RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 M0R381 172 aa15.18■□□□□ 0.02
C9orf3-216ENST00000478603 RHODO00212 210 aa15.18■□□□□ 0.02
C9orf3-216ENST00000478603 PAGE4O60829 102 aa15.18■□□□□ 0.02
C9orf3-216ENST00000478603 AKR1C3P42330 323 aa15.18■□□□□ 0.02
C9orf3-216ENST00000478603 WFDC2Q14508 124 aa15.18■□□□□ 0.02
C9orf3-216ENST00000478603 LINC01559Q495D7 138 aa15.18■□□□□ 0.02
C9orf3-216ENST00000478603 FRZBQ92765 325 aa15.18■□□□□ 0.02
C9orf3-216ENST00000478603 PHLDA3Q9Y5J5 127 aa15.18■□□□□ 0.02
C9orf3-216ENST00000478603 TRBV6-1A0A0K0K1D8 114 aa15.17■□□□□ 0.02
C9orf3-216ENST00000478603 INAFM2P0DMQ5 153 aa15.17■□□□□ 0.02
C9orf3-216ENST00000478603 TPT1P13693 172 aaKnown RBP15.17■□□□□ 0.02
C9orf3-216ENST00000478603 SFRP2Q96HF1 295 aa15.17■□□□□ 0.02
C9orf3-216ENST00000478603 A0A1B0GV50 99 aa15.16■□□□□ 0.02
C9orf3-216ENST00000478603 KCNRGQ8N5I3 272 aa15.16■□□□□ 0.02
C9orf3-216ENST00000478603 TCEAL7Q9BRU2 100 aa15.16■□□□□ 0.02
C9orf3-216ENST00000478603 TM2D2Q9BX73 214 aa15.16■□□□□ 0.02
C9orf3-216ENST00000478603 FAM213BQ8TBF2 198 aa15.15■□□□□ 0.02
C9orf3-216ENST00000478603 A0A087WWC5 75 aa15.14■□□□□ 0.01
C9orf3-216ENST00000478603 LECT2O14960 151 aa15.14■□□□□ 0.01
C9orf3-216ENST00000478603 SFT2D1Q8WV19 159 aa15.14■□□□□ 0.01
C9orf3-216ENST00000478603 TRAV8-3A0A0A6YYJ7 113 aa15.13■□□□□ 0.01
C9orf3-216ENST00000478603 ZNF345Q14585 488 aa15.13■□□□□ 0.01
C9orf3-216ENST00000478603 ZFP82Q8N141 532 aa15.13■□□□□ 0.01
C9orf3-216ENST00000478603 TMEM70Q9BUB7 260 aa15.13■□□□□ 0.01
C9orf3-216ENST00000478603 FAM30AQ9NZY2 134 aa15.13■□□□□ 0.01
C9orf3-216ENST00000478603 SCO2A0A1W2PP80 73 aa15.12■□□□□ 0.01
C9orf3-216ENST00000478603 SEC11BP0C7V7 166 aa15.12■□□□□ 0.01
C9orf3-216ENST00000478603 RPL19P84098 196 aaKnown RBP15.12■□□□□ 0.01
C9orf3-216ENST00000478603 MBD3L1Q8WWY6 194 aa15.12■□□□□ 0.01
C9orf3-216ENST00000478603 DNAJC30Q96LL9 226 aa15.12■□□□□ 0.01
C9orf3-216ENST00000478603 DNAH8Q96JB1 4490 aa15.12■□□□□ 0.01
C9orf3-216ENST00000478603 NIT1Q86X76 327 aa15.11■□□□□ 0.01
C9orf3-216ENST00000478603 ZNF471Q9BX82 626 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-216ENST00000478603 VPS13BQ7Z7G8 4022 aa15.1■□□□□ 0.01
C9orf3-216ENST00000478603 TOR2AQ5JU69 321 aa15.1■□□□□ 0.01
C9orf3-216ENST00000478603 URGCP-MRPS24S4R325 110 aa15.1■□□□□ 0.01
C9orf3-216ENST00000478603 UMAD1C9J7I0 102 aa15.09■□□□□ 0.01
C9orf3-216ENST00000478603 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.08■□□□□ 0
C9orf3-216ENST00000478603 HMSDA8MTL9 139 aa15.08■□□□□ 0
C9orf3-216ENST00000478603 BCL2L11O43521 198 aa15.08■□□□□ 0
C9orf3-216ENST00000478603 OR10AG1Q8NH19 301 aa15.08■□□□□ 0
C9orf3-216ENST00000478603 BAALCQ8WXS3 180 aa15.08■□□□□ 0
C9orf3-216ENST00000478603 KLK12Q9UKR0 248 aa15.08■□□□□ 0
C9orf3-216ENST00000478603 FLG2Q5D862 2391 aaPredicted RBP15.07■□□□□ 0
C9orf3-216ENST00000478603 A0A0D9SG52 128 aa15.07■□□□□ 0
C9orf3-216ENST00000478603 TRBV10-1A0A0K0K1A3 114 aa15.07■□□□□ 0
C9orf3-216ENST00000478603 KANTRA0A1W2PQU2 76 aa15.07■□□□□ 0
C9orf3-216ENST00000478603 PFDN1O60925 122 aa15.07■□□□□ 0
C9orf3-216ENST00000478603 S100A9P06702 114 aaKnown RBP15.07■□□□□ 0
C9orf3-216ENST00000478603 UBE2D3P61077 147 aa15.07■□□□□ 0
C9orf3-216ENST00000478603 UBE2D2P62837 147 aa15.07■□□□□ 0
C9orf3-216ENST00000478603 RPL36AP83881 106 aaKnown RBP15.07■□□□□ 0
C9orf3-216ENST00000478603 BAGE2Q86Y30 109 aa15.07■□□□□ 0
C9orf3-216ENST00000478603 RPL36ALQ969Q0 106 aaKnown RBP15.07■□□□□ 0
C9orf3-216ENST00000478603 MLST8Q9BVC4 326 aa15.07■□□□□ 0
C9orf3-216ENST00000478603 MUC21A0A0G2JKD1 596 aa15.06■□□□□ 0
C9orf3-216ENST00000478603 MUC21A0A140T8X8 626 aa15.06■□□□□ 0
C9orf3-216ENST00000478603 FAM229AH3BQW9 127 aa15.06■□□□□ 0
C9orf3-216ENST00000478603 TRBV7-3A0A075B6L6 115 aa15.05■□□□□ -0
C9orf3-216ENST00000478603 H2AFB1P0C5Y9 115 aa15.05■□□□□ -0
C9orf3-216ENST00000478603 ZNF56Q15929 161 aa15.05■□□□□ -0
C9orf3-216ENST00000478603 PRR27Q6MZM9 219 aa15.05■□□□□ -0
C9orf3-216ENST00000478603 HERC1Q15751 4861 aa15.04■□□□□ -0
C9orf3-216ENST00000478603 IGKV2D-24A0A075B6R9 120 aa15.04■□□□□ -0
C9orf3-216ENST00000478603 UBE2WQ96B02 151 aa15.04■□□□□ -0
C9orf3-216ENST00000478603 RMI2Q96E14 147 aa15.04■□□□□ -0
C9orf3-216ENST00000478603 COX11Q9Y6N1 276 aa15.04■□□□□ -0
C9orf3-216ENST00000478603 A0A087WX48 190 aa15.03■□□□□ -0
C9orf3-216ENST00000478603 CXCL1P09341 107 aa15.03■□□□□ -0
C9orf3-216ENST00000478603 RAB4BP61018 213 aa15.03■□□□□ -0
C9orf3-216ENST00000478603 SSTP61278 116 aa15.03■□□□□ -0
C9orf3-216ENST00000478603 LINC01620Q4KN68 170 aa15.03■□□□□ -0
C9orf3-216ENST00000478603 TMUB2Q71RG4 321 aa15.03■□□□□ -0
C9orf3-216ENST00000478603 DMBT1Q9UGM3 2413 aaPredicted RBP15.03■□□□□ -0
C9orf3-216ENST00000478603 SNAI2O43623 268 aa15.02■□□□□ -0
C9orf3-216ENST00000478603 C1QBP02746 253 aa15.02■□□□□ -0
C9orf3-216ENST00000478603 NEXN-AS1Q8NBZ9 246 aa15.02■□□□□ -0
C9orf3-216ENST00000478603 OR10G8Q8NGN5 311 aa15.02■□□□□ -0
C9orf3-216ENST00000478603 SRRM2Q9UQ35 2752 aaKnown RBP15.01□□□□□ -0.01
C9orf3-216ENST00000478603 CCL20P78556 96 aa15.01□□□□□ -0.01
C9orf3-216ENST00000478603 KCNIP4Q6PIL6 250 aa15.01□□□□□ -0.01
C9orf3-216ENST00000478603 CHCHD7Q9BUK0 85 aa15.01□□□□□ -0.01
C9orf3-216ENST00000478603 SSBP4Q9BWG4 385 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-216ENST00000478603 TMEM262E9PQX1 116 aa15□□□□□ -0.01
C9orf3-216ENST00000478603 RPL35P42766 123 aaKnown RBP15□□□□□ -0.01
C9orf3-216ENST00000478603 SPANXN1Q5VSR9 72 aa15□□□□□ -0.01
C9orf3-216ENST00000478603 Q6ZSA8 131 aa15□□□□□ -0.01
C9orf3-216ENST00000478603 DERL1Q9BUN8 251 aa15□□□□□ -0.01
C9orf3-216ENST00000478603 TRBV6-8A0A0A6YYG3 113 aa14.99□□□□□ -0.01
C9orf3-216ENST00000478603 OR5AL1P0C617 328 aa14.99□□□□□ -0.01
C9orf3-216ENST00000478603 EIF5AP63241 154 aaKnown RBP14.99□□□□□ -0.01
C9orf3-216ENST00000478603 ELOBQ15370 118 aa14.99□□□□□ -0.01
C9orf3-216ENST00000478603 GNG13Q9P2W3 67 aa14.99□□□□□ -0.01
C9orf3-216ENST00000478603 MYCBP2O75592 4640 aa14.99□□□□□ -0.01
C9orf3-216ENST00000478603 F5H697 171 aa14.98□□□□□ -0.01
C9orf3-216ENST00000478603 RBFOX3A6NFN3 312 aa14.97□□□□□ -0.01
C9orf3-216ENST00000478603 Q8N976 141 aa14.97□□□□□ -0.01
C9orf3-216ENST00000478603 MPV17L2Q567V2 206 aa14.96□□□□□ -0.01
C9orf3-216ENST00000478603 ATRAIDQ6UW56 229 aa14.96□□□□□ -0.01
C9orf3-216ENST00000478603 C15orf54Q8N8G6 183 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms