RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SMIM3Q9BZL3 60 aa8.13□□□□□ -1.11
SKA3-206ENST00000475251 Q9UF83 564 aa8.13□□□□□ -1.11
SKA3-206ENST00000475251 IGKV3D-20A0A0C4DH25 116 aa8.12□□□□□ -1.11
SKA3-206ENST00000475251 FABP5P3A8MUU1 101 aa8.12□□□□□ -1.11
SKA3-206ENST00000475251 USP17L23D6RBM5 183 aa8.12□□□□□ -1.11
SKA3-206ENST00000475251 TMEM262E9PQX1 116 aa8.12□□□□□ -1.11
SKA3-206ENST00000475251 HMGB3O15347 200 aaKnown RBP8.12□□□□□ -1.11
SKA3-206ENST00000475251 RPL12P30050 165 aaKnown RBP8.12□□□□□ -1.11
SKA3-206ENST00000475251 CDC34P49427 236 aaPredicted RBP8.12□□□□□ -1.11
SKA3-206ENST00000475251 RAB2AP61019 212 aa8.12□□□□□ -1.11
SKA3-206ENST00000475251 C9orf163Q8N9P6 203 aa8.12□□□□□ -1.11
SKA3-206ENST00000475251 OR11H4Q8NGC9 324 aa8.12□□□□□ -1.11
SKA3-206ENST00000475251 JPT2Q9H910 190 aa8.12□□□□□ -1.11
SKA3-206ENST00000475251 EPDR1Q9UM22 224 aa8.12□□□□□ -1.11
SKA3-206ENST00000475251 H3BVH4 76 aa8.11□□□□□ -1.11
SKA3-206ENST00000475251 HLA-DQA1P01909 254 aa8.11□□□□□ -1.11
SKA3-206ENST00000475251 STAG3L2P0CL84 134 aa8.11□□□□□ -1.11
SKA3-206ENST00000475251 STAG3L3P0CL85 134 aa8.11□□□□□ -1.11
SKA3-206ENST00000475251 SUMO1P63165 101 aaKnown RBP8.11□□□□□ -1.11
SKA3-206ENST00000475251 RPL19P84098 196 aaKnown RBP8.11□□□□□ -1.11
SKA3-206ENST00000475251 MIAQ16674 131 aa8.11□□□□□ -1.11
SKA3-206ENST00000475251 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.11□□□□□ -1.11
SKA3-206ENST00000475251 ENKURQ8TC29 256 aa8.11□□□□□ -1.11
SKA3-206ENST00000475251 DPH3P1Q9H4G8 78 aa8.11□□□□□ -1.11
SKA3-206ENST00000475251 TMEM167BQ9NRX6 74 aa8.11□□□□□ -1.11
SKA3-206ENST00000475251 TRBV7-3A0A075B6L6 115 aa8.1□□□□□ -1.11
SKA3-206ENST00000475251 B4DEV8 164 aa8.1□□□□□ -1.11
SKA3-206ENST00000475251 MPC2O95563 127 aa8.1□□□□□ -1.11
SKA3-206ENST00000475251 ANGP03950 147 aaKnown RBP8.1□□□□□ -1.11
SKA3-206ENST00000475251 GCHFRP30047 84 aa8.1□□□□□ -1.11
SKA3-206ENST00000475251 DNLZQ5SXM8 178 aa8.1□□□□□ -1.11
SKA3-206ENST00000475251 ENHOQ6UWT2 76 aa8.1□□□□□ -1.11
SKA3-206ENST00000475251 C15orf54Q8N8G6 183 aa8.1□□□□□ -1.11
SKA3-206ENST00000475251 SUN5Q8TC36 379 aa8.1□□□□□ -1.11
SKA3-206ENST00000475251 SFRP2Q96HF1 295 aa8.1□□□□□ -1.11
SKA3-206ENST00000475251 PHLDA3Q9Y5J5 127 aa8.1□□□□□ -1.11
SKA3-206ENST00000475251 TRBV6-8A0A0A6YYG3 113 aa8.09□□□□□ -1.11
SKA3-206ENST00000475251 PRSS1P07477 247 aa8.09□□□□□ -1.11
SKA3-206ENST00000475251 ARMS2P0C7Q2 107 aa8.09□□□□□ -1.11
SKA3-206ENST00000475251 UBE2D3P61077 147 aa8.09□□□□□ -1.11
SKA3-206ENST00000475251 UBE2D2P62837 147 aa8.09□□□□□ -1.11
SKA3-206ENST00000475251 CLRN3Q8NCR9 226 aa8.09□□□□□ -1.11
SKA3-206ENST00000475251 KRTAP4-8Q9BYQ9 185 aa8.09□□□□□ -1.11
SKA3-206ENST00000475251 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.11
SKA3-206ENST00000475251 ARL2-SNX15V9GYD0 113 aa8.09□□□□□ -1.11
SKA3-206ENST00000475251 A0A087WWL8 130 aa8.08□□□□□ -1.12
SKA3-206ENST00000475251 SCO2A0A1W2PP80 73 aa8.08□□□□□ -1.12
SKA3-206ENST00000475251 CXorf1O96002 111 aa8.08□□□□□ -1.12
SKA3-206ENST00000475251 MBP02144 154 aa8.08□□□□□ -1.12
SKA3-206ENST00000475251 TPT1P13693 172 aaKnown RBP8.08□□□□□ -1.12
SKA3-206ENST00000475251 H2BFSP57053 126 aa8.08□□□□□ -1.12
SKA3-206ENST00000475251 OR10G8Q8NGN5 311 aa8.08□□□□□ -1.12
SKA3-206ENST00000475251 RAB24Q969Q5 203 aa8.08□□□□□ -1.12
SKA3-206ENST00000475251 RNF213Q63HN8 5207 aa8.08□□□□□ -1.12
SKA3-206ENST00000475251 A0A1W2PRE2 83 aa8.07□□□□□ -1.12
SKA3-206ENST00000475251 MPV17L2Q567V2 206 aa8.07□□□□□ -1.12
SKA3-206ENST00000475251 TMEM97Q5BJF2 176 aa8.07□□□□□ -1.12
SKA3-206ENST00000475251 ZFP82Q8N141 532 aa8.07□□□□□ -1.12
SKA3-206ENST00000475251 WFDC1Q9HC57 220 aa8.07□□□□□ -1.12
SKA3-206ENST00000475251 KRBOX1C9JBD0 128 aa8.06□□□□□ -1.12
SKA3-206ENST00000475251 M0R381 172 aa8.06□□□□□ -1.12
SKA3-206ENST00000475251 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
SKA3-206ENST00000475251 DPH3Q96FX2 82 aa8.06□□□□□ -1.12
SKA3-206ENST00000475251 RNF185Q96GF1 192 aa8.06□□□□□ -1.12
SKA3-206ENST00000475251 CHCHD5Q9BSY4 110 aa8.06□□□□□ -1.12
SKA3-206ENST00000475251 PSMG3Q9BT73 122 aaPredicted RBP8.06□□□□□ -1.12
SKA3-206ENST00000475251 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.05□□□□□ -1.12
SKA3-206ENST00000475251 M0R036 132 aa8.05□□□□□ -1.12
SKA3-206ENST00000475251 SSNA1O43805 119 aa8.05□□□□□ -1.12
SKA3-206ENST00000475251 PTTG1O95997 202 aa8.05□□□□□ -1.12
SKA3-206ENST00000475251 IFNA7P01567 189 aa8.05□□□□□ -1.12
SKA3-206ENST00000475251 RAB4BP61018 213 aa8.05□□□□□ -1.12
SKA3-206ENST00000475251 SERF2P84101 59 aa8.05□□□□□ -1.12
SKA3-206ENST00000475251 CIRBPQ14011 172 aaKnown RBP8.05□□□□□ -1.12
SKA3-206ENST00000475251 FAM162BQ5T6X4 162 aa8.05□□□□□ -1.12
SKA3-206ENST00000475251 Q86TA4 180 aa8.05□□□□□ -1.12
SKA3-206ENST00000475251 NKX6-2Q9C056 277 aaPredicted RBP8.05□□□□□ -1.12
SKA3-206ENST00000475251 ACTR3CQ9C0K3 210 aaPredicted RBP8.05□□□□□ -1.12
SKA3-206ENST00000475251 TRAV34A0A0B4J273 112 aa8.04□□□□□ -1.12
SKA3-206ENST00000475251 GRIFINA4D1Z8 144 aa8.04□□□□□ -1.12
SKA3-206ENST00000475251 INMT-MINDY4F8WBC2 141 aa8.04□□□□□ -1.12
SKA3-206ENST00000475251 CNBPP62633 177 aaKnown RBP8.04□□□□□ -1.12
SKA3-206ENST00000475251 LINC00299Q6ZSB3 139 aa8.04□□□□□ -1.12
SKA3-206ENST00000475251 C7orf33Q8WU49 177 aa8.04□□□□□ -1.12
SKA3-206ENST00000475251 HIST1H2BAQ96A08 127 aa8.04□□□□□ -1.12
SKA3-206ENST00000475251 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
SKA3-206ENST00000475251 PRR34Q9NV39 138 aa8.04□□□□□ -1.12
SKA3-206ENST00000475251 ZFP30Q9Y2G7 519 aa8.04□□□□□ -1.12
SKA3-206ENST00000475251 IGHV3-64A0A075B6Q5 118 aa8.03□□□□□ -1.12
SKA3-206ENST00000475251 PANO1I0J062 215 aa8.03□□□□□ -1.12
SKA3-206ENST00000475251 PEX7O00628 323 aa8.03□□□□□ -1.12
SKA3-206ENST00000475251 SH2D1AO60880 128 aa8.03□□□□□ -1.12
SKA3-206ENST00000475251 ZNF56Q15929 161 aa8.03□□□□□ -1.12
SKA3-206ENST00000475251 COX8CQ7Z4L0 72 aa8.03□□□□□ -1.12
SKA3-206ENST00000475251 S100ZQ8WXG8 99 aa8.03□□□□□ -1.12
SKA3-206ENST00000475251 NDUFA13Q9P0J0 144 aa8.03□□□□□ -1.12
SKA3-206ENST00000475251 TNFSF18Q9UNG2 199 aa8.03□□□□□ -1.12
SKA3-206ENST00000475251 LINC00269Q8N2A0 174 aa8.02□□□□□ -1.13
SKA3-206ENST00000475251 NEXN-AS1Q8NBZ9 246 aa8.02□□□□□ -1.13
SKA3-206ENST00000475251 LRP2P98164 4655 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms