RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PRO1854Q9UHT4 67 aa14.62□□□□□ -0.07
SNAPC3-206ENST00000490969 LENEPQ9Y5L5 61 aa14.62□□□□□ -0.07
SNAPC3-206ENST00000490969 TSPEAR-AS2P59090 65 aa14.61□□□□□ -0.07
SNAPC3-206ENST00000490969 CITED1Q99966 193 aa14.61□□□□□ -0.07
SNAPC3-206ENST00000490969 GPHB5Q86YW7 130 aa14.61□□□□□ -0.07
SNAPC3-206ENST00000490969 CELSR1Q9NYQ6 3014 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 PPP1R17O96001 155 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 ZFAND2AQ8N6M9 145 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 TP53TG1Q9Y2A0 90 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 TRAV21A0A0B4J279 112 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 IGHV1-69DA0A0B4J2H0 117 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 OOSP1A8MZH6 123 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 SLC25A20O43772 301 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 GAGE5Q13069 117 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 GAGE6Q13070 117 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 PMVKQ15126 192 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 CFAP161Q6P656 301 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 C20orf173Q96LM9 149 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 U3KQE9 123 aa14.6□□□□□ -0.07
SNAPC3-206ENST00000490969 ATP6V0E1O15342 81 aa14.59□□□□□ -0.07
SNAPC3-206ENST00000490969 IGIPA6NJ69 53 aa14.59□□□□□ -0.07
SNAPC3-206ENST00000490969 KLK9Q2XQG4 91 aa14.59□□□□□ -0.07
SNAPC3-206ENST00000490969 KLK9Q9UKQ9 250 aa14.59□□□□□ -0.07
SNAPC3-206ENST00000490969 ANXA2RQ3ZCQ2 193 aa14.58□□□□□ -0.07
SNAPC3-206ENST00000490969 TIMD4Q96H15 378 aa14.58□□□□□ -0.07
SNAPC3-206ENST00000490969 C9JAW5 83 aa14.58□□□□□ -0.08
SNAPC3-206ENST00000490969 AJUBAQ96IF1 538 aa14.58□□□□□ -0.08
SNAPC3-206ENST00000490969 CHD6Q8TD26 2715 aa14.58□□□□□ -0.08
SNAPC3-206ENST00000490969 SRD5A1P18405 259 aa14.57□□□□□ -0.08
SNAPC3-206ENST00000490969 TMEM170BQ5T4T1 132 aa14.57□□□□□ -0.08
SNAPC3-206ENST00000490969 C9orf139Q6ZV77 190 aa14.57□□□□□ -0.08
SNAPC3-206ENST00000490969 EEF1AKMT3Q96AZ1 226 aa14.57□□□□□ -0.08
SNAPC3-206ENST00000490969 LINC00477Q96M19 166 aa14.57□□□□□ -0.08
SNAPC3-206ENST00000490969 UBR5O95071 2799 aaPredicted RBP14.57□□□□□ -0.08
SNAPC3-206ENST00000490969 ZNF843Q8N446 348 aa14.57□□□□□ -0.08
SNAPC3-206ENST00000490969 AMELXQ99217 191 aa14.57□□□□□ -0.08
SNAPC3-206ENST00000490969 M0QXV9 152 aa14.56□□□□□ -0.08
SNAPC3-206ENST00000490969 NHLRC4P0CG21 123 aaPredicted RBP14.56□□□□□ -0.08
SNAPC3-206ENST00000490969 MED14OSP0DP75 135 aa14.56□□□□□ -0.08
SNAPC3-206ENST00000490969 CRIP2P52943 208 aaPredicted RBP14.56□□□□□ -0.08
SNAPC3-206ENST00000490969 MINOS1Q5TGZ0 78 aa14.56□□□□□ -0.08
SNAPC3-206ENST00000490969 RAX2Q96IS3 184 aa14.56□□□□□ -0.08
SNAPC3-206ENST00000490969 MINOS1-NBL1R4GNA1 71 aa14.56□□□□□ -0.08
SNAPC3-206ENST00000490969 FBN2P35556 2912 aa14.56□□□□□ -0.08
SNAPC3-206ENST00000490969 ZFHX3Q15911 3703 aa14.56□□□□□ -0.08
SNAPC3-206ENST00000490969 G3V318 75 aa14.56□□□□□ -0.08
SNAPC3-206ENST00000490969 DEFB104AQ8WTQ1 72 aa14.56□□□□□ -0.08
SNAPC3-206ENST00000490969 TRPT1Q86TN4 253 aaKnown RBP14.55□□□□□ -0.08
SNAPC3-206ENST00000490969 POLQO75417 2590 aa14.55□□□□□ -0.08
SNAPC3-206ENST00000490969 B5MCH6 92 aa14.55□□□□□ -0.08
SNAPC3-206ENST00000490969 J3QQQ9 107 aa14.55□□□□□ -0.08
SNAPC3-206ENST00000490969 RHODO00212 210 aa14.55□□□□□ -0.08
SNAPC3-206ENST00000490969 RPL39P62891 51 aaKnown RBP14.55□□□□□ -0.08
SNAPC3-206ENST00000490969 TMEM95Q3KNT9 176 aa14.55□□□□□ -0.08
SNAPC3-206ENST00000490969 POM121L12Q8N7R1 296 aa14.55□□□□□ -0.08
SNAPC3-206ENST00000490969 ZNRF2Q8NHG8 242 aa14.55□□□□□ -0.08
SNAPC3-206ENST00000490969 TMEM141Q96I45 108 aa14.55□□□□□ -0.08
SNAPC3-206ENST00000490969 TRBV7-1A0A0A6YYK4 115 aa14.54□□□□□ -0.08
SNAPC3-206ENST00000490969 GNRH2O43555 120 aa14.54□□□□□ -0.08
SNAPC3-206ENST00000490969 RNASE3P12724 160 aaKnown RBP14.54□□□□□ -0.08
SNAPC3-206ENST00000490969 RPL32P62910 135 aaKnown RBP14.54□□□□□ -0.08
SNAPC3-206ENST00000490969 OR10J6PQ8NGY7 276 aa14.54□□□□□ -0.08
SNAPC3-206ENST00000490969 A4D1N5 150 aa14.54□□□□□ -0.08
SNAPC3-206ENST00000490969 ARL3P36405 182 aa14.54□□□□□ -0.08
SNAPC3-206ENST00000490969 EIF4EBP3O60516 100 aaPredicted RBP14.53□□□□□ -0.08
SNAPC3-206ENST00000490969 IGHV3-33P01772 117 aa14.53□□□□□ -0.08
SNAPC3-206ENST00000490969 LGALS3P17931 250 aaKnown RBP14.53□□□□□ -0.08
SNAPC3-206ENST00000490969 GAGE2BQ13066 116 aa14.53□□□□□ -0.08
SNAPC3-206ENST00000490969 GAGE2EQ4V326 116 aa14.53□□□□□ -0.08
SNAPC3-206ENST00000490969 TIMM17AQ99595 171 aa14.53□□□□□ -0.08
SNAPC3-206ENST00000490969 GAGE2DQ9UEU5 116 aa14.53□□□□□ -0.08
SNAPC3-206ENST00000490969 RNASE4P34096 147 aaKnown RBP14.53□□□□□ -0.08
SNAPC3-206ENST00000490969 DEFB1P60022 68 aa14.53□□□□□ -0.08
SNAPC3-206ENST00000490969 IGHV4OR15-8A0A075B7B6 117 aa14.52□□□□□ -0.08
SNAPC3-206ENST00000490969 A0A087WW49 117 aa14.52□□□□□ -0.08
SNAPC3-206ENST00000490969 SNCGO76070 127 aa14.52□□□□□ -0.08
SNAPC3-206ENST00000490969 POLR2KP53803 58 aaKnown RBP14.52□□□□□ -0.08
SNAPC3-206ENST00000490969 LINC00315P59091 139 aa14.52□□□□□ -0.08
SNAPC3-206ENST00000490969 ZNF876PQ49A33 203 aa14.52□□□□□ -0.08
SNAPC3-206ENST00000490969 C1orf122Q6ZSJ8 110 aa14.52□□□□□ -0.08
SNAPC3-206ENST00000490969 TMEM263Q8WUH6 116 aaKnown RBP14.52□□□□□ -0.09
SNAPC3-206ENST00000490969 KIF25-AS1Q9Y6Z4 181 aa14.52□□□□□ -0.09
SNAPC3-206ENST00000490969 MUC4Q99102 2169 aa14.51□□□□□ -0.09
SNAPC3-206ENST00000490969 TRAV4A0A0B4J268 109 aa14.51□□□□□ -0.09
SNAPC3-206ENST00000490969 OVOL1O14753 267 aa14.51□□□□□ -0.09
SNAPC3-206ENST00000490969 NDUFV3P56181 108 aaKnown RBP14.51□□□□□ -0.09
SNAPC3-206ENST00000490969 H7C2G1 150 aa14.5□□□□□ -0.09
SNAPC3-206ENST00000490969 P0DMU3 169 aa14.5□□□□□ -0.09
SNAPC3-206ENST00000490969 FAM231AP0DMU4 169 aa14.5□□□□□ -0.09
SNAPC3-206ENST00000490969 FAM231CP0DMU5 169 aa14.5□□□□□ -0.09
SNAPC3-206ENST00000490969 NTN5Q8WTR8 489 aaPredicted RBP14.5□□□□□ -0.09
SNAPC3-206ENST00000490969 VCYO14598 125 aa14.5□□□□□ -0.09
SNAPC3-206ENST00000490969 CRLF1O75462 422 aa14.5□□□□□ -0.09
SNAPC3-206ENST00000490969 NXPH4O95158 308 aa14.5□□□□□ -0.09
SNAPC3-206ENST00000490969 ZFP36P26651 326 aaKnown RBP14.5□□□□□ -0.09
SNAPC3-206ENST00000490969 Q8N1Y9 231 aa14.5□□□□□ -0.09
SNAPC3-206ENST00000490969 ABCA2Q9BZC7 2435 aa14.49□□□□□ -0.09
SNAPC3-206ENST00000490969 A0A0B4J2C4 111 aa14.49□□□□□ -0.09
SNAPC3-206ENST00000490969 NRGNQ92686 78 aa14.49□□□□□ -0.09
SNAPC3-206ENST00000490969 SUMO4Q6EEV6 95 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms