RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 OOSP1A8MZH6 123 aa9.64□□□□□ -0.87
VPS52-218ENST00000482399 SPINK13Q1W4C9 94 aa9.64□□□□□ -0.87
VPS52-218ENST00000482399 ZNF48Q96MX3 618 aaPredicted RBP9.64□□□□□ -0.87
VPS52-218ENST00000482399 ANAPC13Q9BS18 74 aa9.64□□□□□ -0.87
VPS52-218ENST00000482399 PMVKQ15126 192 aa9.64□□□□□ -0.87
VPS52-218ENST00000482399 ZNF876PQ49A33 203 aa9.64□□□□□ -0.87
VPS52-218ENST00000482399 MORN3Q6PF18 240 aaPredicted RBP9.64□□□□□ -0.87
VPS52-218ENST00000482399 C9orf47Q6ZRZ4 202 aa9.64□□□□□ -0.87
VPS52-218ENST00000482399 TRPT1Q86TN4 253 aaKnown RBP9.64□□□□□ -0.87
VPS52-218ENST00000482399 NEXN-AS1Q8NBZ9 246 aa9.64□□□□□ -0.87
VPS52-218ENST00000482399 TMEM190Q8WZ59 177 aa9.64□□□□□ -0.87
VPS52-218ENST00000482399 NAV2Q8IVL1 2488 aa9.63□□□□□ -0.87
VPS52-218ENST00000482399 EDN2P20800 178 aa9.63□□□□□ -0.87
VPS52-218ENST00000482399 C1QTNF4Q9BXJ3 329 aa9.63□□□□□ -0.87
VPS52-218ENST00000482399 VCX2Q9H322 139 aa9.63□□□□□ -0.87
VPS52-218ENST00000482399 ABCA12Q86UK0 2595 aa9.63□□□□□ -0.87
VPS52-218ENST00000482399 VCYO14598 125 aa9.63□□□□□ -0.87
VPS52-218ENST00000482399 TCL1BO95988 128 aa9.63□□□□□ -0.87
VPS52-218ENST00000482399 MOB4Q9Y3A3 225 aa9.63□□□□□ -0.87
VPS52-218ENST00000482399 LRRK2Q5S007 2527 aa9.63□□□□□ -0.87
VPS52-218ENST00000482399 J3QQQ9 107 aa9.62□□□□□ -0.87
VPS52-218ENST00000482399 ZNF575Q86XF7 245 aa9.62□□□□□ -0.87
VPS52-218ENST00000482399 ZFAND2AQ8N6M9 145 aa9.62□□□□□ -0.87
VPS52-218ENST00000482399 ERG28Q9UKR5 140 aa9.62□□□□□ -0.87
VPS52-218ENST00000482399 A4D1N5 150 aa9.62□□□□□ -0.87
VPS52-218ENST00000482399 TCF15Q12870 199 aa9.62□□□□□ -0.87
VPS52-218ENST00000482399 SUMO4Q6EEV6 95 aa9.62□□□□□ -0.87
VPS52-218ENST00000482399 FN1P02751 2386 aaKnown RBP9.62□□□□□ -0.87
VPS52-218ENST00000482399 TRBV20-1A0A075B6N2 111 aa9.62□□□□□ -0.87
VPS52-218ENST00000482399 ID1P41134 155 aa9.62□□□□□ -0.87
VPS52-218ENST00000482399 CFAP161Q6P656 301 aa9.62□□□□□ -0.87
VPS52-218ENST00000482399 ADORA2A-AS1P86434 159 aa9.61□□□□□ -0.87
VPS52-218ENST00000482399 PRO1854Q9UHT4 67 aa9.61□□□□□ -0.87
VPS52-218ENST00000482399 IGHV3OR16-12A0A075B7B8 117 aa9.61□□□□□ -0.87
VPS52-218ENST00000482399 CRYBA4P53673 196 aa9.61□□□□□ -0.87
VPS52-218ENST00000482399 TEX29Q8N6K0 151 aa9.61□□□□□ -0.87
VPS52-218ENST00000482399 ABCA2Q9BZC7 2435 aa9.61□□□□□ -0.87
VPS52-218ENST00000482399 PPP1R17O96001 155 aa9.61□□□□□ -0.87
VPS52-218ENST00000482399 NFE4Q86UQ8 179 aa9.61□□□□□ -0.87
VPS52-218ENST00000482399 Q8N6K4 173 aa9.61□□□□□ -0.87
VPS52-218ENST00000482399 PPDPFLQ8WWR9 84 aa9.61□□□□□ -0.87
VPS52-218ENST00000482399 TRAV12-1A0A0B4J245 112 aa9.6□□□□□ -0.87
VPS52-218ENST00000482399 A0A0J9YXV3 536 aa9.6□□□□□ -0.87
VPS52-218ENST00000482399 K7ENP7 123 aa9.6□□□□□ -0.87
VPS52-218ENST00000482399 SNCGO76070 127 aa9.6□□□□□ -0.87
VPS52-218ENST00000482399 ANKRD29Q8N6D5 301 aa9.6□□□□□ -0.87
VPS52-218ENST00000482399 C5orf56Q8N8D9 126 aa9.6□□□□□ -0.87
VPS52-218ENST00000482399 ZNF625Q96I27 306 aaPredicted RBP9.6□□□□□ -0.87
VPS52-218ENST00000482399 SIRPDQ9H106 197 aa9.6□□□□□ -0.87
VPS52-218ENST00000482399 MDFICQ9P1T7 246 aa9.6□□□□□ -0.87
VPS52-218ENST00000482399 A0A1W2PPR1 153 aa9.6□□□□□ -0.87
VPS52-218ENST00000482399 DGAT2L7PQ6IED9 249 aa9.6□□□□□ -0.87
VPS52-218ENST00000482399 CEMP1Q6PRD7 247 aaPredicted RBP9.6□□□□□ -0.87
VPS52-218ENST00000482399 NDUFA11Q86Y39 141 aa9.6□□□□□ -0.87
VPS52-218ENST00000482399 NTN5Q8WTR8 489 aaPredicted RBP9.6□□□□□ -0.87
VPS52-218ENST00000482399 NOTCH2Q04721 2471 aa9.59□□□□□ -0.87
VPS52-218ENST00000482399 SLC25A20O43772 301 aa9.59□□□□□ -0.87
VPS52-218ENST00000482399 CD28P10747 220 aa9.59□□□□□ -0.87
VPS52-218ENST00000482399 PIFOQ8TCI5 191 aa9.59□□□□□ -0.87
VPS52-218ENST00000482399 XGP55808 180 aa9.59□□□□□ -0.87
VPS52-218ENST00000482399 TTC32Q5I0X7 151 aa9.59□□□□□ -0.87
VPS52-218ENST00000482399 PAPPA-AS1Q5QFB9 102 aa9.59□□□□□ -0.87
VPS52-218ENST00000482399 IGHV4-38-2P0DP08 117 aa9.59□□□□□ -0.87
VPS52-218ENST00000482399 SRSF2Q01130 221 aaKnown RBP9.59□□□□□ -0.87
VPS52-218ENST00000482399 IGF2-ASQ6U949 168 aa9.59□□□□□ -0.87
VPS52-218ENST00000482399 COX8CQ7Z4L0 72 aa9.59□□□□□ -0.87
VPS52-218ENST00000482399 A0A0J9YY99 117 aa9.58□□□□□ -0.88
VPS52-218ENST00000482399 PRM2P04554 102 aa9.58□□□□□ -0.88
VPS52-218ENST00000482399 RNASE3P12724 160 aaKnown RBP9.58□□□□□ -0.88
VPS52-218ENST00000482399 TSPEAR-AS2P59090 65 aa9.58□□□□□ -0.88
VPS52-218ENST00000482399 CFAP126Q5VTH2 177 aa9.58□□□□□ -0.88
VPS52-218ENST00000482399 MAPK1IP1LQ8NDC0 245 aa9.58□□□□□ -0.88
VPS52-218ENST00000482399 SS18L2Q9UHA2 77 aa9.58□□□□□ -0.88
VPS52-218ENST00000482399 IGHV3-38A0A0C4DH36 116 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 KLRB1Q12918 225 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 MUSTN1Q8IVN3 82 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 AJUBAQ96IF1 538 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 DAZ1Q9NQZ3 744 aaKnown RBP9.57□□□□□ -0.88
VPS52-218ENST00000482399 ZNF580Q9UK33 172 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 CFC1BP0CG36 223 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 CFC1P0CG37 223 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 ZFAND6Q6FIF0 208 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 C10orf126Q8N4M7 172 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 DAND5Q8N907 189 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 PIEZO1Q92508 2521 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 P0DMU3 169 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 FAM231AP0DMU4 169 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 FAM231CP0DMU5 169 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 SNRPD3P62318 126 aaKnown RBP9.57□□□□□ -0.88
VPS52-218ENST00000482399 Q6ZUT4 128 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 RNF183Q96D59 192 aa9.57□□□□□ -0.88
VPS52-218ENST00000482399 B5MCH6 92 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 SMCPP49901 116 aaPredicted RBP9.56□□□□□ -0.88
VPS52-218ENST00000482399 ATP5J2P56134 94 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 SYNJ2BPP57105 145 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 GAGE2BQ13066 116 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 GAGE2EQ4V326 116 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 GAGE2DQ9UEU5 116 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms