RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 PROK1P58294 105 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 DEFB131AP59861 70 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 DEFA6Q01524 100 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 ZNF415Q09FC8 603 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 MORN3Q6PF18 240 aaPredicted RBP4.73□□□□□ -1.65
SF3A3-208ENST00000489537 TEX43Q6ZNM6 134 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 Q6ZWC4 215 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 STHQ8IWL8 128 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 TMEM61Q8N0U2 210 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 POM121L12Q8N7R1 296 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 RCHY1Q96PM5 261 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 CITED2Q99967 270 aaPredicted RBP4.73□□□□□ -1.65
SF3A3-208ENST00000489537 IGHV1-24A0A0C4DH33 117 aa4.72□□□□□ -1.65
SF3A3-208ENST00000489537 PCP4L1A6NKN8 68 aa4.72□□□□□ -1.65
SF3A3-208ENST00000489537 SYS1-DBNDD2H3BUS1 97 aa4.72□□□□□ -1.65
SF3A3-208ENST00000489537 C3orf79P0CE67 100 aa4.72□□□□□ -1.65
SF3A3-208ENST00000489537 CD28P10747 220 aa4.72□□□□□ -1.65
SF3A3-208ENST00000489537 FCER1GP30273 86 aa4.72□□□□□ -1.65
SF3A3-208ENST00000489537 LAGE3Q14657 143 aa4.72□□□□□ -1.65
SF3A3-208ENST00000489537 CD300EQ496F6 205 aaPredicted RBP4.72□□□□□ -1.65
SF3A3-208ENST00000489537 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.72□□□□□ -1.65
SF3A3-208ENST00000489537 C9orf85Q96MD7 179 aa4.72□□□□□ -1.65
SF3A3-208ENST00000489537 KIR2DL4Q99706 377 aa4.72□□□□□ -1.65
SF3A3-208ENST00000489537 MAP6D1Q9H9H5 199 aa4.72□□□□□ -1.65
SF3A3-208ENST00000489537 EDA2RQ9HAV5 297 aa4.72□□□□□ -1.65
SF3A3-208ENST00000489537 TRAV9-2A0A087WT02 112 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 TRAV12-3A0A0B4J271 114 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 KIR2DL5BA0A0G2JN68 375 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 KIR2DL5BA0A0G2JPC4 375 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 CBY3A6NI87 242 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 F6UB75 175 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 VCYO14598 125 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 NUPR1O60356 82 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 SAP30O75446 220 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 NPYP01303 97 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 IGLV1-51P01701 117 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 RNASE3P12724 160 aaKnown RBP4.71□□□□□ -1.66
SF3A3-208ENST00000489537 EVI2AP22794 236 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 DDTP30046 118 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 IFI27P40305 119 aaPredicted RBP4.71□□□□□ -1.66
SF3A3-208ENST00000489537 SUMO2P61956 95 aaKnown RBP4.71□□□□□ -1.66
SF3A3-208ENST00000489537 SMAGPQ0VAQ4 97 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 DEFB136Q30KP8 78 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 PAPPA-AS1Q5QFB9 102 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 AMTNQ6UX39 209 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 ZNF705AQ6ZN79 300 aaPredicted RBP4.71□□□□□ -1.66
SF3A3-208ENST00000489537 KIR2DL5AQ8N109 375 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 FAM19A2Q8N3H0 131 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 RNF185Q96GF1 192 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 PMCHL2Q9BQD1 86 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 TMEM208Q9BTX3 173 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 ST20Q9HBF5 79 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 C11orf21Q9P2W6 132 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 UQCR10Q9UDW1 63 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 GOLT1BQ9Y3E0 138 aa4.71□□□□□ -1.66
SF3A3-208ENST00000489537 PRKDCP78527 4128 aaKnown RBP4.71□□□□□ -1.66
SF3A3-208ENST00000489537 IGHV3-16A0A0C4DH30 117 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 TRBV6-5A0A0K0K1A5 114 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 J3KRW8 73 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 M0R2P5 195 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 SPINK13Q1W4C9 94 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 LGALS9BQ3B8N2 356 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 MUC21Q5SSG8 566 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 PRR9Q5T870 116 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 C9orf66Q5T8R8 295 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 LGALS9CQ6DKI2 356 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 ADAMTSL5Q6ZMM2 481 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 TRPT1Q86TN4 253 aaKnown RBP4.7□□□□□ -1.66
SF3A3-208ENST00000489537 GTSCR1Q86UQ5 136 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 TMEM158Q8WZ71 300 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 DUX3Q96PT4 197 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 MIEN1Q9BRT3 115 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 ZNF747Q9BV97 191 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 SMIM2Q9BVW6 85 aa4.7□□□□□ -1.66
SF3A3-208ENST00000489537 ZNF256Q9Y2P7 627 aaPredicted RBP4.7□□□□□ -1.66
SF3A3-208ENST00000489537 TIMM8BQ9Y5J9 83 aaPredicted RBP4.7□□□□□ -1.66
SF3A3-208ENST00000489537 A0A1W2PRX2 142 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 F5H697 171 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 GNRH2O43555 120 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 MGPP08493 103 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 NPSP0C0P6 89 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 BEAN1Q3B7T3 259 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 LINC01545Q5VT33 79 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 ZFP2Q6ZN57 461 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 ZNF575Q86XF7 245 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 Q8N1Y9 231 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 ZNF664Q8N3J9 261 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 C14orf178Q8N769 122 aaPredicted RBP4.69□□□□□ -1.66
SF3A3-208ENST00000489537 IFI27L1Q96BM0 104 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 DNAJC30Q96LL9 226 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 LINC01587Q99440 93 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 MSRB1Q9NZV6 116 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 PKD1L1Q8TDX9 2849 aa4.69□□□□□ -1.66
SF3A3-208ENST00000489537 MEGF8Q7Z7M0 2845 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 MUC21A0A0G2JKD1 596 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 MUC21A0A140T8X8 626 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 LOC389332A0A1B0GUA5 103 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 SMIM9A6NGZ8 99 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 KNCNA6PVL3 124 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms