RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 TRAV8-6A0A0B4J262 113 aa12.72□□□□□ -0.37
HSPG2-210ENST00000481644 K7EP13 123 aa12.72□□□□□ -0.37
HSPG2-210ENST00000481644 NKX2-5P52952 324 aaPredicted RBP12.72□□□□□ -0.37
HSPG2-210ENST00000481644 OR10J3Q5JRS4 329 aa12.72□□□□□ -0.37
HSPG2-210ENST00000481644 OR10AG1Q8NH19 301 aa12.72□□□□□ -0.37
HSPG2-210ENST00000481644 SMIM12Q96EX1 92 aa12.72□□□□□ -0.37
HSPG2-210ENST00000481644 GTSF1LQ9H1H1 148 aa12.72□□□□□ -0.37
HSPG2-210ENST00000481644 PKD1P98161 4303 aa12.71□□□□□ -0.37
HSPG2-210ENST00000481644 IGHV3-38A0A0C4DH36 116 aa12.71□□□□□ -0.37
HSPG2-210ENST00000481644 IGLV2-8P01709 118 aa12.71□□□□□ -0.37
HSPG2-210ENST00000481644 CRYGDP07320 174 aa12.71□□□□□ -0.37
HSPG2-210ENST00000481644 BLOC1S1P78537 153 aa12.71□□□□□ -0.37
HSPG2-210ENST00000481644 LELP1Q5T871 98 aa12.71□□□□□ -0.37
HSPG2-210ENST00000481644 Q6ZRN7 208 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-210ENST00000481644 DAZAP1Q96EP5 407 aaKnown RBP12.71□□□□□ -0.37
HSPG2-210ENST00000481644 SNAI2O43623 268 aa12.7□□□□□ -0.38
HSPG2-210ENST00000481644 OR5AL1P0C617 328 aa12.7□□□□□ -0.38
HSPG2-210ENST00000481644 LINC00694P0DN24 101 aa12.7□□□□□ -0.38
HSPG2-210ENST00000481644 NFE4Q86UQ8 179 aa12.7□□□□□ -0.38
HSPG2-210ENST00000481644 C10orf126Q8N4M7 172 aa12.7□□□□□ -0.38
HSPG2-210ENST00000481644 MSRB1Q9NZV6 116 aa12.7□□□□□ -0.38
HSPG2-210ENST00000481644 Q9UF83 564 aa12.7□□□□□ -0.38
HSPG2-210ENST00000481644 BOLA1Q9Y3E2 137 aa12.7□□□□□ -0.38
HSPG2-210ENST00000481644 TNFRSF18Q9Y5U5 241 aa12.7□□□□□ -0.38
HSPG2-210ENST00000481644 MUC21A0A0G2JKD1 596 aa12.69□□□□□ -0.38
HSPG2-210ENST00000481644 MUC21A0A140T8X8 626 aa12.69□□□□□ -0.38
HSPG2-210ENST00000481644 SPANXN1Q5VSR9 72 aa12.69□□□□□ -0.38
HSPG2-210ENST00000481644 SSBP4Q9BWG4 385 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-210ENST00000481644 TRBV20OR9-2A0A075B6H5 130 aa12.68□□□□□ -0.38
HSPG2-210ENST00000481644 LINC01556Q5JQF7 62 aa12.68□□□□□ -0.38
HSPG2-210ENST00000481644 OR2D3Q8NGH3 330 aa12.68□□□□□ -0.38
HSPG2-210ENST00000481644 C19orf71A6NCJ1 209 aa12.67□□□□□ -0.38
HSPG2-210ENST00000481644 C16orf90A8MZG2 172 aa12.67□□□□□ -0.38
HSPG2-210ENST00000481644 RPS20P60866 119 aaKnown RBP12.67□□□□□ -0.38
HSPG2-210ENST00000481644 BIN3Q9NQY0 253 aa12.67□□□□□ -0.38
HSPG2-210ENST00000481644 P01737 135 aa12.66□□□□□ -0.38
HSPG2-210ENST00000481644 GZMBP10144 247 aa12.66□□□□□ -0.38
HSPG2-210ENST00000481644 SSTP61278 116 aa12.66□□□□□ -0.38
HSPG2-210ENST00000481644 ZNF56Q15929 161 aa12.66□□□□□ -0.38
HSPG2-210ENST00000481644 SPATA12Q7Z6I5 190 aa12.66□□□□□ -0.38
HSPG2-210ENST00000481644 TRBV10-1A0A0K0K1A3 114 aa12.65□□□□□ -0.38
HSPG2-210ENST00000481644 RBFOX3A6NFN3 312 aa12.65□□□□□ -0.38
HSPG2-210ENST00000481644 IGHV3-30P01768 117 aa12.65□□□□□ -0.38
HSPG2-210ENST00000481644 IGHV3-33P01772 117 aa12.65□□□□□ -0.38
HSPG2-210ENST00000481644 IGHV3-30-3P0DP02 117 aa12.65□□□□□ -0.38
HSPG2-210ENST00000481644 IGHV3-30-5P0DP03 117 aa12.65□□□□□ -0.38
HSPG2-210ENST00000481644 RAB4BP61018 213 aa12.65□□□□□ -0.38
HSPG2-210ENST00000481644 FER1L6-AS1Q8NA97 138 aa12.65□□□□□ -0.38
HSPG2-210ENST00000481644 LYPD6BQ8NI32 183 aa12.65□□□□□ -0.38
HSPG2-210ENST00000481644 TPPP3Q9BW30 176 aa12.65□□□□□ -0.38
HSPG2-210ENST00000481644 A0A087WWC5 75 aa12.64□□□□□ -0.39
HSPG2-210ENST00000481644 XKRY2A2RUG3 117 aa12.64□□□□□ -0.39
HSPG2-210ENST00000481644 IGLC6P0CF74 106 aa12.64□□□□□ -0.39
HSPG2-210ENST00000481644 RPL36AP83881 106 aaKnown RBP12.64□□□□□ -0.39
HSPG2-210ENST00000481644 RPL36ALQ969Q0 106 aaKnown RBP12.64□□□□□ -0.39
HSPG2-210ENST00000481644 ERVFC1-1P60608 527 aa12.63□□□□□ -0.39
HSPG2-210ENST00000481644 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
HSPG2-210ENST00000481644 IBA57-AS1B1ANH7 110 aa12.62□□□□□ -0.39
HSPG2-210ENST00000481644 TMEM250H0YL14 139 aa12.62□□□□□ -0.39
HSPG2-210ENST00000481644 EREGO14944 169 aa12.62□□□□□ -0.39
HSPG2-210ENST00000481644 SMIM17P0DL12 118 aa12.62□□□□□ -0.39
HSPG2-210ENST00000481644 TRBV7-3A0A075B6L6 115 aa12.61□□□□□ -0.39
HSPG2-210ENST00000481644 F5H697 171 aa12.61□□□□□ -0.39
HSPG2-210ENST00000481644 KRTAP10-2P60368 255 aa12.61□□□□□ -0.39
HSPG2-210ENST00000481644 NUDT10Q8NFP7 164 aa12.61□□□□□ -0.39
HSPG2-210ENST00000481644 OCC1Q8TAD7 63 aa12.61□□□□□ -0.39
HSPG2-210ENST00000481644 NUDT11Q96G61 164 aa12.61□□□□□ -0.39
HSPG2-210ENST00000481644 DNAH11Q96DT5 4516 aa12.61□□□□□ -0.39
HSPG2-210ENST00000481644 K7EN84 100 aa12.6□□□□□ -0.39
HSPG2-210ENST00000481644 UBE2D3P61077 147 aa12.6□□□□□ -0.39
HSPG2-210ENST00000481644 UBE2D2P62837 147 aa12.6□□□□□ -0.39
HSPG2-210ENST00000481644 CACNG7P62955 275 aa12.6□□□□□ -0.39
HSPG2-210ENST00000481644 TOR2AQ5JU69 321 aa12.6□□□□□ -0.39
HSPG2-210ENST00000481644 OR10G8Q8NGN5 311 aa12.6□□□□□ -0.39
HSPG2-210ENST00000481644 Q9HAA7 133 aa12.6□□□□□ -0.39
HSPG2-210ENST00000481644 DYNC1H1Q14204 4646 aaKnown RBP12.59□□□□□ -0.39
HSPG2-210ENST00000481644 KIAA1109Q2LD37 5005 aa12.59□□□□□ -0.39
HSPG2-210ENST00000481644 F2Z2F3 143 aa12.59□□□□□ -0.39
HSPG2-210ENST00000481644 CEBPGP53567 150 aa12.59□□□□□ -0.39
HSPG2-210ENST00000481644 Q8N3U1 123 aa12.59□□□□□ -0.39
HSPG2-210ENST00000481644 NEXN-AS1Q8NBZ9 246 aa12.59□□□□□ -0.39
HSPG2-210ENST00000481644 EIF5A2Q9GZV4 153 aaKnown RBP12.59□□□□□ -0.39
HSPG2-210ENST00000481644 RNASE7Q9H1E1 156 aaKnown RBP12.59□□□□□ -0.39
HSPG2-210ENST00000481644 RPP21Q9H633 154 aaKnown RBP12.59□□□□□ -0.39
HSPG2-210ENST00000481644 KIF25-AS1Q9Y6Z4 181 aa12.59□□□□□ -0.39
HSPG2-210ENST00000481644 A0A087WTM6 91 aa12.58□□□□□ -0.4
HSPG2-210ENST00000481644 PSCAO43653 123 aa12.58□□□□□ -0.4
HSPG2-210ENST00000481644 MGPP08493 103 aa12.58□□□□□ -0.4
HSPG2-210ENST00000481644 LYZL1Q6UWQ5 148 aa12.58□□□□□ -0.4
HSPG2-210ENST00000481644 LAGE3Q14657 143 aa12.57□□□□□ -0.4
HSPG2-210ENST00000481644 FAM210AQ96ND0 272 aa12.57□□□□□ -0.4
HSPG2-210ENST00000481644 URGCP-MRPS24S4R325 110 aa12.57□□□□□ -0.4
HSPG2-210ENST00000481644 DAZ4Q86SG3 579 aaKnown RBP12.56□□□□□ -0.4
HSPG2-210ENST00000481644 DAZ3Q9NR90 486 aaKnown RBP12.56□□□□□ -0.4
HSPG2-210ENST00000481644 HERC2O95714 4834 aa12.55□□□□□ -0.4
HSPG2-210ENST00000481644 TRGC1P0CF51 173 aa12.55□□□□□ -0.4
HSPG2-210ENST00000481644 CTRLP40313 264 aa12.55□□□□□ -0.4
HSPG2-210ENST00000481644 NIT1Q86X76 327 aa12.55□□□□□ -0.4
HSPG2-210ENST00000481644 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-210ENST00000481644 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms