RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 PARLQ9H300 379 aa7.19□□□□□ -1.26
SNRNP200-207ENST00000493271 GAGE12JA6NER3 117 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 TEX46H3BTG2 121 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 RHODO00212 210 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 GCGP01275 180 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 RNASE3P12724 160 aaKnown RBP7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 RPL37AP61513 92 aaKnown RBP7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 Q0VG73 95 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 GAGE1Q13065 139 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 GAGE4Q13068 117 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 GAGE5Q13069 117 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 LINC01620Q4KN68 170 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 GAGE13Q4V321 117 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 SMUG1Q53HV7 270 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 ATRAIDQ6UW56 229 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 NIT1Q86X76 327 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 Q8N3U1 123 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 C5orf17Q8NAS9 161 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 LINC00479Q96M42 142 aa7.18□□□□□ -1.26
SNRNP200-207ENST00000493271 A0A087WX48 190 aa7.17□□□□□ -1.26
SNRNP200-207ENST00000493271 UMAD1C9J7I0 102 aa7.17□□□□□ -1.26
SNRNP200-207ENST00000493271 SAPCD1Q5SSQ6 148 aa7.17□□□□□ -1.26
SNRNP200-207ENST00000493271 C11orf21Q9P2W6 132 aa7.17□□□□□ -1.26
SNRNP200-207ENST00000493271 TCRAP04437 139 aa7.16□□□□□ -1.26
SNRNP200-207ENST00000493271 S100A4P26447 101 aaKnown RBP7.16□□□□□ -1.26
SNRNP200-207ENST00000493271 ZNF80P51504 273 aaPredicted RBP7.16□□□□□ -1.26
SNRNP200-207ENST00000493271 HSD17B11Q8NBQ5 300 aa7.16□□□□□ -1.26
SNRNP200-207ENST00000493271 WFDC1Q9HC57 220 aa7.16□□□□□ -1.26
SNRNP200-207ENST00000493271 KLK12Q9UKR0 248 aa7.16□□□□□ -1.26
SNRNP200-207ENST00000493271 PSG8Q9UQ74 426 aa7.16□□□□□ -1.26
SNRNP200-207ENST00000493271 PKHD1L1Q86WI1 4243 aa7.16□□□□□ -1.26
SNRNP200-207ENST00000493271 GNG5P63218 68 aa7.15□□□□□ -1.26
SNRNP200-207ENST00000493271 FLI1Q01543 452 aaPredicted RBP7.15□□□□□ -1.26
SNRNP200-207ENST00000493271 TMEM75Q8N9X5 138 aa7.15□□□□□ -1.26
SNRNP200-207ENST00000493271 UBE2WQ96B02 151 aa7.15□□□□□ -1.26
SNRNP200-207ENST00000493271 C1orf43Q9BWL3 253 aa7.15□□□□□ -1.26
SNRNP200-207ENST00000493271 IL36BQ9NZH7 164 aa7.15□□□□□ -1.26
SNRNP200-207ENST00000493271 TRBV10-1A0A0K0K1A3 114 aa7.14□□□□□ -1.27
SNRNP200-207ENST00000493271 ATP6V0CP27449 155 aa7.14□□□□□ -1.27
SNRNP200-207ENST00000493271 ASIPP42127 132 aa7.14□□□□□ -1.27
SNRNP200-207ENST00000493271 AKR1C8PQ5T2L2 129 aa7.14□□□□□ -1.27
SNRNP200-207ENST00000493271 DMRTA1Q5VZB9 504 aa7.14□□□□□ -1.27
SNRNP200-207ENST00000493271 DGAT2L7PQ6IED9 249 aa7.14□□□□□ -1.27
SNRNP200-207ENST00000493271 UFSP1Q6NVU6 142 aa7.14□□□□□ -1.27
SNRNP200-207ENST00000493271 OR10G7Q8NGN6 311 aa7.14□□□□□ -1.27
SNRNP200-207ENST00000493271 OR2G3Q8NGZ4 309 aa7.14□□□□□ -1.27
SNRNP200-207ENST00000493271 PSMG3Q9BT73 122 aaPredicted RBP7.14□□□□□ -1.27
SNRNP200-207ENST00000493271 CRPP02741 224 aa7.13□□□□□ -1.27
SNRNP200-207ENST00000493271 STAG3L2P0CL84 134 aa7.13□□□□□ -1.27
SNRNP200-207ENST00000493271 STAG3L3P0CL85 134 aa7.13□□□□□ -1.27
SNRNP200-207ENST00000493271 ARL14EPLP0DKL9 152 aa7.13□□□□□ -1.27
SNRNP200-207ENST00000493271 RAB2AP61019 212 aa7.13□□□□□ -1.27
SNRNP200-207ENST00000493271 PKIAP61925 76 aa7.13□□□□□ -1.27
SNRNP200-207ENST00000493271 Q6ZRU5 148 aa7.13□□□□□ -1.27
SNRNP200-207ENST00000493271 SUN5Q8TC36 379 aa7.13□□□□□ -1.27
SNRNP200-207ENST00000493271 SGK494Q96LW2 274 aa7.13□□□□□ -1.27
SNRNP200-207ENST00000493271 SAMD10Q9BYL1 202 aa7.13□□□□□ -1.27
SNRNP200-207ENST00000493271 IGKV3D-20A0A0C4DH25 116 aa7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 FABP5P3A8MUU1 101 aa7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 CDC34P49427 236 aaPredicted RBP7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 RPL36AP83881 106 aaKnown RBP7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 DNLZQ5SXM8 178 aa7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 PRNTQ86SH4 94 aa7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 C14orf178Q8N769 122 aaPredicted RBP7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 LYPD6BQ8NI32 183 aa7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 FAM213BQ8TBF2 198 aa7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 RPL36ALQ969Q0 106 aaKnown RBP7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 TMEM167BQ9NRX6 74 aa7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 EPDR1Q9UM22 224 aa7.12□□□□□ -1.27
SNRNP200-207ENST00000493271 EIF3GO75821 320 aaKnown RBP eCLIP7.11□□□□□ -1.27
SNRNP200-207ENST00000493271 SUMO1P63165 101 aaKnown RBP7.11□□□□□ -1.27
SNRNP200-207ENST00000493271 SERF2P84101 59 aa7.11□□□□□ -1.27
SNRNP200-207ENST00000493271 C9orf163Q8N9P6 203 aa7.11□□□□□ -1.27
SNRNP200-207ENST00000493271 DAZAP1Q96EP5 407 aaKnown RBP7.11□□□□□ -1.27
SNRNP200-207ENST00000493271 TRBV7-3A0A075B6L6 115 aa7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 TMEM218A2RU14 115 aa7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 HMGB3O15347 200 aaKnown RBP7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 MBP02144 154 aa7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 GCHFRP30047 84 aa7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 RPL19P84098 196 aaKnown RBP7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 MIAQ16674 131 aa7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 FAM74A4Q5TZK3 123 aa7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 ZC2HC1AQ96GY0 325 aa7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 SFRP2Q96HF1 295 aa7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 DNAJC30Q96LL9 226 aa7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 SMDT1Q9H4I9 107 aa7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 Q9UF83 564 aa7.1□□□□□ -1.27
SNRNP200-207ENST00000493271 A0A1W2PRE2 83 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 B4DEV8 164 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 USP17L23D6RBM5 183 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 TMEM262E9PQX1 116 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 H3BVH4 76 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 CXorf1O96002 111 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 APOC3P02656 99 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 H2AFB1P0C5Y9 115 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 MT1HL1P0DM35 61 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 HNRNPA3P51991 378 aaKnown RBP7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 UBE2D3P61077 147 aa7.09□□□□□ -1.27
SNRNP200-207ENST00000493271 UBE2D2P62837 147 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms