RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 A8MTW9 85 aa8.52□□□□□ -1.05
HDAC6-217ENST00000469223 FABP5P3A8MUU1 101 aa8.52□□□□□ -1.05
HDAC6-217ENST00000469223 NXPH4O95158 308 aa8.52□□□□□ -1.05
HDAC6-217ENST00000469223 INSP01308 110 aa8.52□□□□□ -1.05
HDAC6-217ENST00000469223 LEPP41159 167 aa8.52□□□□□ -1.05
HDAC6-217ENST00000469223 Q6AWC8 147 aa8.52□□□□□ -1.05
HDAC6-217ENST00000469223 NTN5Q8WTR8 489 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-217ENST00000469223 BORCS7Q96B45 105 aa8.52□□□□□ -1.05
HDAC6-217ENST00000469223 C20orf173Q96LM9 149 aa8.52□□□□□ -1.05
HDAC6-217ENST00000469223 ODF3Q96PU9 254 aa8.52□□□□□ -1.05
HDAC6-217ENST00000469223 GFRA4Q9GZZ7 299 aa8.52□□□□□ -1.05
HDAC6-217ENST00000469223 URGCP-MRPS24S4R325 110 aa8.52□□□□□ -1.05
HDAC6-217ENST00000469223 HOXA5P20719 270 aa8.51□□□□□ -1.05
HDAC6-217ENST00000469223 NUDT10Q8NFP7 164 aa8.51□□□□□ -1.05
HDAC6-217ENST00000469223 NUDT11Q96G61 164 aa8.51□□□□□ -1.05
HDAC6-217ENST00000469223 VGLL1Q99990 258 aa8.51□□□□□ -1.05
HDAC6-217ENST00000469223 AGPAT4-IT1Q9H0P7 198 aa8.51□□□□□ -1.05
HDAC6-217ENST00000469223 RNASE7Q9H1E1 156 aaKnown RBP8.51□□□□□ -1.05
HDAC6-217ENST00000469223 NAT8BQ9UHF3 227 aa8.51□□□□□ -1.05
HDAC6-217ENST00000469223 TRBV24-1A0A075B6N3 115 aa8.5□□□□□ -1.05
HDAC6-217ENST00000469223 M0R2Z0 102 aa8.5□□□□□ -1.05
HDAC6-217ENST00000469223 GPX1P07203 203 aa8.5□□□□□ -1.05
HDAC6-217ENST00000469223 ELOBQ15370 118 aa8.5□□□□□ -1.05
HDAC6-217ENST00000469223 AMTNQ6UX39 209 aa8.5□□□□□ -1.05
HDAC6-217ENST00000469223 Q6ZSA8 131 aa8.5□□□□□ -1.05
HDAC6-217ENST00000469223 Q8TAT8 98 aa8.5□□□□□ -1.05
HDAC6-217ENST00000469223 TSKUQ8WUA8 353 aa8.5□□□□□ -1.05
HDAC6-217ENST00000469223 ZC2HC1AQ96GY0 325 aa8.5□□□□□ -1.05
HDAC6-217ENST00000469223 V9GYV3 84 aa8.5□□□□□ -1.05
HDAC6-217ENST00000469223 TRAV21A0A0B4J279 112 aa8.49□□□□□ -1.05
HDAC6-217ENST00000469223 C19orf71A6NCJ1 209 aa8.49□□□□□ -1.05
HDAC6-217ENST00000469223 PRAC2D3DTV9 90 aa8.49□□□□□ -1.05
HDAC6-217ENST00000469223 S100A8P05109 93 aa8.49□□□□□ -1.05
HDAC6-217ENST00000469223 PFN1P07737 140 aaKnown RBP8.49□□□□□ -1.05
HDAC6-217ENST00000469223 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
HDAC6-217ENST00000469223 ERCC8Q13216 396 aa8.49□□□□□ -1.05
HDAC6-217ENST00000469223 SPINK13Q1W4C9 94 aa8.49□□□□□ -1.05
HDAC6-217ENST00000469223 OR2D3Q8NGH3 330 aa8.49□□□□□ -1.05
HDAC6-217ENST00000469223 A0A096LPF7 62 aa8.48□□□□□ -1.05
HDAC6-217ENST00000469223 CRXO43186 299 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-217ENST00000469223 RAB5AP20339 215 aa8.48□□□□□ -1.05
HDAC6-217ENST00000469223 WDR73Q6P4I2 378 aa8.48□□□□□ -1.05
HDAC6-217ENST00000469223 RASL11AQ6T310 242 aa8.48□□□□□ -1.05
HDAC6-217ENST00000469223 C8orf49Q96NF6 230 aa8.48□□□□□ -1.05
HDAC6-217ENST00000469223 NOP10Q9NPE3 64 aaKnown RBP8.48□□□□□ -1.05
HDAC6-217ENST00000469223 MSRB1Q9NZV6 116 aa8.48□□□□□ -1.05
HDAC6-217ENST00000469223 TIMM8BQ9Y5J9 83 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-217ENST00000469223 A0A1B0GW15 77 aa8.47□□□□□ -1.05
HDAC6-217ENST00000469223 SMIM27A0A1W2PRY6 76 aa8.47□□□□□ -1.05
HDAC6-217ENST00000469223 COLCA2A8K830 154 aa8.47□□□□□ -1.05
HDAC6-217ENST00000469223 H3BNG1 76 aa8.47□□□□□ -1.05
HDAC6-217ENST00000469223 RS1O15537 224 aa8.47□□□□□ -1.05
HDAC6-217ENST00000469223 SH2D1AO60880 128 aa8.47□□□□□ -1.05
HDAC6-217ENST00000469223 ORM1P02763 201 aa8.47□□□□□ -1.05
HDAC6-217ENST00000469223 CRISP2P16562 243 aa8.47□□□□□ -1.05
HDAC6-217ENST00000469223 ATP5L2Q7Z4Y8 100 aa8.47□□□□□ -1.05
HDAC6-217ENST00000469223 C16orf74Q96GX8 76 aa8.47□□□□□ -1.05
HDAC6-217ENST00000469223 C1orf196B1AJZ1 125 aa8.46□□□□□ -1.06
HDAC6-217ENST00000469223 GAS8-AS1O95177 125 aa8.46□□□□□ -1.06
HDAC6-217ENST00000469223 MT-ND6P03923 174 aa8.46□□□□□ -1.06
HDAC6-217ENST00000469223 HTN1P15515 57 aa8.46□□□□□ -1.06
HDAC6-217ENST00000469223 CDKN1BP46527 198 aa8.46□□□□□ -1.06
HDAC6-217ENST00000469223 RPS10P46783 165 aaKnown RBP8.46□□□□□ -1.06
HDAC6-217ENST00000469223 RAB5BP61020 215 aa8.46□□□□□ -1.06
HDAC6-217ENST00000469223 SCXQ7RTU7 201 aa8.46□□□□□ -1.06
HDAC6-217ENST00000469223 TMEM256Q8N2U0 113 aa8.46□□□□□ -1.06
HDAC6-217ENST00000469223 KCNS1Q96KK3 526 aa8.46□□□□□ -1.06
HDAC6-217ENST00000469223 PYGO2Q9BRQ0 406 aa8.46□□□□□ -1.06
HDAC6-217ENST00000469223 TRAV12-2A0A075B6T6 113 aa8.45□□□□□ -1.06
HDAC6-217ENST00000469223 TGIF2-C20orf24A0A0A6YYL0 155 aa8.45□□□□□ -1.06
HDAC6-217ENST00000469223 LRCOL1A6NCL2 159 aa8.45□□□□□ -1.06
HDAC6-217ENST00000469223 HIGD1CA8MV81 97 aa8.45□□□□□ -1.06
HDAC6-217ENST00000469223 F2Z2F3 143 aa8.45□□□□□ -1.06
HDAC6-217ENST00000469223 TYMSP04818 313 aa8.45□□□□□ -1.06
HDAC6-217ENST00000469223 CXCL1P09341 107 aa8.45□□□□□ -1.06
HDAC6-217ENST00000469223 KIR3DS1Q14943 382 aa8.45□□□□□ -1.06
HDAC6-217ENST00000469223 LINC01559Q495D7 138 aa8.45□□□□□ -1.06
HDAC6-217ENST00000469223 Q8N814 137 aa8.45□□□□□ -1.06
HDAC6-217ENST00000469223 GAGE12BA1L429 117 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 GAGE7O76087 117 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 GAGE12FP0CL80 117 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 GAGE12GP0CL81 117 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 GAGE12IP0CL82 117 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 HNRNPA3P51991 378 aaKnown RBP8.44□□□□□ -1.06
HDAC6-217ENST00000469223 FOXA3P55318 350 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-217ENST00000469223 TCL1AP56279 114 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 RIGQ13278 110 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 FAM159AQ6UWV7 190 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 VSIG2Q96IQ7 327 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 FAM19A4Q96LR4 140 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 LINC01587Q99440 93 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 LINC00467Q9BRT7 94 aa8.44□□□□□ -1.06
HDAC6-217ENST00000469223 C7orf71A4D174 169 aa8.43□□□□□ -1.06
HDAC6-217ENST00000469223 KLLNB2CW77 178 aa8.43□□□□□ -1.06
HDAC6-217ENST00000469223 PSCAO43653 123 aa8.43□□□□□ -1.06
HDAC6-217ENST00000469223 HLA-DQA1P01909 254 aa8.43□□□□□ -1.06
HDAC6-217ENST00000469223 S100A4P26447 101 aaKnown RBP8.43□□□□□ -1.06
HDAC6-217ENST00000469223 RNASE4P34096 147 aaKnown RBP8.43□□□□□ -1.06
HDAC6-217ENST00000469223 CRIP1P50238 77 aa8.43□□□□□ -1.06
HDAC6-217ENST00000469223 ZFAND2AQ8N6M9 145 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms