RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 IGHV3-74A0A0B4J1X5 117 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 IGHV1-58A0A0C4DH39 117 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 SRRM5B3KS81 715 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 TCRAP04437 139 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 ZNF883P0CG24 379 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 PYYP10082 97 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 PI4KAP42356 2102 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 ZNF137PP52743 207 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 EGFEM1PQ0D2K5 195 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 CASC10Q5T4H9 136 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 REG3GQ6UW15 175 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 PATE2Q6UY27 113 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 LCA10Q71F78 164 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 LYPD1Q8N2G4 141 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 TEX29Q8N6K0 151 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 CD177Q8N6Q3 437 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 OR8A1Q8NGG7 326 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 COPS9Q8WXC6 57 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 NDUFA4L2Q9NRX3 87 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 TMEM14CQ9P0S9 112 aa3.42□□□□□ -1.86
RTN4-215ENST00000491592 PCNX2A6NKB5 2137 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 DOCK10Q96BY6 2186 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 DSCAML1Q8TD84 2053 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 IGLV7-46A0A075B6I9 117 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 TRAV41A0A0B4J266 112 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 PINLYPA6NC86 204 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 LINC01546A6NGU7 62 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 A8MWV9 139 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 ZNF73O43830 326 aaPredicted RBP3.41□□□□□ -1.86
RTN4-215ENST00000491592 SAA2P0DJI9 122 aaPredicted RBP3.41□□□□□ -1.86
RTN4-215ENST00000491592 FAM104BQ5XKR9 115 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 MORN3Q6PF18 240 aaPredicted RBP3.41□□□□□ -1.86
RTN4-215ENST00000491592 AMTNQ6UX39 209 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 LINC00322Q6ZN03 302 aaPredicted RBP3.41□□□□□ -1.86
RTN4-215ENST00000491592 ZNF826PQ6ZT77 177 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 SCXQ7RTU7 201 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 Q86TA4 180 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 CEND1Q8N111 149 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 ORMDL3Q8N138 153 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 TTC9CQ8N5M4 171 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 TMEM167AQ8TBQ9 72 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 FAM104AQ969W3 186 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 RAB37Q96AX2 223 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 CHCHD5Q9BSY4 110 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 HILPDAQ9Y5L2 63 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 U3KQA8 63 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 TNCP24821 2201 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 KIAA0100Q14667 2235 aaKnown RBP3.41□□□□□ -1.86
RTN4-215ENST00000491592 DNAH12Q6ZR08 3092 aa3.41□□□□□ -1.86
RTN4-215ENST00000491592 IGKV1D-17A0A075B6S4 117 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 IGKV1D-37A0A075B6S9 117 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 H3BMG7 143 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 K7EM74 188 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 NDUFB3O43676 98 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 CD7P09564 240 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 SAA1P0DJI8 122 aaPredicted RBP3.4□□□□□ -1.87
RTN4-215ENST00000491592 S100A4P26447 101 aaKnown RBP3.4□□□□□ -1.87
RTN4-215ENST00000491592 FCER1GP30273 86 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 IFI27P40305 119 aaPredicted RBP3.4□□□□□ -1.87
RTN4-215ENST00000491592 INSL3P51460 131 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 TMEM258P61165 79 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 KLRD1Q13241 179 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 PLGLAQ15195 96 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 CACNA1EQ15878 2313 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 ZNF833PQ6ZTB9 187 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 FAM57AQ8TBR7 257 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 BRK1Q8WUW1 75 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 PRELID3AQ96N28 172 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 CHAC1Q9BUX1 264 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 TTTY12Q9BZ98 90 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 NXT2Q9NPJ8 142 aaKnown RBP3.4□□□□□ -1.87
RTN4-215ENST00000491592 TP73-AS1Q9UF72 201 aa3.4□□□□□ -1.87
RTN4-215ENST00000491592 GOLGB1Q14789 3259 aaKnown RBP3.39□□□□□ -1.87
RTN4-215ENST00000491592 DNAJC13O75165 2243 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 IGLV8-61A0A075B6I0 122 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 A0A096LNJ9 63 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 TRAV13-1A0A0B4J241 112 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 TMEM262E9PQX1 116 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 LHBP01229 141 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 IGKV3-15P01624 115 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 IGKCP01834 107 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 SPINK8P0C7L1 97 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 ARMS2P0C7Q2 107 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 CXCL5P42830 114 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 NMUP48645 174 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 FXYD2P54710 66 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 WFDC2Q14508 124 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 PCP2Q8IVA1 136 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 C3orf22Q8N5N4 141 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 SLC25A29Q8N8R3 303 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 TIMM8BQ9Y5J9 83 aaPredicted RBP3.39□□□□□ -1.87
RTN4-215ENST00000491592 BRWD1Q9NSI6 2320 aa3.39□□□□□ -1.87
RTN4-215ENST00000491592 HEATR1Q9H583 2144 aaKnown RBP3.38□□□□□ -1.87
RTN4-215ENST00000491592 TRBV25-1A0A075B6N4 114 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 TRGV5A0A0B4J1U4 118 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 D6R8Y8 96 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 CCDC179H3BU77 68 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 M0R378 163 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms