RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 TP53TG1Q9Y2A0 90 aa12.32□□□□□ -0.44
MCF2L-229ENST00000488765 IGKV3-7A0A075B6H7 116 aa12.32□□□□□ -0.44
MCF2L-229ENST00000488765 TRAV8-3A0A0A6YYJ7 113 aa12.32□□□□□ -0.44
MCF2L-229ENST00000488765 TRAV12-1A0A0B4J245 112 aa12.32□□□□□ -0.44
MCF2L-229ENST00000488765 RBAKDNA6NC62 111 aa12.32□□□□□ -0.44
MCF2L-229ENST00000488765 TRIAP1O43715 76 aa12.32□□□□□ -0.44
MCF2L-229ENST00000488765 THBDP07204 575 aa12.32□□□□□ -0.44
MCF2L-229ENST00000488765 LGALS3P17931 250 aaKnown RBP12.32□□□□□ -0.44
MCF2L-229ENST00000488765 HERVK_113P63121 156 aa12.32□□□□□ -0.44
MCF2L-229ENST00000488765 LINC01560Q8TB33 94 aa12.32□□□□□ -0.44
MCF2L-229ENST00000488765 IGHV1-3A0A0C4DH29 117 aa12.31□□□□□ -0.44
MCF2L-229ENST00000488765 LGALS9O00182 355 aa12.31□□□□□ -0.44
MCF2L-229ENST00000488765 LY6HO94772 140 aa12.31□□□□□ -0.44
MCF2L-229ENST00000488765 C2CD3Q4AC94 2353 aa12.31□□□□□ -0.44
MCF2L-229ENST00000488765 IGHV7-4-1A0A0J9YVY3 117 aa12.31□□□□□ -0.44
MCF2L-229ENST00000488765 SLC25A29Q8N8R3 303 aa12.31□□□□□ -0.44
MCF2L-229ENST00000488765 MDFICQ9P1T7 246 aa12.31□□□□□ -0.44
MCF2L-229ENST00000488765 IGHV1-8P0DP01 117 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 ATXN8Q156A1 80 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 ZNRF2Q8NHG8 242 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 B9A039 149 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 NPFFO15130 113 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 C1orf162Q8NEQ5 155 aaPredicted RBP12.3□□□□□ -0.44
MCF2L-229ENST00000488765 DYNLRB1Q9NP97 96 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 J3QQQ9 107 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 TSHBP01222 138 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 ORMDL2Q53FV1 153 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 C5orf47Q569G3 176 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 NRGNQ92686 78 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 LINC00574Q9H8X3 128 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 LINC00527Q9UJ94 153 aa12.3□□□□□ -0.44
MCF2L-229ENST00000488765 CD3EP07766 207 aa12.29□□□□□ -0.44
MCF2L-229ENST00000488765 DUX5Q96PT3 197 aa12.29□□□□□ -0.44
MCF2L-229ENST00000488765 CNFNQ9BYD5 112 aa12.29□□□□□ -0.44
MCF2L-229ENST00000488765 JPT2Q9H910 190 aa12.29□□□□□ -0.44
MCF2L-229ENST00000488765 POLQO75417 2590 aa12.29□□□□□ -0.44
MCF2L-229ENST00000488765 IGLV4-69A0A075B6H9 119 aa12.29□□□□□ -0.44
MCF2L-229ENST00000488765 GRNP28799 593 aaKnown RBP12.29□□□□□ -0.44
MCF2L-229ENST00000488765 PVRIGQ6DKI7 326 aa12.29□□□□□ -0.44
MCF2L-229ENST00000488765 NACAE9PAV3 2078 aa12.29□□□□□ -0.44
MCF2L-229ENST00000488765 LINC01619G3V211 115 aa12.28□□□□□ -0.44
MCF2L-229ENST00000488765 NDPQ00604 133 aa12.28□□□□□ -0.44
MCF2L-229ENST00000488765 MSRB2Q9Y3D2 182 aa12.28□□□□□ -0.44
MCF2L-229ENST00000488765 H7C423 109 aa12.28□□□□□ -0.44
MCF2L-229ENST00000488765 NSUN5P1Q3KNT7 163 aa12.28□□□□□ -0.44
MCF2L-229ENST00000488765 LINC01559Q495D7 138 aa12.28□□□□□ -0.44
MCF2L-229ENST00000488765 USP9YO00507 2555 aaPredicted RBP12.28□□□□□ -0.44
MCF2L-229ENST00000488765 SMIM9A6NGZ8 99 aa12.28□□□□□ -0.44
MCF2L-229ENST00000488765 PDE6HQ13956 83 aa12.28□□□□□ -0.44
MCF2L-229ENST00000488765 TMEM263Q8WUH6 116 aaKnown RBP12.28□□□□□ -0.44
MCF2L-229ENST00000488765 CRYBG3Q68DQ2 2970 aa12.27□□□□□ -0.44
MCF2L-229ENST00000488765 F5H697 171 aa12.27□□□□□ -0.44
MCF2L-229ENST00000488765 UBE2E1P51965 193 aa12.27□□□□□ -0.44
MCF2L-229ENST00000488765 PRR9Q5T870 116 aa12.27□□□□□ -0.44
MCF2L-229ENST00000488765 ZNF256Q9Y2P7 627 aaPredicted RBP12.27□□□□□ -0.44
MCF2L-229ENST00000488765 LOXP28300 417 aaPredicted RBP12.27□□□□□ -0.45
MCF2L-229ENST00000488765 DAND5Q8N907 189 aa12.26□□□□□ -0.45
MCF2L-229ENST00000488765 PKD1L2Q7Z442 2459 aa12.26□□□□□ -0.45
MCF2L-229ENST00000488765 CRYGBP07316 175 aa12.26□□□□□ -0.45
MCF2L-229ENST00000488765 CSPG4Q6UVK1 2322 aa12.26□□□□□ -0.45
MCF2L-229ENST00000488765 A0A087WWL8 130 aa12.26□□□□□ -0.45
MCF2L-229ENST00000488765 MFAP4P55083 255 aa12.26□□□□□ -0.45
MCF2L-229ENST00000488765 Q8NA96 180 aa12.26□□□□□ -0.45
MCF2L-229ENST00000488765 PHLDA3Q9Y5J5 127 aa12.26□□□□□ -0.45
MCF2L-229ENST00000488765 TRBV10-2A0A0K0K1G8 114 aa12.25□□□□□ -0.45
MCF2L-229ENST00000488765 A0A0U1RRA0 63 aa12.25□□□□□ -0.45
MCF2L-229ENST00000488765 A8MZ25 164 aa12.25□□□□□ -0.45
MCF2L-229ENST00000488765 GNRH2O43555 120 aa12.25□□□□□ -0.45
MCF2L-229ENST00000488765 TMEM126AQ9H061 195 aa12.25□□□□□ -0.45
MCF2L-229ENST00000488765 CSMD2Q7Z408 3487 aa12.25□□□□□ -0.45
MCF2L-229ENST00000488765 IGLV3-9A0A075B6K5 115 aa12.24□□□□□ -0.45
MCF2L-229ENST00000488765 Q6Q795 121 aa12.24□□□□□ -0.45
MCF2L-229ENST00000488765 PSMG3-AS1Q96PY0 264 aa12.24□□□□□ -0.45
MCF2L-229ENST00000488765 NDUFA7O95182 113 aa12.24□□□□□ -0.45
MCF2L-229ENST00000488765 IGFL3Q6UXB1 125 aa12.24□□□□□ -0.45
MCF2L-229ENST00000488765 F8W735 103 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-229ENST00000488765 RNASE13Q5GAN3 156 aaKnown RBP12.24□□□□□ -0.45
MCF2L-229ENST00000488765 FAM74A4Q5TZK3 123 aa12.24□□□□□ -0.45
MCF2L-229ENST00000488765 KIR2DL5BQ8NHK3 375 aa12.24□□□□□ -0.45
MCF2L-229ENST00000488765 FANCD2OSQ96PS1 177 aa12.24□□□□□ -0.45
MCF2L-229ENST00000488765 CYSTM1Q9H1C7 97 aa12.24□□□□□ -0.45
MCF2L-229ENST00000488765 GATA4P43694 442 aa12.23□□□□□ -0.45
MCF2L-229ENST00000488765 DNAJC30Q96LL9 226 aa12.22□□□□□ -0.45
MCF2L-229ENST00000488765 hADV29S1A0JD25 119 aa12.22□□□□□ -0.45
MCF2L-229ENST00000488765 BUB1B-PAK6H3BSN5 160 aa12.22□□□□□ -0.45
MCF2L-229ENST00000488765 FLNCQ14315 2725 aa12.21□□□□□ -0.45
MCF2L-229ENST00000488765 PRRC2AP48634 2157 aaKnown RBP12.21□□□□□ -0.45
MCF2L-229ENST00000488765 CTSGP08311 255 aa12.21□□□□□ -0.45
MCF2L-229ENST00000488765 TMEM101Q96IK0 257 aa12.21□□□□□ -0.46
MCF2L-229ENST00000488765 AMELXQ99217 191 aa12.21□□□□□ -0.46
MCF2L-229ENST00000488765 C17orf100A8MU93 164 aa12.2□□□□□ -0.46
MCF2L-229ENST00000488765 TLN2Q9Y4G6 2542 aa12.2□□□□□ -0.46
MCF2L-229ENST00000488765 SMCR5Q8TEV8 140 aa12.2□□□□□ -0.46
MCF2L-229ENST00000488765 F6UB75 175 aa12.2□□□□□ -0.46
MCF2L-229ENST00000488765 TRAV25A0A0B4J276 109 aa12.19□□□□□ -0.46
MCF2L-229ENST00000488765 TMEM178BH3BS89 294 aa12.19□□□□□ -0.46
MCF2L-229ENST00000488765 SLC50A1Q9BRV3 221 aa12.19□□□□□ -0.46
MCF2L-229ENST00000488765 UTP20O75691 2785 aaKnown RBP12.19□□□□□ -0.46
MCF2L-229ENST00000488765 LRRK2Q5S007 2527 aa12.19□□□□□ -0.46
MCF2L-229ENST00000488765 RNF223E7ERA6 249 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms