RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 BIN3Q9NQY0 253 aa13.76□□□□□ -0.21
HLA-B-252ENST00000474381 TRBV20OR9-2A0A075B6H5 130 aa13.75□□□□□ -0.21
HLA-B-252ENST00000474381 RAB19A4D1S5 217 aa13.75□□□□□ -0.21
HLA-B-252ENST00000474381 LINC00694P0DN24 101 aa13.75□□□□□ -0.21
HLA-B-252ENST00000474381 EVI2AP22794 236 aa13.75□□□□□ -0.21
HLA-B-252ENST00000474381 FAM74A4Q5TZK3 123 aa13.75□□□□□ -0.21
HLA-B-252ENST00000474381 DAZAP1Q96EP5 407 aaKnown RBP13.75□□□□□ -0.21
HLA-B-252ENST00000474381 PKHD1P08F94 4074 aa13.74□□□□□ -0.21
HLA-B-252ENST00000474381 C19orf71A6NCJ1 209 aa13.74□□□□□ -0.21
HLA-B-252ENST00000474381 RPS20P60866 119 aaKnown RBP13.74□□□□□ -0.21
HLA-B-252ENST00000474381 LELP1Q5T871 98 aa13.74□□□□□ -0.21
HLA-B-252ENST00000474381 OR10AG1Q8NH19 301 aa13.74□□□□□ -0.21
HLA-B-252ENST00000474381 GTSF1LQ9H1H1 148 aa13.74□□□□□ -0.21
HLA-B-252ENST00000474381 PKD1P98161 4303 aa13.73□□□□□ -0.21
HLA-B-252ENST00000474381 A0A087WWL8 130 aa13.73□□□□□ -0.21
HLA-B-252ENST00000474381 TRAV8-6A0A0B4J262 113 aa13.73□□□□□ -0.21
HLA-B-252ENST00000474381 C10orf126Q8N4M7 172 aa13.73□□□□□ -0.21
HLA-B-252ENST00000474381 IGHV3-38A0A0C4DH36 116 aa13.72□□□□□ -0.21
HLA-B-252ENST00000474381 TMEM250H0YL14 139 aa13.72□□□□□ -0.21
HLA-B-252ENST00000474381 SPANXN1Q5VSR9 72 aa13.72□□□□□ -0.21
HLA-B-252ENST00000474381 NFE4Q86UQ8 179 aa13.72□□□□□ -0.21
HLA-B-252ENST00000474381 C14orf178Q8N769 122 aaPredicted RBP13.72□□□□□ -0.21
HLA-B-252ENST00000474381 TRBV10-1A0A0K0K1A3 114 aa13.71□□□□□ -0.21
HLA-B-252ENST00000474381 XKRY2A2RUG3 117 aa13.71□□□□□ -0.21
HLA-B-252ENST00000474381 GAGE12JA6NER3 117 aa13.71□□□□□ -0.21
HLA-B-252ENST00000474381 RBFOX3A6NFN3 312 aa13.71□□□□□ -0.21
HLA-B-252ENST00000474381 GAGE1Q13065 139 aa13.71□□□□□ -0.21
HLA-B-252ENST00000474381 GAGE4Q13068 117 aa13.71□□□□□ -0.21
HLA-B-252ENST00000474381 GAGE5Q13069 117 aa13.71□□□□□ -0.21
HLA-B-252ENST00000474381 GAGE13Q4V321 117 aa13.71□□□□□ -0.21
HLA-B-252ENST00000474381 LINC01556Q5JQF7 62 aa13.71□□□□□ -0.21
HLA-B-252ENST00000474381 OR10J3Q5JRS4 329 aa13.71□□□□□ -0.21
HLA-B-252ENST00000474381 Q6ZRN7 208 aaPredicted RBP13.71□□□□□ -0.21
HLA-B-252ENST00000474381 OR2D3Q8NGH3 330 aa13.71□□□□□ -0.21
HLA-B-252ENST00000474381 P01737 135 aa13.7□□□□□ -0.22
HLA-B-252ENST00000474381 IGLC6P0CF74 106 aa13.7□□□□□ -0.22
HLA-B-252ENST00000474381 A0A087WWC5 75 aa13.69□□□□□ -0.22
HLA-B-252ENST00000474381 NDUFS6O75380 124 aaKnown RBP13.69□□□□□ -0.22
HLA-B-252ENST00000474381 RAB4BP61018 213 aa13.69□□□□□ -0.22
HLA-B-252ENST00000474381 MSRB1Q9NZV6 116 aa13.69□□□□□ -0.22
HLA-B-252ENST00000474381 Q9UF83 564 aa13.69□□□□□ -0.22
HLA-B-252ENST00000474381 FER1L6-AS1Q8NA97 138 aa13.68□□□□□ -0.22
HLA-B-252ENST00000474381 AP1S3Q96PC3 154 aa13.68□□□□□ -0.22
HLA-B-252ENST00000474381 MUC21A0A0G2JKD1 596 aa13.66□□□□□ -0.22
HLA-B-252ENST00000474381 MUC21A0A140T8X8 626 aa13.66□□□□□ -0.22
HLA-B-252ENST00000474381 F2Z2F3 143 aa13.66□□□□□ -0.22
HLA-B-252ENST00000474381 GZMBP10144 247 aa13.66□□□□□ -0.22
HLA-B-252ENST00000474381 RPL36AP83881 106 aaKnown RBP13.66□□□□□ -0.22
HLA-B-252ENST00000474381 RPL36ALQ969Q0 106 aaKnown RBP13.66□□□□□ -0.22
HLA-B-252ENST00000474381 CACNG7P62955 275 aa13.65□□□□□ -0.22
HLA-B-252ENST00000474381 ZNF56Q15929 161 aa13.65□□□□□ -0.22
HLA-B-252ENST00000474381 NUDT10Q8NFP7 164 aa13.65□□□□□ -0.22
HLA-B-252ENST00000474381 OR10G8Q8NGN5 311 aa13.65□□□□□ -0.22
HLA-B-252ENST00000474381 OCC1Q8TAD7 63 aa13.65□□□□□ -0.22
HLA-B-252ENST00000474381 NUDT11Q96G61 164 aa13.65□□□□□ -0.22
HLA-B-252ENST00000474381 FAM210AQ96ND0 272 aa13.65□□□□□ -0.22
HLA-B-252ENST00000474381 TNFRSF18Q9Y5U5 241 aa13.65□□□□□ -0.22
HLA-B-252ENST00000474381 DNAH11Q96DT5 4516 aa13.65□□□□□ -0.22
HLA-B-252ENST00000474381 TRBV7-3A0A075B6L6 115 aa13.64□□□□□ -0.23
HLA-B-252ENST00000474381 K7EN84 100 aa13.64□□□□□ -0.23
HLA-B-252ENST00000474381 SMIM17P0DL12 118 aa13.64□□□□□ -0.23
HLA-B-252ENST00000474381 TOR2AQ5JU69 321 aa13.64□□□□□ -0.23
HLA-B-252ENST00000474381 TPPP3Q9BW30 176 aa13.64□□□□□ -0.23
HLA-B-252ENST00000474381 EIF5A2Q9GZV4 153 aaKnown RBP13.64□□□□□ -0.23
HLA-B-252ENST00000474381 KIF25-AS1Q9Y6Z4 181 aa13.64□□□□□ -0.23
HLA-B-252ENST00000474381 IBA57-AS1B1ANH7 110 aa13.63□□□□□ -0.23
HLA-B-252ENST00000474381 UBE2D3P61077 147 aa13.63□□□□□ -0.23
HLA-B-252ENST00000474381 UBE2D2P62837 147 aa13.63□□□□□ -0.23
HLA-B-252ENST00000474381 RPP21Q9H633 154 aaKnown RBP13.63□□□□□ -0.23
HLA-B-252ENST00000474381 DYNC1H1Q14204 4646 aaKnown RBP13.63□□□□□ -0.23
HLA-B-252ENST00000474381 ERVFC1-1P60608 527 aa13.62□□□□□ -0.23
HLA-B-252ENST00000474381 WDR73Q6P4I2 378 aa13.62□□□□□ -0.23
HLA-B-252ENST00000474381 C16orf90A8MZG2 172 aa13.61□□□□□ -0.23
HLA-B-252ENST00000474381 CTRLP40313 264 aa13.61□□□□□ -0.23
HLA-B-252ENST00000474381 SSTP61278 116 aa13.61□□□□□ -0.23
HLA-B-252ENST00000474381 LAGE3Q14657 143 aa13.61□□□□□ -0.23
HLA-B-252ENST00000474381 LYZL1Q6UWQ5 148 aa13.61□□□□□ -0.23
HLA-B-252ENST00000474381 F5H697 171 aa13.6□□□□□ -0.23
HLA-B-252ENST00000474381 EREGO14944 169 aa13.6□□□□□ -0.23
HLA-B-252ENST00000474381 IGHV3-30P01768 117 aa13.6□□□□□ -0.23
HLA-B-252ENST00000474381 IGHV3-33P01772 117 aa13.6□□□□□ -0.23
HLA-B-252ENST00000474381 TRGC1P0CF51 173 aa13.6□□□□□ -0.23
HLA-B-252ENST00000474381 IGHV3-30-3P0DP02 117 aa13.6□□□□□ -0.23
HLA-B-252ENST00000474381 IGHV3-30-5P0DP03 117 aa13.6□□□□□ -0.23
HLA-B-252ENST00000474381 FAM231DQ6ZW35 169 aa13.6□□□□□ -0.23
HLA-B-252ENST00000474381 SPATA12Q7Z6I5 190 aa13.6□□□□□ -0.23
HLA-B-252ENST00000474381 NEXN-AS1Q8NBZ9 246 aa13.6□□□□□ -0.23
HLA-B-252ENST00000474381 CNFNQ9BYD5 112 aa13.6□□□□□ -0.23
HLA-B-252ENST00000474381 RNASE7Q9H1E1 156 aaKnown RBP13.6□□□□□ -0.23
HLA-B-252ENST00000474381 TEX261Q6UWH6 196 aa13.59□□□□□ -0.23
HLA-B-252ENST00000474381 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.59□□□□□ -0.23
HLA-B-252ENST00000474381 CEBPGP53567 150 aa13.58□□□□□ -0.24
HLA-B-252ENST00000474381 SMIM7Q9BQ49 75 aa13.58□□□□□ -0.24
HLA-B-252ENST00000474381 H7C1H1 209 aa13.57□□□□□ -0.24
HLA-B-252ENST00000474381 NTF3P20783 257 aa13.57□□□□□ -0.24
HLA-B-252ENST00000474381 CHCHD7Q9BUK0 85 aa13.57□□□□□ -0.24
HLA-B-252ENST00000474381 HERC2O95714 4834 aa13.57□□□□□ -0.24
HLA-B-252ENST00000474381 A0A087WTM6 91 aa13.56□□□□□ -0.24
HLA-B-252ENST00000474381 SRP19P09132 144 aaKnown RBP13.56□□□□□ -0.24
HLA-B-252ENST00000474381 KRTAP10-2P60368 255 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms