RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 CYP4F30PQ9H0H9 118 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 MRPL35Q9NZE8 188 aaKnown RBP0.87□□□□□ -2.27
NPHP3-207ENST00000476742 ARHGAP5Q13017 1502 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 TOPBP1Q92547 1522 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 HEATR5AQ86XA9 2040 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 SCN3AQ9NY46 2000 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 HFM1A2PYH4 1435 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 MYLKQ15746 1914 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 REREQ9P2R6 1566 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 SUPT6HQ7KZ85 1726 aaKnown RBP0.86□□□□□ -2.27
NPHP3-207ENST00000476742 MAGI2Q86UL8 1455 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 RIMBP3CA6NJZ7 1639 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 RIMBP3BA6NNM3 1639 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 RIMBP3Q9UFD9 1639 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 DSCAMO60469 2012 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 CCDC88CQ9P219 2028 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 LAMB2P55268 1798 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 MAST2Q6P0Q8 1798 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 N4BP2Q86UW6 1770 aaPredicted RBP0.86□□□□□ -2.27
NPHP3-207ENST00000476742 CASZ1Q86V15 1759 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 HELZP42694 1942 aaKnown RBP0.86□□□□□ -2.27
NPHP3-207ENST00000476742 MYH4Q9Y623 1939 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 PIK3C2AO00443 1686 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 CUL7Q14999 1698 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 IGHV3-64A0A075B6Q5 118 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 TRAV3A0A0B4J244 114 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 IGHV1-18A0A0C4DH31 117 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 TRBV7-7A0A0K0K1E9 115 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 TCRBV4S1A1TA0A5B7 111 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 C7orf77A4D0Y5 90 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 C11orf86A6NJI1 115 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 SYS1-DBNDD2H3BUS1 97 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 CCL16O15467 120 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 BCE1O60756 84 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 ERC2-IT1O76042 136 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 CCKP06307 115 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 ADCYAP1P18509 176 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 ERHP84090 104 aaKnown RBP0.86□□□□□ -2.27
NPHP3-207ENST00000476742 INSL4Q14641 139 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 RHOHQ15669 191 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 Q1T7F1 81 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 ZNF791Q3KP31 576 aaPredicted RBP0.86□□□□□ -2.27
NPHP3-207ENST00000476742 SPRNQ5BIV9 151 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 C9orf116Q5BN46 136 aaPredicted RBP0.86□□□□□ -2.27
NPHP3-207ENST00000476742 BVES-AS1Q5T3Y7 98 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 TMEM170BQ5T4T1 132 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 C1orf134Q5TEV5 83 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 FAM27BQ5VT28 67 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 SLC48A1Q6P1K1 146 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 Q6ZQT0 140 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 ZNF818PQ6ZRF7 136 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 CYP2G1PQ6ZSU1 146 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 Q8N2B8 174 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 Q8N8P6 123 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 SPTSSBQ8NFR3 76 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 C18orf32Q8TCD1 76 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 C4orf3Q8WVX3 66 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 TIMM21Q9BVV7 248 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 DYNLRB1Q9NP97 96 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 MANBALQ9NQG1 85 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 NDUFA12Q9UI09 145 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 HHLA3Q9XRX5 114 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 FAM215AQ9Y5M1 114 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 SIPA1L1O43166 1804 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 NUP98P52948 1817 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 PSME4Q14997 1843 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 ATAD5Q96QE3 1844 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 C10orf71Q711Q0 1435 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 BCORL1Q5H9F3 1711 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 ARAP2Q8WZ64 1704 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 ANKRD26Q9UPS8 1709 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 DOCK1Q14185 1865 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 FANCAO15360 1455 aa0.86□□□□□ -2.27
NPHP3-207ENST00000476742 RP1L1Q8IWN7 2480 aaPredicted RBP0.86□□□□□ -2.27
NPHP3-207ENST00000476742 MYH1P12882 1939 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 MYH8P13535 1937 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 ALPK3Q96L96 1907 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 NINQ8N4C6 2090 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 DUOX2Q9NRD8 1548 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 MCM3APO60318 1980 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 KIAA2026Q5HYC2 2103 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 TRAV13-2A0A0B4J235 113 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 TRAV10A0A0B4J240 114 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 TRBV10-3A0A0K0K1G6 114 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 A6NN06 94 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 HCG22E2RYF7 251 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 E7EUB6 86 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 SIX6O95475 246 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 COX6CP09669 75 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 GLI3P10071 1580 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 CXCL8P10145 99 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 DSCR4P56555 118 aaPredicted RBP0.85□□□□□ -2.27
NPHP3-207ENST00000476742 WFDC2Q14508 124 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 NNATQ16517 81 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 C10orf128Q5T292 105 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 FP248Q71RG6 208 aaPredicted RBP0.85□□□□□ -2.27
NPHP3-207ENST00000476742 C6orf201Q7Z4U5 140 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 LINC00643Q86TS7 51 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 Q8N814 137 aa0.85□□□□□ -2.27
NPHP3-207ENST00000476742 CASKIN1Q8WXD9 1431 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms