RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 CT83Q5H943 113 aa8.81□□□□□ -1
SEC61A1-206ENST00000491668 A0A0J9YY99 117 aa8.8□□□□□ -1
SEC61A1-206ENST00000491668 M0R381 172 aa8.8□□□□□ -1
SEC61A1-206ENST00000491668 PPP1R2P9O14990 202 aa8.8□□□□□ -1
SEC61A1-206ENST00000491668 ZFP82Q8N141 532 aa8.8□□□□□ -1
SEC61A1-206ENST00000491668 BORCS7Q96B45 105 aa8.8□□□□□ -1
SEC61A1-206ENST00000491668 MUC21A0A0G2JKD1 596 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 MUC21A0A140T8X8 626 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 F2Z2F3 143 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 APOC3P02656 99 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 OR5AL1P0C617 328 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 LYZL1Q6UWQ5 148 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 TSKUQ8WUA8 353 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 RASL10AQ92737 203 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 VSIG2Q96IQ7 327 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 C18orf15Q96N68 181 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 V9GYV3 84 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 MUC4Q99102 2169 aa8.79□□□□□ -1
SEC61A1-206ENST00000491668 SNAI2O43623 268 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 IGHV3-53P01767 116 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 IGLC6P0CF74 106 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 ESRGQ1W209 222 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 C1orf134Q5TEV5 83 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 OR4C5Q8NGB2 326 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 OR10AG1Q8NH19 301 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 PTH2Q96A98 100 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 ANAPC16Q96DE5 110 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 PGLYRP4Q96LB8 373 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 KRTAP1-5Q9BYS1 174 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 GFRA4Q9GZZ7 299 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 SCRT2Q9NQ03 307 aa8.78□□□□□ -1
SEC61A1-206ENST00000491668 CARHSP1Q9Y2V2 147 aaKnown RBP8.78□□□□□ -1
SEC61A1-206ENST00000491668 HIGD1CA8MV81 97 aa8.77□□□□□ -1.01
SEC61A1-206ENST00000491668 A8MWV9 139 aa8.77□□□□□ -1.01
SEC61A1-206ENST00000491668 CCL18P55774 89 aa8.77□□□□□ -1.01
SEC61A1-206ENST00000491668 CACNG7P62955 275 aa8.77□□□□□ -1.01
SEC61A1-206ENST00000491668 ZNF575Q86XF7 245 aa8.77□□□□□ -1.01
SEC61A1-206ENST00000491668 SSBP4Q9BWG4 385 aaPredicted RBP8.77□□□□□ -1.01
SEC61A1-206ENST00000491668 TRAV4A0A0B4J268 109 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 TRGV4A0A0C4DH28 118 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 FAM231BA6NCW3 169 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 H3BNG1 76 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 SMIM17P0DL12 118 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 TNP2Q05952 138 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 TWIST1Q15672 202 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 PIK3CD-AS1Q5SR53 167 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 C10orf91Q5T1B1 145 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 SMIM15Q7Z3B0 74 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 SVBPQ8N300 66 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 GTSF1Q8WW33 167 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 NAT8BQ9UHF3 227 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 RYR1P21817 5038 aa8.76□□□□□ -1.01
SEC61A1-206ENST00000491668 A0A096LPF7 62 aa8.75□□□□□ -1.01
SEC61A1-206ENST00000491668 SNAPINO95295 136 aa8.75□□□□□ -1.01
SEC61A1-206ENST00000491668 NTF3P20783 257 aa8.75□□□□□ -1.01
SEC61A1-206ENST00000491668 CTRLP40313 264 aa8.75□□□□□ -1.01
SEC61A1-206ENST00000491668 FAM74A4Q5TZK3 123 aa8.75□□□□□ -1.01
SEC61A1-206ENST00000491668 CLRN3Q8NCR9 226 aa8.75□□□□□ -1.01
SEC61A1-206ENST00000491668 AP1S3Q96PC3 154 aa8.75□□□□□ -1.01
SEC61A1-206ENST00000491668 RPS10P5Q9NQ39 176 aa8.75□□□□□ -1.01
SEC61A1-206ENST00000491668 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 A0A1B0GUT8 65 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 SMIM27A0A1W2PRY6 76 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 CIDEAO60543 219 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 TRGC1P0CF51 173 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 RHEBQ15382 184 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 CFAP126Q5VTH2 177 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 WDR73Q6P4I2 378 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 ZNF479Q96JC4 524 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 UPK3BQ9BT76 320 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 CTDSP1Q9GZU7 261 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 Q9H8V8 135 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 JPT2Q9H910 190 aa8.74□□□□□ -1.01
SEC61A1-206ENST00000491668 LRP1BQ9NZR2 4599 aa8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 A0A087WWL8 130 aa8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 C7orf77A4D0Y5 90 aa8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 RHODO00212 210 aa8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 RS1O15537 224 aa8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 NXPH4O95158 308 aa8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 FOXA3P55318 350 aaPredicted RBP8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 SLAQ13239 276 aa8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 RIGQ13278 110 aa8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 C6orf223Q8N319 242 aa8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 C14orf178Q8N769 122 aaPredicted RBP8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 NUP35Q8NFH5 326 aa8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 MRPS16Q9Y3D3 137 aaKnown RBP8.73□□□□□ -1.01
SEC61A1-206ENST00000491668 S100PP25815 95 aa8.72□□□□□ -1.01
SEC61A1-206ENST00000491668 FHL2Q14192 279 aa8.72□□□□□ -1.01
SEC61A1-206ENST00000491668 KCNIP4Q6PIL6 250 aa8.72□□□□□ -1.01
SEC61A1-206ENST00000491668 MSRB1Q9NZV6 116 aa8.72□□□□□ -1.01
SEC61A1-206ENST00000491668 HHLA3Q9XRX5 114 aa8.72□□□□□ -1.01
SEC61A1-206ENST00000491668 HSPG2P98160 4391 aa8.72□□□□□ -1.01
SEC61A1-206ENST00000491668 F5H697 171 aa8.71□□□□□ -1.02
SEC61A1-206ENST00000491668 MGPP08493 103 aa8.71□□□□□ -1.02
SEC61A1-206ENST00000491668 ZNF56Q15929 161 aa8.71□□□□□ -1.02
SEC61A1-206ENST00000491668 ZFP2Q6ZN57 461 aa8.71□□□□□ -1.02
SEC61A1-206ENST00000491668 CNFNQ9BYD5 112 aa8.71□□□□□ -1.02
SEC61A1-206ENST00000491668 SAMD10Q9BYL1 202 aa8.71□□□□□ -1.02
SEC61A1-206ENST00000491668 PRO0255Q9UI72 69 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms