RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 TPPP3Q9BW30 176 aa13.25□□□□□ -0.29
CTDSP1-213ENST00000496785 SAMD10Q9BYL1 202 aa13.25□□□□□ -0.29
CTDSP1-213ENST00000496785 SMDT1Q9H4I9 107 aa13.25□□□□□ -0.29
CTDSP1-213ENST00000496785 A0A087WWL8 130 aa13.24□□□□□ -0.29
CTDSP1-213ENST00000496785 ZNF727A8MUV8 499 aa13.24□□□□□ -0.29
CTDSP1-213ENST00000496785 SIVA1O15304 175 aa13.24□□□□□ -0.29
CTDSP1-213ENST00000496785 SRP19P09132 144 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-213ENST00000496785 IGLC6P0CF74 106 aa13.24□□□□□ -0.29
CTDSP1-213ENST00000496785 PEA15Q15121 130 aa13.24□□□□□ -0.29
CTDSP1-213ENST00000496785 C1orf134Q5TEV5 83 aa13.24□□□□□ -0.29
CTDSP1-213ENST00000496785 AP1S3Q96PC3 154 aa13.24□□□□□ -0.29
CTDSP1-213ENST00000496785 RPP21Q9H633 154 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-213ENST00000496785 K7EN84 100 aa13.23□□□□□ -0.29
CTDSP1-213ENST00000496785 CRYGDP07320 174 aa13.23□□□□□ -0.29
CTDSP1-213ENST00000496785 SMIM17P0DL12 118 aa13.23□□□□□ -0.29
CTDSP1-213ENST00000496785 FAM74A3Q4VXF1 159 aa13.23□□□□□ -0.29
CTDSP1-213ENST00000496785 FAM231DQ6ZW35 169 aa13.23□□□□□ -0.29
CTDSP1-213ENST00000496785 DNAH6Q9C0G6 4158 aa13.23□□□□□ -0.29
CTDSP1-213ENST00000496785 TRBV10-1A0A0K0K1A3 114 aa13.22□□□□□ -0.29
CTDSP1-213ENST00000496785 BTF3P20290 206 aaKnown RBP13.22□□□□□ -0.29
CTDSP1-213ENST00000496785 RAB14P61106 215 aa13.22□□□□□ -0.29
CTDSP1-213ENST00000496785 ATP6V0E2Q8NHE4 81 aa13.22□□□□□ -0.29
CTDSP1-213ENST00000496785 RNASE7Q9H1E1 156 aaKnown RBP13.22□□□□□ -0.29
CTDSP1-213ENST00000496785 K7EP13 123 aa13.21□□□□□ -0.29
CTDSP1-213ENST00000496785 GZMBP10144 247 aa13.21□□□□□ -0.29
CTDSP1-213ENST00000496785 RAB4BP61018 213 aa13.21□□□□□ -0.29
CTDSP1-213ENST00000496785 ZNF56Q15929 161 aa13.21□□□□□ -0.29
CTDSP1-213ENST00000496785 TRAV9-2A0A087WT02 112 aa13.2□□□□□ -0.3
CTDSP1-213ENST00000496785 GAGE12JA6NER3 117 aa13.2□□□□□ -0.3
CTDSP1-213ENST00000496785 GATCO43716 136 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-213ENST00000496785 GAGE1Q13065 139 aa13.2□□□□□ -0.3
CTDSP1-213ENST00000496785 GAGE4Q13068 117 aa13.2□□□□□ -0.3
CTDSP1-213ENST00000496785 GAGE5Q13069 117 aa13.2□□□□□ -0.3
CTDSP1-213ENST00000496785 GAGE13Q4V321 117 aa13.2□□□□□ -0.3
CTDSP1-213ENST00000496785 WDR73Q6P4I2 378 aa13.2□□□□□ -0.3
CTDSP1-213ENST00000496785 Q6ZSN1 163 aa13.2□□□□□ -0.3
CTDSP1-213ENST00000496785 C6orf223Q8N319 242 aa13.2□□□□□ -0.3
CTDSP1-213ENST00000496785 GTSF1LQ9H1H1 148 aa13.2□□□□□ -0.3
CTDSP1-213ENST00000496785 TRAV8-6A0A0B4J262 113 aa13.19□□□□□ -0.3
CTDSP1-213ENST00000496785 MUC21A0A0G2JKD1 596 aa13.19□□□□□ -0.3
CTDSP1-213ENST00000496785 MUC21A0A140T8X8 626 aa13.19□□□□□ -0.3
CTDSP1-213ENST00000496785 A8MWL6 223 aa13.19□□□□□ -0.3
CTDSP1-213ENST00000496785 TRGC1P0CF51 173 aa13.19□□□□□ -0.3
CTDSP1-213ENST00000496785 ERVFC1-1P60608 527 aa13.19□□□□□ -0.3
CTDSP1-213ENST00000496785 RPL36AP83881 106 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-213ENST00000496785 CT83Q5H943 113 aa13.19□□□□□ -0.3
CTDSP1-213ENST00000496785 LINC01551Q86U37 167 aa13.19□□□□□ -0.3
CTDSP1-213ENST00000496785 C14orf178Q8N769 122 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-213ENST00000496785 RPL36ALQ969Q0 106 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-213ENST00000496785 CTRLP40313 264 aa13.18□□□□□ -0.3
CTDSP1-213ENST00000496785 SSTP61278 116 aa13.18□□□□□ -0.3
CTDSP1-213ENST00000496785 LELP1Q5T871 98 aa13.18□□□□□ -0.3
CTDSP1-213ENST00000496785 LYZL1Q6UWQ5 148 aa13.18□□□□□ -0.3
CTDSP1-213ENST00000496785 A0A087WWC5 75 aa13.17□□□□□ -0.3
CTDSP1-213ENST00000496785 F5H697 171 aa13.17□□□□□ -0.3
CTDSP1-213ENST00000496785 RTL8CO15255 209 aa13.17□□□□□ -0.3
CTDSP1-213ENST00000496785 LINC00694P0DN24 101 aa13.17□□□□□ -0.3
CTDSP1-213ENST00000496785 EVI2AP22794 236 aa13.17□□□□□ -0.3
CTDSP1-213ENST00000496785 TMEM241Q24JQ0 296 aa13.17□□□□□ -0.3
CTDSP1-213ENST00000496785 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.17□□□□□ -0.3
CTDSP1-213ENST00000496785 PRSS29PA6NIE9 313 aa13.16□□□□□ -0.3
CTDSP1-213ENST00000496785 OR10J3Q5JRS4 329 aa13.16□□□□□ -0.3
CTDSP1-213ENST00000496785 C10orf126Q8N4M7 172 aa13.16□□□□□ -0.3
CTDSP1-213ENST00000496785 C15orf54Q8N8G6 183 aa13.16□□□□□ -0.3
CTDSP1-213ENST00000496785 H7C1H1 209 aa13.15□□□□□ -0.3
CTDSP1-213ENST00000496785 DNAH10OSP0CZ25 163 aa13.15□□□□□ -0.3
CTDSP1-213ENST00000496785 WFDC10BQ8IUB3 73 aa13.15□□□□□ -0.3
CTDSP1-213ENST00000496785 BORCS7Q96B45 105 aa13.15□□□□□ -0.3
CTDSP1-213ENST00000496785 CNFNQ9BYD5 112 aa13.15□□□□□ -0.3
CTDSP1-213ENST00000496785 OSTCQ9NRP0 149 aa13.15□□□□□ -0.3
CTDSP1-213ENST00000496785 NAT8Q9UHE5 227 aa13.15□□□□□ -0.3
CTDSP1-213ENST00000496785 TRBV7-3A0A075B6L6 115 aa13.14□□□□□ -0.31
CTDSP1-213ENST00000496785 IGHV3-38A0A0C4DH36 116 aa13.14□□□□□ -0.31
CTDSP1-213ENST00000496785 NTF3P20783 257 aa13.14□□□□□ -0.31
CTDSP1-213ENST00000496785 SMIM15Q7Z3B0 74 aa13.14□□□□□ -0.31
CTDSP1-213ENST00000496785 OR10G8Q8NGN5 311 aa13.14□□□□□ -0.31
CTDSP1-213ENST00000496785 DPH3P1Q9H4G8 78 aa13.14□□□□□ -0.31
CTDSP1-213ENST00000496785 KIF25-AS1Q9Y6Z4 181 aa13.14□□□□□ -0.31
CTDSP1-213ENST00000496785 MGPP08493 103 aa13.13□□□□□ -0.31
CTDSP1-213ENST00000496785 KRTAP1-5Q9BYS1 174 aa13.13□□□□□ -0.31
CTDSP1-213ENST00000496785 GFRA4Q9GZZ7 299 aa13.13□□□□□ -0.31
CTDSP1-213ENST00000496785 FAM231BA6NCW3 169 aa13.12□□□□□ -0.31
CTDSP1-213ENST00000496785 TWIST1Q15672 202 aa13.12□□□□□ -0.31
CTDSP1-213ENST00000496785 MSRB1Q9NZV6 116 aa13.12□□□□□ -0.31
CTDSP1-213ENST00000496785 C9JQL5 133 aa13.11□□□□□ -0.31
CTDSP1-213ENST00000496785 FOXA3P55318 350 aaPredicted RBP13.11□□□□□ -0.31
CTDSP1-213ENST00000496785 UBE2D3P61077 147 aa13.11□□□□□ -0.31
CTDSP1-213ENST00000496785 UBE2D2P62837 147 aa13.11□□□□□ -0.31
CTDSP1-213ENST00000496785 SRSF3P84103 164 aaKnown RBP13.11□□□□□ -0.31
CTDSP1-213ENST00000496785 ADIRFQ15847 76 aa13.11□□□□□ -0.31
CTDSP1-213ENST00000496785 LINC01556Q5JQF7 62 aa13.11□□□□□ -0.31
CTDSP1-213ENST00000496785 NFE4Q86UQ8 179 aa13.11□□□□□ -0.31
CTDSP1-213ENST00000496785 TSKUQ8WUA8 353 aa13.11□□□□□ -0.31
CTDSP1-213ENST00000496785 ISOC2Q96AB3 205 aa13.11□□□□□ -0.31
CTDSP1-213ENST00000496785 RPL23P62829 140 aaKnown RBP13.1□□□□□ -0.31
CTDSP1-213ENST00000496785 CLLU1Q5K131 121 aa13.1□□□□□ -0.31
CTDSP1-213ENST00000496785 NEXN-AS1Q8NBZ9 246 aa13.1□□□□□ -0.31
CTDSP1-213ENST00000496785 GTSF1Q8WW33 167 aa13.1□□□□□ -0.31
CTDSP1-213ENST00000496785 Q9UF83 564 aa13.1□□□□□ -0.31
CTDSP1-213ENST00000496785 LINC00315P59091 139 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms