00000502527 M0QY20 66 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 TSHBP01222 138 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 SLURP1P55000 103 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 HIST1H4GQ99525 98 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 TIMM17AQ99595 171 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 NHP2Q9NX24 153 aaKnown RBP12.25□□□□□ -0.45
VCAN-204ENST00000502527 USP24Q9UPU5 2620 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 LRRK2Q5S007 2527 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 PMVKQ15126 192 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 OCIAD2Q56VL3 154 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 TRPT1Q86TN4 253 aaKnown RBP12.25□□□□□ -0.45
VCAN-204ENST00000502527 OR5A1Q8NGJ0 315 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 PRADC1Q9BSG0 188 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 SPCS1Q9Y6A9 102 aa12.25□□□□□ -0.45
VCAN-204ENST00000502527 UBR5O95071 2799 aaPredicted RBP12.24□□□□□ -0.45
VCAN-204ENST00000502527 ZNF876PQ49A33 203 aa12.24□□□□□ -0.45
VCAN-204ENST00000502527 PHLDA1Q8WV24 401 aaPredicted RBP12.24□□□□□ -0.45
VCAN-204ENST00000502527 ZANQ9Y493 2812 aa12.24□□□□□ -0.45
VCAN-204ENST00000502527 ZFYVE26Q68DK2 2539 aa12.23□□□□□ -0.45
VCAN-204ENST00000502527 RPL39P62891 51 aaKnown RBP12.23□□□□□ -0.45
VCAN-204ENST00000502527 DEFB136Q30KP8 78 aa12.23□□□□□ -0.45
VCAN-204ENST00000502527 Q96MF0 132 aa12.23□□□□□ -0.45
VCAN-204ENST00000502527 PEMTQ9UBM1 199 aa12.23□□□□□ -0.45
VCAN-204ENST00000502527 TRAV2A0A0B4J234 112 aa12.23□□□□□ -0.45
VCAN-204ENST00000502527 K7ERJ3 54 aa12.23□□□□□ -0.45
VCAN-204ENST00000502527 MORN3Q6PF18 240 aaPredicted RBP12.23□□□□□ -0.45
VCAN-204ENST00000502527 C18orf65Q6ZTR6 163 aa12.23□□□□□ -0.45
VCAN-204ENST00000502527 ZNF256Q9Y2P7 627 aaPredicted RBP12.23□□□□□ -0.45
VCAN-204ENST00000502527 CSMD2Q7Z408 3487 aa12.23□□□□□ -0.45
VCAN-204ENST00000502527 KNCNA6PVL3 124 aa12.22□□□□□ -0.45
VCAN-204ENST00000502527 DEFB131AP59861 70 aa12.22□□□□□ -0.45
VCAN-204ENST00000502527 RHOHQ15669 191 aa12.22□□□□□ -0.45
VCAN-204ENST00000502527 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
VCAN-204ENST00000502527 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
VCAN-204ENST00000502527 TRBV7-3A0A075B6L6 115 aa12.22□□□□□ -0.45
VCAN-204ENST00000502527 HERVK_113P61574 105 aa12.22□□□□□ -0.45
VCAN-204ENST00000502527 C4orf3Q8WVX3 66 aa12.22□□□□□ -0.45
VCAN-204ENST00000502527 C11orf86A6NJI1 115 aa12.21□□□□□ -0.45
VCAN-204ENST00000502527 A8MTW9 85 aa12.21□□□□□ -0.45
VCAN-204ENST00000502527 SCGB2A2Q13296 93 aa12.21□□□□□ -0.45
VCAN-204ENST00000502527 NSUN5P1Q3KNT7 163 aa12.21□□□□□ -0.45
VCAN-204ENST00000502527 CR1P17927 2039 aa12.21□□□□□ -0.46
VCAN-204ENST00000502527 ZNF815PA8K554 130 aa12.2□□□□□ -0.46
VCAN-204ENST00000502527 CENPEQ02224 2701 aa12.2□□□□□ -0.46
VCAN-204ENST00000502527 DOPEY2Q9Y3R5 2298 aa12.2□□□□□ -0.46
VCAN-204ENST00000502527 NAV2Q8IVL1 2488 aa12.2□□□□□ -0.46
VCAN-204ENST00000502527 H3BMM0 161 aa12.2□□□□□ -0.46
VCAN-204ENST00000502527 C12orf74Q32Q52 190 aa12.2□□□□□ -0.46
VCAN-204ENST00000502527 PRRC2AP48634 2157 aaKnown RBP12.2□□□□□ -0.46
VCAN-204ENST00000502527 PTPN13Q12923 2485 aa12.19□□□□□ -0.46
VCAN-204ENST00000502527 K7ERU9 68 aa12.19□□□□□ -0.46
VCAN-204ENST00000502527 RBMY1A1P0DJD3 496 aaKnown RBP12.19□□□□□ -0.46
VCAN-204ENST00000502527 RBMY1CP0DJD4 496 aa12.19□□□□□ -0.46
VCAN-204ENST00000502527 RBMY1FQ15415 496 aaKnown RBP12.19□□□□□ -0.46
VCAN-204ENST00000502527 CD300EQ496F6 205 aaPredicted RBP12.19□□□□□ -0.46
VCAN-204ENST00000502527 MXRA5Q9NR99 2828 aa12.19□□□□□ -0.46
VCAN-204ENST00000502527 I3L3M4 83 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms