RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 TNFRSF6BO95407 300 aa12.77□□□□□ -0.36
HSPG2-208ENST00000471322 NPYP01303 97 aa12.77□□□□□ -0.36
HSPG2-208ENST00000471322 SMIM17P0DL12 118 aa12.77□□□□□ -0.36
HSPG2-208ENST00000471322 MDFICQ9P1T7 246 aa12.77□□□□□ -0.36
HSPG2-208ENST00000471322 NCR2O95944 276 aa12.77□□□□□ -0.37
HSPG2-208ENST00000471322 SCGB1D1O95968 90 aa12.77□□□□□ -0.37
HSPG2-208ENST00000471322 GSN-AS1Q9NRJ2 163 aa12.77□□□□□ -0.37
HSPG2-208ENST00000471322 LOC389332A0A1B0GUA5 103 aa12.76□□□□□ -0.37
HSPG2-208ENST00000471322 PPP1R17O96001 155 aa12.76□□□□□ -0.37
HSPG2-208ENST00000471322 RBMY1A1P0DJD3 496 aaKnown RBP12.76□□□□□ -0.37
HSPG2-208ENST00000471322 RBMY1CP0DJD4 496 aa12.76□□□□□ -0.37
HSPG2-208ENST00000471322 IFI27P40305 119 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-208ENST00000471322 RBMY1FQ15415 496 aaKnown RBP12.76□□□□□ -0.37
HSPG2-208ENST00000471322 DEFB125Q8N687 156 aa12.76□□□□□ -0.37
HSPG2-208ENST00000471322 C14orf178Q8N769 122 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-208ENST00000471322 NXT2Q9NPJ8 142 aaKnown RBP12.76□□□□□ -0.37
HSPG2-208ENST00000471322 DNAH9Q9NYC9 4486 aa12.75□□□□□ -0.37
HSPG2-208ENST00000471322 AGRNO00468 2067 aa12.75□□□□□ -0.37
HSPG2-208ENST00000471322 IGHV1-24A0A0C4DH33 117 aa12.75□□□□□ -0.37
HSPG2-208ENST00000471322 PRSS47A8MTI9 375 aa12.75□□□□□ -0.37
HSPG2-208ENST00000471322 S100A12P80511 92 aa12.75□□□□□ -0.37
HSPG2-208ENST00000471322 POM121L12Q8N7R1 296 aa12.75□□□□□ -0.37
HSPG2-208ENST00000471322 LINC01587Q99440 93 aa12.75□□□□□ -0.37
HSPG2-208ENST00000471322 SPRY2O43597 315 aa12.74□□□□□ -0.37
HSPG2-208ENST00000471322 KRTDAPP60985 99 aa12.74□□□□□ -0.37
HSPG2-208ENST00000471322 PIK3CD-AS1Q5SR53 167 aa12.73□□□□□ -0.37
HSPG2-208ENST00000471322 PTH2Q96A98 100 aa12.73□□□□□ -0.37
HSPG2-208ENST00000471322 C19orf73Q9NVV2 129 aa12.73□□□□□ -0.37
HSPG2-208ENST00000471322 HSPB8Q9UJY1 196 aa12.73□□□□□ -0.37
HSPG2-208ENST00000471322 LEPROTL1O95214 131 aa12.73□□□□□ -0.37
HSPG2-208ENST00000471322 ZNF415Q09FC8 603 aa12.73□□□□□ -0.37
HSPG2-208ENST00000471322 NRACQ8N912 160 aa12.73□□□□□ -0.37
HSPG2-208ENST00000471322 KIF25-AS1Q9Y6Z4 181 aa12.73□□□□□ -0.37
HSPG2-208ENST00000471322 LINC01546A6NGU7 62 aa12.72□□□□□ -0.37
HSPG2-208ENST00000471322 MORN3Q6PF18 240 aaPredicted RBP12.72□□□□□ -0.37
HSPG2-208ENST00000471322 Q8N8P6 123 aa12.72□□□□□ -0.37
HSPG2-208ENST00000471322 C20orf78Q9BR46 151 aa12.72□□□□□ -0.37
HSPG2-208ENST00000471322 TMEM208Q9BTX3 173 aa12.72□□□□□ -0.37
HSPG2-208ENST00000471322 XCL2Q9UBD3 114 aa12.72□□□□□ -0.37
HSPG2-208ENST00000471322 MGPP08493 103 aa12.71□□□□□ -0.37
HSPG2-208ENST00000471322 C3orf79P0CE67 100 aa12.71□□□□□ -0.37
HSPG2-208ENST00000471322 HTN1P15515 57 aa12.71□□□□□ -0.37
HSPG2-208ENST00000471322 GATA1P15976 413 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-208ENST00000471322 GTSCR1Q86UQ5 136 aa12.71□□□□□ -0.37
HSPG2-208ENST00000471322 SPXQ9BT56 116 aa12.71□□□□□ -0.37
HSPG2-208ENST00000471322 C1QTNF4Q9BXJ3 329 aa12.71□□□□□ -0.37
HSPG2-208ENST00000471322 TRAV26-2A0A0B4J265 109 aa12.7□□□□□ -0.38
HSPG2-208ENST00000471322 GAS8-AS1O95177 125 aa12.7□□□□□ -0.38
HSPG2-208ENST00000471322 BTF3P20290 206 aaKnown RBP12.7□□□□□ -0.38
HSPG2-208ENST00000471322 PMCHL1Q16048 86 aa12.7□□□□□ -0.38
HSPG2-208ENST00000471322 ZNF876PQ49A33 203 aa12.7□□□□□ -0.38
HSPG2-208ENST00000471322 WFDC10AQ9H1F0 79 aa12.7□□□□□ -0.38
HSPG2-208ENST00000471322 M0R2P5 195 aa12.7□□□□□ -0.38
HSPG2-208ENST00000471322 LINC00315P59091 139 aa12.7□□□□□ -0.38
HSPG2-208ENST00000471322 CDPF1Q6NVV7 123 aa12.69□□□□□ -0.38
HSPG2-208ENST00000471322 TMEM70Q9BUB7 260 aa12.69□□□□□ -0.38
HSPG2-208ENST00000471322 GOLT1BQ9Y3E0 138 aa12.69□□□□□ -0.38
HSPG2-208ENST00000471322 NBEAL2Q6ZNJ1 2754 aa12.69□□□□□ -0.38
HSPG2-208ENST00000471322 HBDP02042 147 aa12.68□□□□□ -0.38
HSPG2-208ENST00000471322 IGHV4-30-4P0DP06 118 aa12.68□□□□□ -0.38
HSPG2-208ENST00000471322 C1orf158Q8N1D5 194 aa12.68□□□□□ -0.38
HSPG2-208ENST00000471322 RASL10AQ92737 203 aa12.68□□□□□ -0.38
HSPG2-208ENST00000471322 NDUFAF3Q9BU61 184 aa12.68□□□□□ -0.38
HSPG2-208ENST00000471322 MAP1LC3CQ9BXW4 147 aa12.68□□□□□ -0.38
HSPG2-208ENST00000471322 PCP4L1A6NKN8 68 aa12.67□□□□□ -0.38
HSPG2-208ENST00000471322 K7EMI3 77 aa12.67□□□□□ -0.38
HSPG2-208ENST00000471322 SUMO2P61956 95 aaKnown RBP12.67□□□□□ -0.38
HSPG2-208ENST00000471322 JPT2Q9H910 190 aa12.67□□□□□ -0.38
HSPG2-208ENST00000471322 IGLV2-18A0A075B6J9 118 aa12.66□□□□□ -0.38
HSPG2-208ENST00000471322 A0A087WWL8 130 aa12.66□□□□□ -0.38
HSPG2-208ENST00000471322 A8MWV9 139 aa12.66□□□□□ -0.38
HSPG2-208ENST00000471322 F5H697 171 aa12.66□□□□□ -0.38
HSPG2-208ENST00000471322 CRYGDP07320 174 aa12.66□□□□□ -0.38
HSPG2-208ENST00000471322 C11orf72Q8NBR9 251 aa12.66□□□□□ -0.38
HSPG2-208ENST00000471322 RPL32P62910 135 aaKnown RBP12.66□□□□□ -0.38
HSPG2-208ENST00000471322 SMIM2Q9BVW6 85 aa12.66□□□□□ -0.38
HSPG2-208ENST00000471322 MUC4Q99102 2169 aa12.65□□□□□ -0.38
HSPG2-208ENST00000471322 C20orf202A1L168 122 aa12.65□□□□□ -0.38
HSPG2-208ENST00000471322 RPL35AP18077 110 aaKnown RBP12.65□□□□□ -0.38
HSPG2-208ENST00000471322 FCER1GP30273 86 aa12.65□□□□□ -0.38
HSPG2-208ENST00000471322 PKIAP61925 76 aa12.65□□□□□ -0.38
HSPG2-208ENST00000471322 LAGE3Q14657 143 aa12.65□□□□□ -0.38
HSPG2-208ENST00000471322 SUMO4Q6EEV6 95 aa12.65□□□□□ -0.38
HSPG2-208ENST00000471322 TEX43Q6ZNM6 134 aa12.65□□□□□ -0.38
HSPG2-208ENST00000471322 Q8N976 141 aa12.65□□□□□ -0.38
HSPG2-208ENST00000471322 HUWE1Q7Z6Z7 4374 aaKnown RBP12.64□□□□□ -0.39
HSPG2-208ENST00000471322 SYS1-DBNDD2H3BUS1 97 aa12.64□□□□□ -0.39
HSPG2-208ENST00000471322 GIG44P09565 113 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-208ENST00000471322 FAM74A4Q5TZK3 123 aa12.64□□□□□ -0.39
HSPG2-208ENST00000471322 PET117Q6UWS5 81 aa12.64□□□□□ -0.39
HSPG2-208ENST00000471322 ST20Q9HBF5 79 aa12.64□□□□□ -0.39
HSPG2-208ENST00000471322 IGHV3OR16-12A0A075B7B8 117 aa12.63□□□□□ -0.39
HSPG2-208ENST00000471322 A0A096LNJ9 63 aa12.63□□□□□ -0.39
HSPG2-208ENST00000471322 TSTD3H0UI37 97 aa12.63□□□□□ -0.39
HSPG2-208ENST00000471322 B9D2Q9BPU9 175 aa12.63□□□□□ -0.39
HSPG2-208ENST00000471322 ZNF56Q15929 161 aa12.62□□□□□ -0.39
HSPG2-208ENST00000471322 ORMDL2Q53FV1 153 aa12.62□□□□□ -0.39
HSPG2-208ENST00000471322 SPATA12Q7Z6I5 190 aa12.62□□□□□ -0.39
HSPG2-208ENST00000471322 SBSPONQ8IVN8 264 aa12.62□□□□□ -0.39
HSPG2-208ENST00000471322 TMEM263Q8WUH6 116 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms