RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 NDUFA1O15239 70 aa12.57□□□□□ -0.4
BRAT1-206ENST00000493232 INSL3P51460 131 aa12.57□□□□□ -0.4
BRAT1-206ENST00000493232 CXCL5P42830 114 aa12.57□□□□□ -0.4
BRAT1-206ENST00000493232 HHLA3Q9XRX5 114 aa12.57□□□□□ -0.4
BRAT1-206ENST00000493232 CRYBA4P53673 196 aa12.57□□□□□ -0.4
BRAT1-206ENST00000493232 MSRB1Q9NZV6 116 aa12.57□□□□□ -0.4
BRAT1-206ENST00000493232 DOCK9Q9BZ29 2069 aa12.56□□□□□ -0.4
BRAT1-206ENST00000493232 TRBV6-1A0A0K0K1D8 114 aa12.56□□□□□ -0.4
BRAT1-206ENST00000493232 F8W735 103 aaPredicted RBP12.56□□□□□ -0.4
BRAT1-206ENST00000493232 NPSP0C0P6 89 aa12.56□□□□□ -0.4
BRAT1-206ENST00000493232 NRGNQ92686 78 aa12.56□□□□□ -0.4
BRAT1-206ENST00000493232 OPRPNQ99935 248 aaPredicted RBP12.56□□□□□ -0.4
BRAT1-206ENST00000493232 SPANXCQ9NY87 97 aa12.55□□□□□ -0.4
BRAT1-206ENST00000493232 PRAC2D3DTV9 90 aa12.55□□□□□ -0.4
BRAT1-206ENST00000493232 TIMM17AQ99595 171 aa12.55□□□□□ -0.4
BRAT1-206ENST00000493232 NOTCH4Q99466 2003 aa12.54□□□□□ -0.4
BRAT1-206ENST00000493232 CTRLP40313 264 aa12.54□□□□□ -0.4
BRAT1-206ENST00000493232 ODF3L1Q8IXM7 274 aa12.54□□□□□ -0.4
BRAT1-206ENST00000493232 EML6Q6ZMW3 1958 aa12.54□□□□□ -0.4
BRAT1-206ENST00000493232 ZGRF1Q86YA3 2104 aa12.54□□□□□ -0.4
BRAT1-206ENST00000493232 A6NDX4 124 aa12.54□□□□□ -0.4
BRAT1-206ENST00000493232 SMAD5-AS1Q9Y6J3 95 aa12.54□□□□□ -0.4
BRAT1-206ENST00000493232 KIR2DL5BA0A0G2JN68 375 aa12.53□□□□□ -0.4
BRAT1-206ENST00000493232 KIR2DL5BA0A0G2JPC4 375 aa12.53□□□□□ -0.4
BRAT1-206ENST00000493232 KIR2DL5AQ8N109 375 aa12.53□□□□□ -0.4
BRAT1-206ENST00000493232 DEFB125Q8N687 156 aa12.53□□□□□ -0.4
BRAT1-206ENST00000493232 KLK5Q9Y337 293 aaPredicted RBP12.53□□□□□ -0.4
BRAT1-206ENST00000493232 A0A1W2PNU3 283 aaPredicted RBP12.53□□□□□ -0.4
BRAT1-206ENST00000493232 MUSTN1Q8IVN3 82 aa12.53□□□□□ -0.4
BRAT1-206ENST00000493232 TOMM6Q96B49 74 aa12.52□□□□□ -0.4
BRAT1-206ENST00000493232 IGHV4-4A0A075B6R2 117 aa12.52□□□□□ -0.41
BRAT1-206ENST00000493232 LOXL1Q08397 574 aaPredicted RBP12.52□□□□□ -0.41
BRAT1-206ENST00000493232 NDUFB1O75438 58 aa12.52□□□□□ -0.41
BRAT1-206ENST00000493232 IGLL5B9A064 214 aa12.52□□□□□ -0.41
BRAT1-206ENST00000493232 GTSF1Q8WW33 167 aa12.52□□□□□ -0.41
BRAT1-206ENST00000493232 DEFB135Q30KP9 77 aa12.51□□□□□ -0.41
BRAT1-206ENST00000493232 TMEM263Q8WUH6 116 aaKnown RBP12.51□□□□□ -0.41
BRAT1-206ENST00000493232 A4D1N5 150 aa12.51□□□□□ -0.41
BRAT1-206ENST00000493232 PCNX2A6NKB5 2137 aa12.51□□□□□ -0.41
BRAT1-206ENST00000493232 MUC6Q6W4X9 2439 aa12.51□□□□□ -0.41
BRAT1-206ENST00000493232 MED13Q9UHV7 2174 aa12.51□□□□□ -0.41
BRAT1-206ENST00000493232 TNFRSF13BO14836 293 aaPredicted RBP12.51□□□□□ -0.41
BRAT1-206ENST00000493232 A0A0J9YX75 114 aa12.5□□□□□ -0.41
BRAT1-206ENST00000493232 LRRC75A-AS1Q8N1F1 130 aa12.5□□□□□ -0.41
BRAT1-206ENST00000493232 CITED2Q99967 270 aaPredicted RBP12.5□□□□□ -0.41
BRAT1-206ENST00000493232 ESM1Q9NQ30 184 aa12.5□□□□□ -0.41
BRAT1-206ENST00000493232 CCL25O15444 150 aa12.5□□□□□ -0.41
BRAT1-206ENST00000493232 VSIG2Q96IQ7 327 aa12.5□□□□□ -0.41
BRAT1-206ENST00000493232 ANKRD39Q53RE8 183 aa12.49□□□□□ -0.41
BRAT1-206ENST00000493232 BAALCQ8WXS3 180 aa12.49□□□□□ -0.41
BRAT1-206ENST00000493232 HIGD1BQ9P298 99 aa12.49□□□□□ -0.41
BRAT1-206ENST00000493232 TRBV10-1A0A0K0K1A3 114 aa12.49□□□□□ -0.41
BRAT1-206ENST00000493232 RPL39P62891 51 aaKnown RBP12.49□□□□□ -0.41
BRAT1-206ENST00000493232 KMT2EQ8IZD2 1858 aa12.49□□□□□ -0.41
BRAT1-206ENST00000493232 IGLV2-14P01704 120 aa12.49□□□□□ -0.41
BRAT1-206ENST00000493232 UBE2AP49459 152 aa12.49□□□□□ -0.41
BRAT1-206ENST00000493232 TMEM258P61165 79 aa12.49□□□□□ -0.41
BRAT1-206ENST00000493232 SPAG11BQ08648 103 aa12.49□□□□□ -0.41
BRAT1-206ENST00000493232 TMEM61Q8N0U2 210 aa12.49□□□□□ -0.41
BRAT1-206ENST00000493232 Q8NA96 180 aa12.49□□□□□ -0.41
BRAT1-206ENST00000493232 C11orf86A6NJI1 115 aa12.48□□□□□ -0.41
BRAT1-206ENST00000493232 PRO0255Q9UI72 69 aa12.48□□□□□ -0.41
BRAT1-206ENST00000493232 ZFHX2Q9C0A1 2572 aaPredicted RBP12.48□□□□□ -0.41
BRAT1-206ENST00000493232 MED13LQ71F56 2210 aa12.48□□□□□ -0.41
BRAT1-206ENST00000493232 IL17DQ8TAD2 202 aa12.48□□□□□ -0.41
BRAT1-206ENST00000493232 FANCD2OSQ96PS1 177 aa12.48□□□□□ -0.41
BRAT1-206ENST00000493232 NCKAP5O14513 1909 aa12.48□□□□□ -0.41
BRAT1-206ENST00000493232 E9PLD3 99 aa12.47□□□□□ -0.41
BRAT1-206ENST00000493232 LINC00173Q6ZV60 143 aa12.47□□□□□ -0.41
BRAT1-206ENST00000493232 SHANK1Q9Y566 2161 aa12.47□□□□□ -0.41
BRAT1-206ENST00000493232 DNAJC9-AS1A6NH13 148 aa12.47□□□□□ -0.41
BRAT1-206ENST00000493232 MSMPQ1L6U9 139 aa12.47□□□□□ -0.41
BRAT1-206ENST00000493232 E7EUB6 86 aa12.46□□□□□ -0.41
BRAT1-206ENST00000493232 FAM208BQ5VWN6 2430 aa12.46□□□□□ -0.41
BRAT1-206ENST00000493232 UNQ9165/PRO28630Q6UXU0 137 aa12.46□□□□□ -0.42
BRAT1-206ENST00000493232 ODF3BA8MYP8 253 aa12.45□□□□□ -0.42
BRAT1-206ENST00000493232 MAP6D1Q9H9H5 199 aa12.45□□□□□ -0.42
BRAT1-206ENST00000493232 PLA2G2EQ9NZK7 142 aa12.45□□□□□ -0.42
BRAT1-206ENST00000493232 JMJD7-PLA2G4BH0Y9G9 81 aa12.45□□□□□ -0.42
BRAT1-206ENST00000493232 RBM3P98179 157 aaKnown RBP12.45□□□□□ -0.42
BRAT1-206ENST00000493232 LINC01620Q4KN68 170 aa12.45□□□□□ -0.42
BRAT1-206ENST00000493232 KLK12Q9UKR0 248 aa12.45□□□□□ -0.42
BRAT1-206ENST00000493232 A0A0B4J2C4 111 aa12.45□□□□□ -0.42
BRAT1-206ENST00000493232 NREPQ16612 68 aa12.45□□□□□ -0.42
BRAT1-206ENST00000493232 LINC00574Q9H8X3 128 aa12.45□□□□□ -0.42
BRAT1-206ENST00000493232 C20orf203Q8NBC4 194 aa12.44□□□□□ -0.42
BRAT1-206ENST00000493232 DIRC1Q969H9 104 aa12.44□□□□□ -0.42
BRAT1-206ENST00000493232 RS1O15537 224 aa12.44□□□□□ -0.42
BRAT1-206ENST00000493232 NDUFA11Q86Y39 141 aa12.44□□□□□ -0.42
BRAT1-206ENST00000493232 NCR3O14931 201 aa12.44□□□□□ -0.42
BRAT1-206ENST00000493232 LMO4P61968 165 aa12.44□□□□□ -0.42
BRAT1-206ENST00000493232 ODF3Q96PU9 254 aa12.44□□□□□ -0.42
BRAT1-206ENST00000493232 TRBV12-3P01733 135 aa12.43□□□□□ -0.42
BRAT1-206ENST00000493232 MP68P56378 58 aa12.43□□□□□ -0.42
BRAT1-206ENST00000493232 IGHV1-58A0A0C4DH39 117 aa12.43□□□□□ -0.42
BRAT1-206ENST00000493232 C19orf71A6NCJ1 209 aa12.43□□□□□ -0.42
BRAT1-206ENST00000493232 NUPR1O60356 82 aa12.43□□□□□ -0.42
BRAT1-206ENST00000493232 MDFICQ9P1T7 246 aa12.43□□□□□ -0.42
BRAT1-206ENST00000493232 PRORYQ9H606 182 aa12.43□□□□□ -0.42
BRAT1-206ENST00000493232 DEFB4AO15263 64 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms