RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 INSL4Q14641 139 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 CDK5R1Q15078 307 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 ADIRFQ15847 76 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 SPATA45Q537H7 98 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 ATP11AUNQ6ZP68 121 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 ZNF833PQ6ZTB9 187 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 RAB37Q96AX2 223 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 LINC01600Q96MT4 127 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 KDM5CP41229 1560 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 FER1L6Q2WGJ9 1857 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 PLIN4Q96Q06 1357 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 PRDM15P57071 1507 aaPredicted RBP0.94□□□□□ -2.26
LMNB1-207ENST00000494185 MAGI3Q5TCQ9 1506 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 COL4A5P29400 1685 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 QRICH2Q9H0J4 1663 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 NUP98P52948 1817 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 PHIPQ8WWQ0 1821 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 FN1P02751 2386 aaKnown RBP0.93□□□□□ -2.26
LMNB1-207ENST00000494185 RTTNQ86VV8 2226 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 MYO18AQ92614 2054 aaKnown RBP0.93□□□□□ -2.26
LMNB1-207ENST00000494185 ATP10BO94823 1461 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 NCOA2Q15596 1464 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 CHD1O14646 1710 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 A0A087WWC5 75 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.93□□□□□ -2.26
LMNB1-207ENST00000494185 C10orf142B7Z368 130 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 SSSCA1O60232 199 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 ERC2-IT1O76042 136 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 SAA1P0DJI8 122 aaPredicted RBP0.93□□□□□ -2.26
LMNB1-207ENST00000494185 KRTAP12-1P59990 96 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 NPC2P61916 151 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 LSM3P62310 102 aaKnown RBP0.93□□□□□ -2.26
LMNB1-207ENST00000494185 CCL8P80075 99 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 UNQ6190/PRO20217Q6UXQ8 127 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.93□□□□□ -2.26
LMNB1-207ENST00000494185 C5orf38Q86SI9 138 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 OR5AS1Q8N127 324 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 DEFB119Q8N690 84 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 C15orf53Q8NAA6 179 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 FAM213BQ8TBF2 198 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 MYOZ3Q8TDC0 251 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 TSKUQ8WUA8 353 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 PPDPFLQ8WWR9 84 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 ZNF625Q96I27 306 aaPredicted RBP0.93□□□□□ -2.26
LMNB1-207ENST00000494185 RABAC1Q9UI14 185 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 EML6Q6ZMW3 1958 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 MAPKBP1O60336 1514 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 BRWD1Q9NSI6 2320 aa0.93□□□□□ -2.26
LMNB1-207ENST00000494185 RBBP6Q7Z6E9 1792 aaKnown RBP0.93□□□□□ -2.26
LMNB1-207ENST00000494185 CFTRP13569 1480 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 MAGI2Q86UL8 1455 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 PLEKHH2Q8IVE3 1493 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 ADGRB1O14514 1584 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 C10orf71Q711Q0 1435 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 HELZP42694 1942 aaKnown RBP0.92□□□□□ -2.26
LMNB1-207ENST00000494185 MYH13Q9UKX3 1938 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 TRAV17A0A0B4J275 112 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 NAP1L6A6NFF2 107 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 ZNF736B4DX44 427 aaPredicted RBP0.92□□□□□ -2.26
LMNB1-207ENST00000494185 M0R2N4 97 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 CCL16O15467 120 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 SFTA3P0C7M3 94 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 CXCL8P10145 99 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 EFNA4P52798 201 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 RBM3P98179 157 aaKnown RBP0.92□□□□□ -2.26
LMNB1-207ENST00000494185 CIRBPQ14011 172 aaKnown RBP0.92□□□□□ -2.26
LMNB1-207ENST00000494185 ASB16-AS1Q495Z4 193 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 ZCCHC23Q6ZST2 131 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 CLECL1Q8IZS7 167 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 FAM19A2Q8N3H0 131 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 ZNF563Q8TA94 476 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 PATE1Q8WXA2 126 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 PMCHL2Q9BQD1 86 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 BPESC1Q9GZL8 116 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 TMEM242Q9NWH2 141 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 V9GYH0 126 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 FANCMQ8IYD8 2048 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 MED12LQ86YW9 2145 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 TANC2Q9HCD6 1990 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 SCN8AQ9UQD0 1980 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 COL5A3P25940 1745 aaPredicted RBP0.92□□□□□ -2.26
LMNB1-207ENST00000494185 COL1A1P02452 1464 aaPredicted RBP0.92□□□□□ -2.26
LMNB1-207ENST00000494185 FYCO1Q9BQS8 1478 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 NRXN1Q9ULB1 1477 aa0.92□□□□□ -2.26
LMNB1-207ENST00000494185 PTPRFP10586 1907 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 ANKARQ7Z5J8 1434 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 DLC1Q96QB1 1528 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 MADDQ8WXG6 1647 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 LOC110117498A0A087WWA1 95 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 TRBV6-8A0A0A6YYG3 113 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 TRAV2A0A0B4J234 112 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 UBE2L5PA0A1B0GUS4 154 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 H7BZZ5 65 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 PIRTP0C851 137 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 PCBD1P61457 104 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 UBE2L3P68036 154 aaKnown RBP0.91□□□□□ -2.26
LMNB1-207ENST00000494185 MPV17LQ2QL34 196 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 CFAP126Q5VTH2 177 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 LINC00269Q8N2A0 174 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 SERP2Q8N6R1 65 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms