RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PARLQ9H300 379 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 DPH3P1Q9H4G8 78 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 URGCP-MRPS24S4R325 110 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 TRAV6A0A075B6T7 132 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 A0A087WX48 190 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 PGPA6NDG6 321 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 CENPXA8MT69 81 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 A8MWV9 139 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 S100A9P06702 114 aaKnown RBP3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 PRSS1P07477 247 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 PCP4P48539 62 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 FGF8P55075 233 aaPredicted RBP3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 TAS2R45P59539 299 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 GNG5P63218 68 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 FFAR4Q5NUL3 377 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 PIK3CD-AS1Q5SR53 167 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 C14orf178Q8N769 122 aaPredicted RBP3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 C9orf163Q8N9P6 203 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 OR10G9Q8NGN4 311 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 OR2T35Q8NGX2 323 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 SGK494Q96LW2 274 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 NMES1Q9C002 83 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 MBD2Q9UBB5 411 aa3.28□□□□□ -1.88
SNRNP40-204ENST00000474025 A0A0D9SG52 128 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 C9orf118A6NHY6 69 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 USP17L23D6RBM5 183 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 C17orf112F2Z3M2 114 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 TAAR5O14804 337 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 PLA2G10O15496 165 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 GCGP01275 180 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 IL7P13232 177 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 Q0VG73 95 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 CIRBPQ14011 172 aaKnown RBP3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 ELOBQ15370 118 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 RNF151Q2KHN1 245 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 FAM74A1Q5RGS3 127 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 ENHOQ6UWT2 76 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 OR10G7Q8NGN6 311 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 NDFIP1Q9BT67 221 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 JPT2Q9H910 190 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 NUDT15Q9NV35 164 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 OR5AC2Q9NZP5 309 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 FAT4Q6V0I7 4981 aa3.27□□□□□ -1.89
SNRNP40-204ENST00000474025 IGKV3D-20A0A0C4DH25 116 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 SERTM2A0A1B0GWG4 89 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 XKRY2A2RUG3 117 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 H0YIZ8 118 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 RHODO00212 210 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 LYRM1O43325 122 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 GAS8-AS1O95177 125 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 HLA-DQA1P01909 254 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 CRPP02741 224 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 TCRBP04435 133 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 RPL19P84098 196 aaKnown RBP3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 LGALSLQ3ZCW2 172 aaPredicted RBP3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 SMUG1Q53HV7 270 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 KCNIP4Q6PIL6 250 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 PQLC2Q6ZP29 291 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 SDIM1Q6ZPB5 146 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 OR2G3Q8NGZ4 309 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 ZC2HC1AQ96GY0 325 aa3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 RBM38Q9H0Z9 239 aaKnown RBP3.26□□□□□ -1.89
SNRNP40-204ENST00000474025 CCDC160A6NGH7 325 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 H3BVH4 76 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 TRIAP1O43715 76 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 TCRAP04437 139 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 S100A4P26447 101 aaKnown RBP3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 UBE2D3P61077 147 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 CNBPP62633 177 aaKnown RBP3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 UBE2D2P62837 147 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 FLI1Q01543 452 aaPredicted RBP3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 ZFP69Q49AA0 526 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 LRRC37A5PQ49AS3 106 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 MPV17L2Q567V2 206 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 FAM74A4Q5TZK3 123 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 KRTAP26-1Q6PEX3 210 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 C15orf54Q8N8G6 183 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 C5orf17Q8NAS9 161 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 LINC01600Q96MT4 127 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 IL36BQ9NZH7 164 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 PSG8Q9UQ74 426 aa3.25□□□□□ -1.89
SNRNP40-204ENST00000474025 TRBV7-3A0A075B6L6 115 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 A0A087WYN8 130 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 TRBV6-8A0A0A6YYG3 113 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 TRBV10-1A0A0K0K1A3 114 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 TMEM262E9PQX1 116 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 F5H697 171 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 H0Y8G0 127 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 K7EQM0 130 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 PHOX2AO14813 284 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 HMGB3O15347 200 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 SIX6O95475 246 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 ANGP03950 147 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 CHTF8P0CG12 524 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 ARL14EPLP0DKL9 152 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 RAB2AP61019 212 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 RPL36AP83881 106 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 MIAQ16674 131 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 PRNTQ86SH4 94 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms