RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 MUC21Q5SSG8 566 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 ADAMTSL5Q6ZMM2 481 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 FA2HQ7L5A8 372 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 SNAI2O43623 268 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 CACNG7P62955 275 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 ATOH7Q8N100 152 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 UQCR10Q9UDW1 63 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 UTP20O75691 2785 aaKnown RBP6.28□□□□□ -1.4
VPS13B-206ENST00000496144 IGLC3P0DOY3 106 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 C16orf74Q96GX8 76 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 DEFB130BP0DP73 79 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 DEFB130AP0DP74 79 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 C11orf68Q9H3H3 251 aaKnown RBP6.27□□□□□ -1.41
VPS13B-206ENST00000496144 LAMTOR2Q9Y2Q5 125 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 IGHV4-4A0A075B6R2 117 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 PRSS3P2Q8NHM4 247 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 EDN2P20800 178 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 OR10AG1Q8NH19 301 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 A0A096LNJ9 63 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 LOC389332A0A1B0GUA5 103 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 NPYP01303 97 aa6.27□□□□□ -1.41
VPS13B-206ENST00000496144 TRGV11A0A075B6L2 103 aa6.26□□□□□ -1.41
VPS13B-206ENST00000496144 SMKR1H3BMG3 65 aa6.26□□□□□ -1.41
VPS13B-206ENST00000496144 S100A4P26447 101 aaKnown RBP6.26□□□□□ -1.41
VPS13B-206ENST00000496144 AP5S1Q9NUS5 200 aa6.26□□□□□ -1.41
VPS13B-206ENST00000496144 RBMY1BA6NDE4 496 aaKnown RBP6.26□□□□□ -1.41
VPS13B-206ENST00000496144 RBMY1EA6NEQ0 496 aaKnown RBP6.26□□□□□ -1.41
VPS13B-206ENST00000496144 RBMY1DP0C7P1 496 aaKnown RBP6.26□□□□□ -1.41
VPS13B-206ENST00000496144 NANOS2P60321 138 aaKnown RBP6.26□□□□□ -1.41
VPS13B-206ENST00000496144 Q6ZQT7 251 aa6.26□□□□□ -1.41
VPS13B-206ENST00000496144 MSRB1Q9NZV6 116 aa6.26□□□□□ -1.41
VPS13B-206ENST00000496144 IGHV4-28A0A0C4DH34 117 aa6.26□□□□□ -1.41
VPS13B-206ENST00000496144 LYRM9A8MSI8 78 aa6.26□□□□□ -1.41
VPS13B-206ENST00000496144 CKS2P33552 79 aa6.26□□□□□ -1.41
VPS13B-206ENST00000496144 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
VPS13B-206ENST00000496144 SSTP61278 116 aa6.26□□□□□ -1.41
VPS13B-206ENST00000496144 PPBPP02775 128 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 ZFAND2AQ8N6M9 145 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 SYT8Q8NBV8 401 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 OVOL2Q9BRP0 275 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 WFDC10AQ9H1F0 79 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 PRSS47A8MTI9 375 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 TRGV4A0A0C4DH28 118 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 TRBV7-9A0A0J9YWB2 115 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 NCR2O95944 276 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 MED14OSP0DP75 135 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 LINC00336Q6ZUF6 198 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 MAP1LC3AQ9H492 121 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 SCRT2Q9NQ03 307 aa6.25□□□□□ -1.41
VPS13B-206ENST00000496144 ZNF415Q09FC8 603 aa6.24□□□□□ -1.41
VPS13B-206ENST00000496144 FAM159AQ6UWV7 190 aa6.24□□□□□ -1.41
VPS13B-206ENST00000496144 DCANP1Q8TF63 244 aa6.24□□□□□ -1.41
VPS13B-206ENST00000496144 TRAV21A0A0B4J279 112 aa6.24□□□□□ -1.41
VPS13B-206ENST00000496144 DEFB4AO15263 64 aa6.24□□□□□ -1.41
VPS13B-206ENST00000496144 Q6ZN92 141 aa6.24□□□□□ -1.41
VPS13B-206ENST00000496144 ST20Q9HBF5 79 aa6.24□□□□□ -1.41
VPS13B-206ENST00000496144 HNRNPA3P51991 378 aaKnown RBP6.24□□□□□ -1.41
VPS13B-206ENST00000496144 TIMM8BQ9Y5J9 83 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-206ENST00000496144 TNFRSF6BO95407 300 aa6.24□□□□□ -1.41
VPS13B-206ENST00000496144 ATRQ13535 2644 aa6.24□□□□□ -1.41
VPS13B-206ENST00000496144 HBDP02042 147 aa6.24□□□□□ -1.41
VPS13B-206ENST00000496144 RNASE4P34096 147 aaKnown RBP6.24□□□□□ -1.41
VPS13B-206ENST00000496144 OR8A1Q8NGG7 326 aa6.24□□□□□ -1.41
VPS13B-206ENST00000496144 MRPS16Q9Y3D3 137 aaKnown RBP6.24□□□□□ -1.41
VPS13B-206ENST00000496144 COL12A1Q99715 3063 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 GAS8-AS1O95177 125 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 HLA-DRB4P13762 266 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 HLA-DRB4X5D2U9 266 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 LINC00469Q8N7U9 141 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 IGLV2-18A0A075B6J9 118 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 TRAV8-6A0A0B4J262 113 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 Q8N1Y9 231 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 hDV102S1A0JD36 115 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 K7EQG2 157 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 SMIM15Q7Z3B0 74 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 Q8N8P6 123 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 RMI2Q96E14 147 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 PRADC1Q9BSG0 188 aa6.23□□□□□ -1.41
VPS13B-206ENST00000496144 NRACQ8N912 160 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 ODF3Q96PU9 254 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 F6UB75 175 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 H3BVH4 76 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 EVI2AP22794 236 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 ASIPP42127 132 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 DEFB1P60022 68 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 MRAP2Q96G30 205 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 H0Y8G0 127 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 SMIM17P0DL12 118 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 LGALS9BQ3B8N2 356 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 LGALS9CQ6DKI2 356 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 SH2D6Q7Z4S9 175 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 NXT2Q9NPJ8 142 aaKnown RBP6.22□□□□□ -1.41
VPS13B-206ENST00000496144 HSBP1L1C9JCN9 74 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 ANXA2RQ3ZCQ2 193 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 C1orf134Q5TEV5 83 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 POM121L12Q8N7R1 296 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 KLLNB2CW77 178 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 CDKN1BP46527 198 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 NFE4Q86UQ8 179 aa6.22□□□□□ -1.41
VPS13B-206ENST00000496144 COL6A5A8TX70 2615 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms