RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 TPT1P13693 172 aaKnown RBP15.06■□□□□ 0
PTPN4-211ENST00000488279 LINC01559Q495D7 138 aa15.06■□□□□ 0
PTPN4-211ENST00000488279 Q5VSD8 79 aa15.06■□□□□ 0
PTPN4-211ENST00000488279 Q8N3U1 123 aa15.06■□□□□ 0
PTPN4-211ENST00000488279 SFRP2Q96HF1 295 aa15.06■□□□□ 0
PTPN4-211ENST00000488279 TMSB15BA0A087X1C1 80 aa15.05■□□□□ -0
PTPN4-211ENST00000488279 M0R381 172 aa15.05■□□□□ -0
PTPN4-211ENST00000488279 PAGE4O60829 102 aa15.05■□□□□ -0
PTPN4-211ENST00000488279 AKR1C3P42330 323 aa15.05■□□□□ -0
PTPN4-211ENST00000488279 TOR2AQ5JU69 321 aa15.05■□□□□ -0
PTPN4-211ENST00000488279 KCNRGQ8N5I3 272 aa15.05■□□□□ -0
PTPN4-211ENST00000488279 SFT2D1Q8WV19 159 aa15.05■□□□□ -0
PTPN4-211ENST00000488279 A0A087WWL8 130 aa15.04■□□□□ -0
PTPN4-211ENST00000488279 INAFM2P0DMQ5 153 aa15.04■□□□□ -0
PTPN4-211ENST00000488279 ZNF345Q14585 488 aa15.04■□□□□ -0
PTPN4-211ENST00000488279 DAZ4Q86SG3 579 aaKnown RBP15.04■□□□□ -0
PTPN4-211ENST00000488279 ZFP82Q8N141 532 aa15.04■□□□□ -0
PTPN4-211ENST00000488279 TMEM70Q9BUB7 260 aa15.04■□□□□ -0
PTPN4-211ENST00000488279 DAZ3Q9NR90 486 aaKnown RBP15.04■□□□□ -0
PTPN4-211ENST00000488279 UMAD1C9J7I0 102 aa15.03■□□□□ -0
PTPN4-211ENST00000488279 SMR3BP02814 79 aaPredicted RBP15.03■□□□□ -0
PTPN4-211ENST00000488279 S100A9P06702 114 aaKnown RBP15.03■□□□□ -0
PTPN4-211ENST00000488279 SEC11BP0C7V7 166 aa15.03■□□□□ -0
PTPN4-211ENST00000488279 URGCP-MRPS24S4R325 110 aa15.03■□□□□ -0
PTPN4-211ENST00000488279 FAM213BQ8TBF2 198 aa15.02■□□□□ -0
PTPN4-211ENST00000488279 MBD3L1Q8WWY6 194 aa15.02■□□□□ -0
PTPN4-211ENST00000488279 HMSDA8MTL9 139 aa15□□□□□ -0.01
PTPN4-211ENST00000488279 COX11Q9Y6N1 276 aa15□□□□□ -0.01
PTPN4-211ENST00000488279 VPS13BQ7Z7G8 4022 aa14.99□□□□□ -0.01
PTPN4-211ENST00000488279 SRRM2Q9UQ35 2752 aaKnown RBP14.99□□□□□ -0.01
PTPN4-211ENST00000488279 A0A0D9SG52 128 aa14.99□□□□□ -0.01
PTPN4-211ENST00000488279 TRBV10-1A0A0K0K1A3 114 aa14.99□□□□□ -0.01
PTPN4-211ENST00000488279 A0A1B0GV50 99 aa14.99□□□□□ -0.01
PTPN4-211ENST00000488279 FAM229AH3BQW9 127 aa14.99□□□□□ -0.01
PTPN4-211ENST00000488279 ZNF471Q9BX82 626 aaPredicted RBP14.99□□□□□ -0.01
PTPN4-211ENST00000488279 KANTRA0A1W2PQU2 76 aa14.98□□□□□ -0.01
PTPN4-211ENST00000488279 PFDN1O60925 122 aa14.98□□□□□ -0.01
PTPN4-211ENST00000488279 HAMPP81172 84 aa14.98□□□□□ -0.01
PTPN4-211ENST00000488279 RPL36AP83881 106 aaKnown RBP14.98□□□□□ -0.01
PTPN4-211ENST00000488279 NIT1Q86X76 327 aa14.98□□□□□ -0.01
PTPN4-211ENST00000488279 BAGE2Q86Y30 109 aa14.98□□□□□ -0.01
PTPN4-211ENST00000488279 RPL36ALQ969Q0 106 aaKnown RBP14.98□□□□□ -0.01
PTPN4-211ENST00000488279 SCO2A0A1W2PP80 73 aa14.97□□□□□ -0.01
PTPN4-211ENST00000488279 WFDC2Q14508 124 aa14.97□□□□□ -0.01
PTPN4-211ENST00000488279 RMI2Q96E14 147 aa14.97□□□□□ -0.01
PTPN4-211ENST00000488279 TRBV7-3A0A075B6L6 115 aa14.96□□□□□ -0.01
PTPN4-211ENST00000488279 LECT2O14960 151 aa14.96□□□□□ -0.01
PTPN4-211ENST00000488279 BCL2L11O43521 198 aa14.96□□□□□ -0.01
PTPN4-211ENST00000488279 C1QBP02746 253 aa14.96□□□□□ -0.01
PTPN4-211ENST00000488279 H2AFB1P0C5Y9 115 aa14.96□□□□□ -0.01
PTPN4-211ENST00000488279 KCNIP4Q6PIL6 250 aa14.96□□□□□ -0.01
PTPN4-211ENST00000488279 MLST8Q9BVC4 326 aa14.96□□□□□ -0.01
PTPN4-211ENST00000488279 A0A087WX48 190 aa14.95□□□□□ -0.02
PTPN4-211ENST00000488279 UBE2D3P61077 147 aa14.95□□□□□ -0.02
PTPN4-211ENST00000488279 UBE2D2P62837 147 aa14.95□□□□□ -0.02
PTPN4-211ENST00000488279 EIF5AP63241 154 aaKnown RBP14.95□□□□□ -0.02
PTPN4-211ENST00000488279 RPL19P84098 196 aaKnown RBP14.95□□□□□ -0.02
PTPN4-211ENST00000488279 FAM30AQ9NZY2 134 aa14.95□□□□□ -0.02
PTPN4-211ENST00000488279 KLK12Q9UKR0 248 aa14.95□□□□□ -0.02
PTPN4-211ENST00000488279 HERC1Q15751 4861 aa14.95□□□□□ -0.02
PTPN4-211ENST00000488279 CXCL1P09341 107 aa14.94□□□□□ -0.02
PTPN4-211ENST00000488279 RAB4BP61018 213 aa14.94□□□□□ -0.02
PTPN4-211ENST00000488279 ELOBQ15370 118 aa14.94□□□□□ -0.02
PTPN4-211ENST00000488279 TMUB2Q71RG4 321 aa14.94□□□□□ -0.02
PTPN4-211ENST00000488279 BAALCQ8WXS3 180 aa14.94□□□□□ -0.02
PTPN4-211ENST00000488279 CHCHD7Q9BUK0 85 aa14.94□□□□□ -0.02
PTPN4-211ENST00000488279 OR10G8Q8NGN5 311 aa14.93□□□□□ -0.02
PTPN4-211ENST00000488279 OR10AG1Q8NH19 301 aa14.93□□□□□ -0.02
PTPN4-211ENST00000488279 IGKV2D-24A0A075B6R9 120 aa14.92□□□□□ -0.02
PTPN4-211ENST00000488279 SSBP4Q9BWG4 385 aaPredicted RBP14.92□□□□□ -0.02
PTPN4-211ENST00000488279 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.91□□□□□ -0.02
PTPN4-211ENST00000488279 TMEM262E9PQX1 116 aa14.91□□□□□ -0.02
PTPN4-211ENST00000488279 ZNF56Q15929 161 aa14.91□□□□□ -0.02
PTPN4-211ENST00000488279 SPANXN1Q5VSR9 72 aa14.91□□□□□ -0.02
PTPN4-211ENST00000488279 PRR27Q6MZM9 219 aa14.91□□□□□ -0.02
PTPN4-211ENST00000488279 UBE2WQ96B02 151 aa14.91□□□□□ -0.02
PTPN4-211ENST00000488279 DNAJC30Q96LL9 226 aa14.91□□□□□ -0.02
PTPN4-211ENST00000488279 SNAI2O43623 268 aa14.9□□□□□ -0.02
PTPN4-211ENST00000488279 OR5AL1P0C617 328 aa14.9□□□□□ -0.02
PTPN4-211ENST00000488279 Q8N976 141 aa14.9□□□□□ -0.02
PTPN4-211ENST00000488279 DNAH8Q96JB1 4490 aa14.9□□□□□ -0.02
PTPN4-211ENST00000488279 TRBV6-8A0A0A6YYG3 113 aa14.89□□□□□ -0.03
PTPN4-211ENST00000488279 RPL35P42766 123 aaKnown RBP14.89□□□□□ -0.03
PTPN4-211ENST00000488279 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.89□□□□□ -0.03
PTPN4-211ENST00000488279 NEXN-AS1Q8NBZ9 246 aa14.89□□□□□ -0.03
PTPN4-211ENST00000488279 MUC21A0A0G2JKD1 596 aa14.88□□□□□ -0.03
PTPN4-211ENST00000488279 MUC21A0A140T8X8 626 aa14.88□□□□□ -0.03
PTPN4-211ENST00000488279 F5H697 171 aa14.88□□□□□ -0.03
PTPN4-211ENST00000488279 Q0VG73 95 aa14.88□□□□□ -0.03
PTPN4-211ENST00000488279 MANBALQ9NQG1 85 aa14.88□□□□□ -0.03
PTPN4-211ENST00000488279 MYCBP2O75592 4640 aa14.88□□□□□ -0.03
PTPN4-211ENST00000488279 RBFOX3A6NFN3 312 aa14.87□□□□□ -0.03
PTPN4-211ENST00000488279 SSTP61278 116 aa14.87□□□□□ -0.03
PTPN4-211ENST00000488279 Q6ZSA8 131 aa14.87□□□□□ -0.03
PTPN4-211ENST00000488279 GNG13Q9P2W3 67 aa14.87□□□□□ -0.03
PTPN4-211ENST00000488279 SMIM17P0DL12 118 aa14.86□□□□□ -0.03
PTPN4-211ENST00000488279 CCL20P78556 96 aa14.86□□□□□ -0.03
PTPN4-211ENST00000488279 ATRAIDQ6UW56 229 aa14.86□□□□□ -0.03
PTPN4-211ENST00000488279 TRAV1-1A0A0B4J248 108 aa14.85□□□□□ -0.03
PTPN4-211ENST00000488279 TEX46H3BTG2 121 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms