RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 K7EP13 123 aa10.65□□□□□ -0.7
HDAC6-218ENST00000470942 PDE6DO43924 150 aa10.65□□□□□ -0.7
HDAC6-218ENST00000470942 MED14OSP0DP75 135 aa10.65□□□□□ -0.7
HDAC6-218ENST00000470942 SPATA12Q7Z6I5 190 aa10.65□□□□□ -0.7
HDAC6-218ENST00000470942 NFE4Q86UQ8 179 aa10.65□□□□□ -0.7
HDAC6-218ENST00000470942 MED9Q9NWA0 146 aa10.65□□□□□ -0.7
HDAC6-218ENST00000470942 MSRB1Q9NZV6 116 aa10.65□□□□□ -0.7
HDAC6-218ENST00000470942 HERC2O95714 4834 aa10.65□□□□□ -0.7
HDAC6-218ENST00000470942 CXCL1P09341 107 aa10.64□□□□□ -0.71
HDAC6-218ENST00000470942 BCL2P10415 239 aa10.64□□□□□ -0.71
HDAC6-218ENST00000470942 GNG4P50150 75 aa10.64□□□□□ -0.71
HDAC6-218ENST00000470942 LELP1Q5T871 98 aa10.64□□□□□ -0.71
HDAC6-218ENST00000470942 Q6ZRN7 208 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-218ENST00000470942 C10orf126Q8N4M7 172 aa10.64□□□□□ -0.71
HDAC6-218ENST00000470942 DAZAP1Q96EP5 407 aaKnown RBP10.64□□□□□ -0.71
HDAC6-218ENST00000470942 VAX2Q9UIW0 290 aa10.64□□□□□ -0.71
HDAC6-218ENST00000470942 KIAA1109Q2LD37 5005 aa10.64□□□□□ -0.71
HDAC6-218ENST00000470942 MUC21A0A0G2JKD1 596 aa10.63□□□□□ -0.71
HDAC6-218ENST00000470942 MUC21A0A140T8X8 626 aa10.63□□□□□ -0.71
HDAC6-218ENST00000470942 SSTP61278 116 aa10.63□□□□□ -0.71
HDAC6-218ENST00000470942 ALKAL2Q6UX46 152 aa10.63□□□□□ -0.71
HDAC6-218ENST00000470942 OR10AG1Q8NH19 301 aa10.63□□□□□ -0.71
HDAC6-218ENST00000470942 Q9UF83 564 aa10.63□□□□□ -0.71
HDAC6-218ENST00000470942 BOLA1Q9Y3E2 137 aa10.63□□□□□ -0.71
HDAC6-218ENST00000470942 IGLV2-8P01709 118 aa10.62□□□□□ -0.71
HDAC6-218ENST00000470942 IGHV3-30P01768 117 aa10.62□□□□□ -0.71
HDAC6-218ENST00000470942 IGHV3-33P01772 117 aa10.62□□□□□ -0.71
HDAC6-218ENST00000470942 IGHV3-30-3P0DP02 117 aa10.62□□□□□ -0.71
HDAC6-218ENST00000470942 IGHV3-30-5P0DP03 117 aa10.62□□□□□ -0.71
HDAC6-218ENST00000470942 SPANXN1Q5VSR9 72 aa10.62□□□□□ -0.71
HDAC6-218ENST00000470942 A0A1B0GVG6 124 aa10.61□□□□□ -0.71
HDAC6-218ENST00000470942 EREGO14944 169 aa10.61□□□□□ -0.71
HDAC6-218ENST00000470942 SNAI2O43623 268 aa10.61□□□□□ -0.71
HDAC6-218ENST00000470942 OR5AL1P0C617 328 aa10.61□□□□□ -0.71
HDAC6-218ENST00000470942 LINC00694P0DN24 101 aa10.61□□□□□ -0.71
HDAC6-218ENST00000470942 TAGLN2P37802 199 aaKnown RBP10.61□□□□□ -0.71
HDAC6-218ENST00000470942 ERVFC1-1P60608 527 aa10.61□□□□□ -0.71
HDAC6-218ENST00000470942 BLOC1S1P78537 153 aa10.61□□□□□ -0.71
HDAC6-218ENST00000470942 LINC01556Q5JQF7 62 aa10.61□□□□□ -0.71
HDAC6-218ENST00000470942 SSBP4Q9BWG4 385 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-218ENST00000470942 GZMBP10144 247 aa10.6□□□□□ -0.71
HDAC6-218ENST00000470942 NKX2-5P52952 324 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-218ENST00000470942 ZNF56Q15929 161 aa10.6□□□□□ -0.71
HDAC6-218ENST00000470942 OR2D3Q8NGH3 330 aa10.6□□□□□ -0.71
HDAC6-218ENST00000470942 SMIM12Q96EX1 92 aa10.6□□□□□ -0.71
HDAC6-218ENST00000470942 KRTAP10-2P60368 255 aa10.59□□□□□ -0.71
HDAC6-218ENST00000470942 RPS20P60866 119 aaKnown RBP10.59□□□□□ -0.71
HDAC6-218ENST00000470942 TPPP3Q9BW30 176 aa10.59□□□□□ -0.71
HDAC6-218ENST00000470942 BIN3Q9NQY0 253 aa10.59□□□□□ -0.71
HDAC6-218ENST00000470942 TRBV20OR9-2A0A075B6H5 130 aa10.58□□□□□ -0.72
HDAC6-218ENST00000470942 A0A087WWC5 75 aa10.58□□□□□ -0.72
HDAC6-218ENST00000470942 C19orf71A6NCJ1 209 aa10.58□□□□□ -0.72
HDAC6-218ENST00000470942 P01737 135 aa10.58□□□□□ -0.72
HDAC6-218ENST00000470942 RAB4BP61018 213 aa10.58□□□□□ -0.72
HDAC6-218ENST00000470942 RPL36AP83881 106 aaKnown RBP10.58□□□□□ -0.72
HDAC6-218ENST00000470942 RPL36ALQ969Q0 106 aaKnown RBP10.58□□□□□ -0.72
HDAC6-218ENST00000470942 TRBV10-1A0A0K0K1A3 114 aa10.57□□□□□ -0.72
HDAC6-218ENST00000470942 RBFOX3A6NFN3 312 aa10.57□□□□□ -0.72
HDAC6-218ENST00000470942 IBA57-AS1B1ANH7 110 aa10.57□□□□□ -0.72
HDAC6-218ENST00000470942 F5H697 171 aa10.57□□□□□ -0.72
HDAC6-218ENST00000470942 PSCAO43653 123 aa10.57□□□□□ -0.72
HDAC6-218ENST00000470942 SMIM17P0DL12 118 aa10.57□□□□□ -0.72
HDAC6-218ENST00000470942 FER1L6-AS1Q8NA97 138 aa10.57□□□□□ -0.72
HDAC6-218ENST00000470942 Q9HAA7 133 aa10.57□□□□□ -0.72
HDAC6-218ENST00000470942 TRBV7-3A0A075B6L6 115 aa10.56□□□□□ -0.72
HDAC6-218ENST00000470942 XKRY2A2RUG3 117 aa10.56□□□□□ -0.72
HDAC6-218ENST00000470942 A0A087WTM6 91 aa10.55□□□□□ -0.72
HDAC6-218ENST00000470942 IGLC6P0CF74 106 aa10.55□□□□□ -0.72
HDAC6-218ENST00000470942 UBE2D3P61077 147 aa10.55□□□□□ -0.72
HDAC6-218ENST00000470942 UBE2D2P62837 147 aa10.55□□□□□ -0.72
HDAC6-218ENST00000470942 Q8N3U1 123 aa10.55□□□□□ -0.72
HDAC6-218ENST00000470942 NUDT10Q8NFP7 164 aa10.55□□□□□ -0.72
HDAC6-218ENST00000470942 NUDT11Q96G61 164 aa10.55□□□□□ -0.72
HDAC6-218ENST00000470942 AP1S3Q96PC3 154 aa10.55□□□□□ -0.72
HDAC6-218ENST00000470942 FUSP35637 526 aaKnown RBP eCLIP10.54□□□□□ -0.72
HDAC6-218ENST00000470942 CACNG7P62955 275 aa10.54□□□□□ -0.72
HDAC6-218ENST00000470942 NEXN-AS1Q8NBZ9 246 aa10.54□□□□□ -0.72
HDAC6-218ENST00000470942 OR10G8Q8NGN5 311 aa10.54□□□□□ -0.72
HDAC6-218ENST00000470942 OCC1Q8TAD7 63 aa10.54□□□□□ -0.72
HDAC6-218ENST00000470942 PGPEP1Q9NXJ5 209 aa10.54□□□□□ -0.72
HDAC6-218ENST00000470942 LRP1BQ9NZR2 4599 aa10.54□□□□□ -0.72
HDAC6-218ENST00000470942 URGCP-MRPS24S4R325 110 aa10.54□□□□□ -0.72
HDAC6-218ENST00000470942 CEBPGP53567 150 aa10.53□□□□□ -0.72
HDAC6-218ENST00000470942 DAZ4Q86SG3 579 aaKnown RBP10.53□□□□□ -0.72
HDAC6-218ENST00000470942 LYPD6BQ8NI32 183 aa10.53□□□□□ -0.72
HDAC6-218ENST00000470942 DAZ3Q9NR90 486 aaKnown RBP10.53□□□□□ -0.72
HDAC6-218ENST00000470942 KIF25-AS1Q9Y6Z4 181 aa10.53□□□□□ -0.72
HDAC6-218ENST00000470942 DNAH5Q8TE73 4624 aa10.53□□□□□ -0.72
HDAC6-218ENST00000470942 RYR1P21817 5038 aa10.52□□□□□ -0.73
HDAC6-218ENST00000470942 F2Z2F3 143 aa10.52□□□□□ -0.73
HDAC6-218ENST00000470942 TMEM250H0YL14 139 aa10.52□□□□□ -0.73
HDAC6-218ENST00000470942 MGPP08493 103 aa10.52□□□□□ -0.73
HDAC6-218ENST00000470942 LAGE3Q14657 143 aa10.52□□□□□ -0.73
HDAC6-218ENST00000470942 TOR2AQ5JU69 321 aa10.52□□□□□ -0.73
HDAC6-218ENST00000470942 LYZL1Q6UWQ5 148 aa10.52□□□□□ -0.73
HDAC6-218ENST00000470942 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-218ENST00000470942 EIF5A2Q9GZV4 153 aaKnown RBP10.52□□□□□ -0.73
HDAC6-218ENST00000470942 RNASE7Q9H1E1 156 aaKnown RBP10.52□□□□□ -0.73
HDAC6-218ENST00000470942 K7EN84 100 aa10.51□□□□□ -0.73
HDAC6-218ENST00000470942 CDK2AP2O75956 126 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms