RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 FAT2Q9NYQ8 4349 aa8.06□□□□□ -1.12
HMGN1-213ENST00000482192 A0A087WWL8 130 aa8.05□□□□□ -1.12
HMGN1-213ENST00000482192 GAGE12JA6NER3 117 aa8.05□□□□□ -1.12
HMGN1-213ENST00000482192 BCL2P10415 239 aa8.05□□□□□ -1.12
HMGN1-213ENST00000482192 GNG4P50150 75 aa8.05□□□□□ -1.12
HMGN1-213ENST00000482192 GAGE1Q13065 139 aa8.05□□□□□ -1.12
HMGN1-213ENST00000482192 GAGE4Q13068 117 aa8.05□□□□□ -1.12
HMGN1-213ENST00000482192 GAGE5Q13069 117 aa8.05□□□□□ -1.12
HMGN1-213ENST00000482192 GAGE13Q4V321 117 aa8.05□□□□□ -1.12
HMGN1-213ENST00000482192 LINC01556Q5JQF7 62 aa8.05□□□□□ -1.12
HMGN1-213ENST00000482192 C14orf178Q8N769 122 aaPredicted RBP8.05□□□□□ -1.12
HMGN1-213ENST00000482192 SMIM12Q96EX1 92 aa8.05□□□□□ -1.12
HMGN1-213ENST00000482192 TNFRSF18Q9Y5U5 241 aa8.05□□□□□ -1.12
HMGN1-213ENST00000482192 EREGO14944 169 aa8.04□□□□□ -1.12
HMGN1-213ENST00000482192 OR5AL1P0C617 328 aa8.04□□□□□ -1.12
HMGN1-213ENST00000482192 TAGLN2P37802 199 aaKnown RBP8.04□□□□□ -1.12
HMGN1-213ENST00000482192 ERVFC1-1P60608 527 aa8.04□□□□□ -1.12
HMGN1-213ENST00000482192 OR10AG1Q8NH19 301 aa8.04□□□□□ -1.12
HMGN1-213ENST00000482192 VAX2Q9UIW0 290 aa8.04□□□□□ -1.12
HMGN1-213ENST00000482192 A0A087WWC5 75 aa8.03□□□□□ -1.12
HMGN1-213ENST00000482192 SNAI2O43623 268 aa8.03□□□□□ -1.12
HMGN1-213ENST00000482192 SPANXN1Q5VSR9 72 aa8.03□□□□□ -1.12
HMGN1-213ENST00000482192 DAZAP1Q96EP5 407 aaKnown RBP8.03□□□□□ -1.12
HMGN1-213ENST00000482192 SSBP4Q9BWG4 385 aaPredicted RBP8.03□□□□□ -1.12
HMGN1-213ENST00000482192 MED9Q9NWA0 146 aa8.03□□□□□ -1.12
HMGN1-213ENST00000482192 TRBV10-1A0A0K0K1A3 114 aa8.02□□□□□ -1.13
HMGN1-213ENST00000482192 RAB19A4D1S5 217 aa8.02□□□□□ -1.13
HMGN1-213ENST00000482192 IGLV2-8P01709 118 aa8.02□□□□□ -1.13
HMGN1-213ENST00000482192 KRTAP10-2P60368 255 aa8.02□□□□□ -1.13
HMGN1-213ENST00000482192 BIN3Q9NQY0 253 aa8.02□□□□□ -1.13
HMGN1-213ENST00000482192 Q9UF83 564 aa8.02□□□□□ -1.13
HMGN1-213ENST00000482192 TRBV20OR9-2A0A075B6H5 130 aa8.01□□□□□ -1.13
HMGN1-213ENST00000482192 IBA57-AS1B1ANH7 110 aa8.01□□□□□ -1.13
HMGN1-213ENST00000482192 IGHV3-30P01768 117 aa8.01□□□□□ -1.13
HMGN1-213ENST00000482192 IGHV3-33P01772 117 aa8.01□□□□□ -1.13
HMGN1-213ENST00000482192 IGHV3-30-3P0DP02 117 aa8.01□□□□□ -1.13
HMGN1-213ENST00000482192 IGHV3-30-5P0DP03 117 aa8.01□□□□□ -1.13
HMGN1-213ENST00000482192 RPS20P60866 119 aaKnown RBP8.01□□□□□ -1.13
HMGN1-213ENST00000482192 RAB4BP61018 213 aa8.01□□□□□ -1.13
HMGN1-213ENST00000482192 ZNF56Q15929 161 aa8.01□□□□□ -1.13
HMGN1-213ENST00000482192 ALKAL2Q6UX46 152 aa8.01□□□□□ -1.13
HMGN1-213ENST00000482192 DNAH17Q9UFH2 4485 aa8.01□□□□□ -1.13
HMGN1-213ENST00000482192 A0A087WTM6 91 aa8□□□□□ -1.13
HMGN1-213ENST00000482192 MUC21A0A0G2JKD1 596 aa8□□□□□ -1.13
HMGN1-213ENST00000482192 MUC21A0A140T8X8 626 aa8□□□□□ -1.13
HMGN1-213ENST00000482192 C19orf71A6NCJ1 209 aa8□□□□□ -1.13
HMGN1-213ENST00000482192 CDK2AP2O75956 126 aa8□□□□□ -1.13
HMGN1-213ENST00000482192 P01737 135 aa8□□□□□ -1.13
HMGN1-213ENST00000482192 BLOC1S1P78537 153 aa8□□□□□ -1.13
HMGN1-213ENST00000482192 RPL36AP83881 106 aaKnown RBP8□□□□□ -1.13
HMGN1-213ENST00000482192 LAGE3Q14657 143 aa8□□□□□ -1.13
HMGN1-213ENST00000482192 OR2D3Q8NGH3 330 aa8□□□□□ -1.13
HMGN1-213ENST00000482192 RPL36ALQ969Q0 106 aaKnown RBP8□□□□□ -1.13
HMGN1-213ENST00000482192 AP1S3Q96PC3 154 aa8□□□□□ -1.13
HMGN1-213ENST00000482192 PGPEP1Q9NXJ5 209 aa8□□□□□ -1.13
HMGN1-213ENST00000482192 PKD1P98161 4303 aa7.99□□□□□ -1.13
HMGN1-213ENST00000482192 KIAA1109Q2LD37 5005 aa7.99□□□□□ -1.13
HMGN1-213ENST00000482192 TRBV7-3A0A075B6L6 115 aa7.99□□□□□ -1.13
HMGN1-213ENST00000482192 XKRY2A2RUG3 117 aa7.99□□□□□ -1.13
HMGN1-213ENST00000482192 PSCAO43653 123 aa7.99□□□□□ -1.13
HMGN1-213ENST00000482192 IGLC6P0CF74 106 aa7.99□□□□□ -1.13
HMGN1-213ENST00000482192 SMIM17P0DL12 118 aa7.99□□□□□ -1.13
HMGN1-213ENST00000482192 CDPF1Q6NVV7 123 aa7.99□□□□□ -1.13
HMGN1-213ENST00000482192 FER1L6-AS1Q8NA97 138 aa7.99□□□□□ -1.13
HMGN1-213ENST00000482192 OR10G8Q8NGN5 311 aa7.99□□□□□ -1.13
HMGN1-213ENST00000482192 TPPP3Q9BW30 176 aa7.99□□□□□ -1.13
HMGN1-213ENST00000482192 F5H697 171 aa7.98□□□□□ -1.13
HMGN1-213ENST00000482192 GZMBP10144 247 aa7.98□□□□□ -1.13
HMGN1-213ENST00000482192 UBE2D3P61077 147 aa7.98□□□□□ -1.13
HMGN1-213ENST00000482192 SSTP61278 116 aa7.98□□□□□ -1.13
HMGN1-213ENST00000482192 UBE2D2P62837 147 aa7.98□□□□□ -1.13
HMGN1-213ENST00000482192 Q9HAA7 133 aa7.98□□□□□ -1.13
HMGN1-213ENST00000482192 URGCP-MRPS24S4R325 110 aa7.98□□□□□ -1.13
HMGN1-213ENST00000482192 A0A1B0GVG6 124 aa7.97□□□□□ -1.13
HMGN1-213ENST00000482192 RBFOX3A6NFN3 312 aa7.97□□□□□ -1.13
HMGN1-213ENST00000482192 F2Z2F3 143 aa7.97□□□□□ -1.13
HMGN1-213ENST00000482192 TMEM250H0YL14 139 aa7.97□□□□□ -1.13
HMGN1-213ENST00000482192 NKX2-5P52952 324 aaPredicted RBP7.97□□□□□ -1.13
HMGN1-213ENST00000482192 CACNG7P62955 275 aa7.97□□□□□ -1.13
HMGN1-213ENST00000482192 TOR2AQ5JU69 321 aa7.97□□□□□ -1.13
HMGN1-213ENST00000482192 Q8N3U1 123 aa7.97□□□□□ -1.13
HMGN1-213ENST00000482192 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.97□□□□□ -1.13
HMGN1-213ENST00000482192 LYPD6BQ8NI32 183 aa7.97□□□□□ -1.13
HMGN1-213ENST00000482192 KIF25-AS1Q9Y6Z4 181 aa7.97□□□□□ -1.13
HMGN1-213ENST00000482192 HERC2O95714 4834 aa7.97□□□□□ -1.13
HMGN1-213ENST00000482192 TRAV8-3A0A0A6YYJ7 113 aa7.96□□□□□ -1.14
HMGN1-213ENST00000482192 NIT1Q86X76 327 aa7.96□□□□□ -1.14
HMGN1-213ENST00000482192 NEXN-AS1Q8NBZ9 246 aa7.96□□□□□ -1.14
HMGN1-213ENST00000482192 DNAH11Q96DT5 4516 aa7.95□□□□□ -1.14
HMGN1-213ENST00000482192 PKHD1P08F94 4074 aa7.95□□□□□ -1.14
HMGN1-213ENST00000482192 LCE2BO14633 110 aa7.95□□□□□ -1.14
HMGN1-213ENST00000482192 KCNIP4Q6PIL6 250 aa7.95□□□□□ -1.14
HMGN1-213ENST00000482192 DAZ4Q86SG3 579 aaKnown RBP7.95□□□□□ -1.14
HMGN1-213ENST00000482192 NUDT10Q8NFP7 164 aa7.95□□□□□ -1.14
HMGN1-213ENST00000482192 OCC1Q8TAD7 63 aa7.95□□□□□ -1.14
HMGN1-213ENST00000482192 NUDT11Q96G61 164 aa7.95□□□□□ -1.14
HMGN1-213ENST00000482192 CHCHD7Q9BUK0 85 aa7.95□□□□□ -1.14
HMGN1-213ENST00000482192 TM2D2Q9BX73 214 aa7.95□□□□□ -1.14
HMGN1-213ENST00000482192 RPP21Q9H633 154 aaKnown RBP7.95□□□□□ -1.14
HMGN1-213ENST00000482192 DAZ3Q9NR90 486 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms