RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 GAGE1Q13065 139 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 GAGE4Q13068 117 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 GAGE5Q13069 117 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 RHEBQ15382 184 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 SP6Q3SY56 376 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 GAGE13Q4V321 117 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 EIF5AL1Q6IS14 154 aaKnown RBP3.75□□□□□ -1.81
HDAC3-206ENST00000471968 FAAP20Q6NZ36 180 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 MRPL52Q86TS9 123 aaKnown RBP3.75□□□□□ -1.81
HDAC3-206ENST00000471968 LGI3Q8N145 548 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 CYB561D1Q8N8Q1 229 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 RAB24Q969Q5 203 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 SLC25A21Q9BQT8 299 aaPredicted RBP3.75□□□□□ -1.81
HDAC3-206ENST00000471968 CHCHD7Q9BUK0 85 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 SAMD10Q9BYL1 202 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 TREM1Q9NP99 234 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.75□□□□□ -1.81
HDAC3-206ENST00000471968 LINC00474Q9P2X8 69 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 KLLNB2CW77 178 aa3.74□□□□□ -1.81
HDAC3-206ENST00000471968 TCAPO15273 167 aa3.74□□□□□ -1.81
HDAC3-206ENST00000471968 ORM2P19652 201 aa3.74□□□□□ -1.81
HDAC3-206ENST00000471968 RAB11AP62491 216 aa3.74□□□□□ -1.81
HDAC3-206ENST00000471968 RPP30P78346 268 aaKnown RBP3.74□□□□□ -1.81
HDAC3-206ENST00000471968 NHLH2Q02577 135 aa3.74□□□□□ -1.81
HDAC3-206ENST00000471968 MIAQ16674 131 aa3.74□□□□□ -1.81
HDAC3-206ENST00000471968 C2orf83Q53S99 150 aa3.74□□□□□ -1.81
HDAC3-206ENST00000471968 KRTAP26-1Q6PEX3 210 aa3.74□□□□□ -1.81
HDAC3-206ENST00000471968 LHFPL1Q86WI0 220 aa3.74□□□□□ -1.81
HDAC3-206ENST00000471968 SMIM8Q96KF7 97 aa3.74□□□□□ -1.81
HDAC3-206ENST00000471968 TP53RKQ96S44 253 aa3.74□□□□□ -1.81
HDAC3-206ENST00000471968 RPP21Q9H633 154 aaKnown RBP3.74□□□□□ -1.81
HDAC3-206ENST00000471968 C5orf51A6NDU8 294 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 TMEM262E9PQX1 116 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 MED6O75586 246 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 ANGP03950 147 aaKnown RBP3.73□□□□□ -1.81
HDAC3-206ENST00000471968 SNRPCP09234 159 aaKnown RBP3.73□□□□□ -1.81
HDAC3-206ENST00000471968 OR4E1P0C645 316 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 LINC00614P0C842 121 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 RPL7P18124 248 aaKnown RBP3.73□□□□□ -1.81
HDAC3-206ENST00000471968 S100A7P31151 101 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 RPS10P46783 165 aaKnown RBP3.73□□□□□ -1.81
HDAC3-206ENST00000471968 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 PYY3Q5JQD4 70 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 CLPSL2Q6UWE3 100 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 COX6B2Q6YFQ2 88 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 TYMSOSQ8TAI1 123 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 TMEM170AQ8WVE7 144 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 CIB3Q96Q77 187 aaPredicted RBP3.73□□□□□ -1.81
HDAC3-206ENST00000471968 SLC50A1Q9BRV3 221 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 SPXQ9BT56 116 aa3.73□□□□□ -1.81
HDAC3-206ENST00000471968 A0A087X0K7 114 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 A0A0B4J2A0 478 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 DUXBA0A1W2PPF3 345 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 CDS2O95674 445 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 IGKV1-5P01602 117 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 MBP02144 154 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 GPX1P07203 203 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 PET100P0DJ07 73 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 FGF7P21781 194 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 PCP4P48539 62 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 AKR1C1Q04828 323 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 COTL1Q14019 142 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 ZNF876PQ49A33 203 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 TMEM128Q5BJH2 165 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 MUC21Q5SSG8 566 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 S100A7AQ86SG5 101 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 SELENOHQ8IZQ5 122 aaKnown RBP3.72□□□□□ -1.81
HDAC3-206ENST00000471968 DTD1Q8TEA8 209 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 PPP1R1CQ8WVI7 109 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 TMEM147Q9BVK8 224 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 NMES1Q9C002 83 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 SMDT1Q9H4I9 107 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 RPS10P5Q9NQ39 176 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 SHPKQ9UHJ6 478 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 SLC45A2Q9UMX9 530 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 GPR132Q9UNW8 380 aa3.72□□□□□ -1.81
HDAC3-206ENST00000471968 A0A087X002 238 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 SMCO3A2RU48 225 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 PPP1R2P9O14990 202 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 SCGB1D2O95969 90 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 LINC00694P0DN24 101 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 SULT1A2P50226 295 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 ATP5IP56385 69 aaPredicted RBP3.71□□□□□ -1.82
HDAC3-206ENST00000471968 UBE2MP61081 183 aaKnown RBP3.71□□□□□ -1.82
HDAC3-206ENST00000471968 ERCC8Q13216 396 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 PRR9Q5T870 116 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 LYZL2Q7Z4W2 148 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 MITD1Q8WV92 249 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 TMED6Q8WW62 240 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 YPEL4Q96NS1 127 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 AQP10Q96PS8 301 aa3.71□□□□□ -1.82
HDAC3-206ENST00000471968 RTBDNQ9BSG5 229 aaPredicted RBP3.71□□□□□ -1.82
HDAC3-206ENST00000471968 ZNF331Q9NQX6 463 aaPredicted RBP3.71□□□□□ -1.82
HDAC3-206ENST00000471968 A0A087WWL8 130 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 C7orf77A4D0Y5 90 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 IFITM10A6NMD0 228 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 PMS2P5A8MQ11 134 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 H3BRN7 92 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 H3BTX0 84 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 220.6 ms