RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 J3QQQ9 107 aa10.52□□□□□ -0.72
TGFBR3-204ENST00000465892 LGALS3P17931 250 aaKnown RBP10.52□□□□□ -0.72
TGFBR3-204ENST00000465892 ASIPP42127 132 aa10.52□□□□□ -0.72
TGFBR3-204ENST00000465892 FAM159AQ6UWV7 190 aa10.52□□□□□ -0.72
TGFBR3-204ENST00000465892 VMO1Q7Z5L0 202 aa10.52□□□□□ -0.72
TGFBR3-204ENST00000465892 SRD5A1P18405 259 aa10.52□□□□□ -0.73
TGFBR3-204ENST00000465892 PMVKQ15126 192 aa10.52□□□□□ -0.73
TGFBR3-204ENST00000465892 ZNF256Q9Y2P7 627 aaPredicted RBP10.52□□□□□ -0.73
TGFBR3-204ENST00000465892 TRBV7-9A0A0J9YWB2 115 aa10.51□□□□□ -0.73
TGFBR3-204ENST00000465892 B9A039 149 aa10.51□□□□□ -0.73
TGFBR3-204ENST00000465892 IFITM1P13164 125 aa10.51□□□□□ -0.73
TGFBR3-204ENST00000465892 MUSTN1Q8IVN3 82 aa10.51□□□□□ -0.73
TGFBR3-204ENST00000465892 SPTAN1Q13813 2472 aaKnown RBP10.51□□□□□ -0.73
TGFBR3-204ENST00000465892 FAM74A4Q5TZK3 123 aa10.51□□□□□ -0.73
TGFBR3-204ENST00000465892 IGIPA6NJ69 53 aa10.51□□□□□ -0.73
TGFBR3-204ENST00000465892 IGHV3-33P01772 117 aa10.51□□□□□ -0.73
TGFBR3-204ENST00000465892 CD3EP07766 207 aa10.51□□□□□ -0.73
TGFBR3-204ENST00000465892 ZFAND2AQ8N6M9 145 aa10.51□□□□□ -0.73
TGFBR3-204ENST00000465892 ZFHX2Q9C0A1 2572 aaPredicted RBP10.5□□□□□ -0.73
TGFBR3-204ENST00000465892 NPC2P61916 151 aa10.5□□□□□ -0.73
TGFBR3-204ENST00000465892 Q8N9W7 124 aa10.5□□□□□ -0.73
TGFBR3-204ENST00000465892 C15orf53Q8NAA6 179 aa10.5□□□□□ -0.73
TGFBR3-204ENST00000465892 GRNP28799 593 aaKnown RBP10.5□□□□□ -0.73
TGFBR3-204ENST00000465892 LY6G5BQ8NDX9 201 aa10.5□□□□□ -0.73
TGFBR3-204ENST00000465892 AMELXQ99217 191 aa10.5□□□□□ -0.73
TGFBR3-204ENST00000465892 CEP295Q9C0D2 2601 aa10.5□□□□□ -0.73
TGFBR3-204ENST00000465892 PRR30Q53SZ7 412 aaPredicted RBP10.49□□□□□ -0.73
TGFBR3-204ENST00000465892 SORL1Q92673 2214 aa10.49□□□□□ -0.73
TGFBR3-204ENST00000465892 TRAV21A0A0B4J279 112 aa10.49□□□□□ -0.73
TGFBR3-204ENST00000465892 RNASE3P12724 160 aaKnown RBP10.49□□□□□ -0.73
TGFBR3-204ENST00000465892 IGFL3Q6UXB1 125 aa10.49□□□□□ -0.73
TGFBR3-204ENST00000465892 Q6ZSV7 163 aa10.49□□□□□ -0.73
TGFBR3-204ENST00000465892 ODF3BA8MYP8 253 aa10.48□□□□□ -0.73
TGFBR3-204ENST00000465892 PRSS2P07478 247 aa10.48□□□□□ -0.73
TGFBR3-204ENST00000465892 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
TGFBR3-204ENST00000465892 TMEM263Q8WUH6 116 aaKnown RBP10.48□□□□□ -0.73
TGFBR3-204ENST00000465892 ODF3Q96PU9 254 aa10.48□□□□□ -0.73
TGFBR3-204ENST00000465892 TRAV8-4A0A0B4J246 113 aa10.48□□□□□ -0.73
TGFBR3-204ENST00000465892 CRYBG3Q68DQ2 2970 aa10.48□□□□□ -0.73
TGFBR3-204ENST00000465892 LINC01620Q4KN68 170 aa10.47□□□□□ -0.73
TGFBR3-204ENST00000465892 SDHAF1A6NFY7 115 aa10.47□□□□□ -0.73
TGFBR3-204ENST00000465892 UNQ9165/PRO28630Q6UXU0 137 aa10.47□□□□□ -0.73
TGFBR3-204ENST00000465892 Q8N6K4 173 aa10.47□□□□□ -0.73
TGFBR3-204ENST00000465892 OR10J6PQ8NGY7 276 aa10.47□□□□□ -0.73
TGFBR3-204ENST00000465892 CSMD2Q7Z408 3487 aa10.47□□□□□ -0.73
TGFBR3-204ENST00000465892 SUMO4Q6EEV6 95 aa10.47□□□□□ -0.73
TGFBR3-204ENST00000465892 FAM110DQ8TAY7 271 aaPredicted RBP10.46□□□□□ -0.73
TGFBR3-204ENST00000465892 TRBV12-3P01733 135 aa10.46□□□□□ -0.74
TGFBR3-204ENST00000465892 DUX3Q96PT4 197 aa10.46□□□□□ -0.74
TGFBR3-204ENST00000465892 TRIAP1O43715 76 aa10.45□□□□□ -0.74
TGFBR3-204ENST00000465892 PAPPA-AS1Q5QFB9 102 aa10.45□□□□□ -0.74
TGFBR3-204ENST00000465892 CHCHD5Q9BSY4 110 aa10.45□□□□□ -0.74
TGFBR3-204ENST00000465892 CENPVL3A0A0U1RRI6 287 aa10.45□□□□□ -0.74
TGFBR3-204ENST00000465892 ATXN8Q156A1 80 aa10.45□□□□□ -0.74
TGFBR3-204ENST00000465892 ZNF876PQ49A33 203 aa10.45□□□□□ -0.74
TGFBR3-204ENST00000465892 TMEM219Q86XT9 240 aa10.45□□□□□ -0.74
TGFBR3-204ENST00000465892 LINC00315P59091 139 aa10.44□□□□□ -0.74
TGFBR3-204ENST00000465892 MEIG1Q5JSS6 88 aa10.44□□□□□ -0.74
TGFBR3-204ENST00000465892 EEF1AKMT3Q96AZ1 226 aa10.44□□□□□ -0.74
TGFBR3-204ENST00000465892 ZFP36P26651 326 aaKnown RBP10.44□□□□□ -0.74
TGFBR3-204ENST00000465892 ZNF56Q15929 161 aa10.44□□□□□ -0.74
TGFBR3-204ENST00000465892 CFAP161Q6P656 301 aa10.44□□□□□ -0.74
TGFBR3-204ENST00000465892 SPXQ9BT56 116 aa10.44□□□□□ -0.74
TGFBR3-204ENST00000465892 ZNF292O60281 2723 aa10.44□□□□□ -0.74
TGFBR3-204ENST00000465892 A0A0J9YXV3 536 aa10.44□□□□□ -0.74
TGFBR3-204ENST00000465892 POLR2KP53803 58 aaKnown RBP10.44□□□□□ -0.74
TGFBR3-204ENST00000465892 C2orf82Q6UX34 121 aa10.44□□□□□ -0.74
TGFBR3-204ENST00000465892 CLEC2BQ92478 149 aa10.43□□□□□ -0.74
TGFBR3-204ENST00000465892 LINC00477Q96M19 166 aa10.43□□□□□ -0.74
TGFBR3-204ENST00000465892 H3BMM0 161 aa10.43□□□□□ -0.74
TGFBR3-204ENST00000465892 VCYO14598 125 aa10.43□□□□□ -0.74
TGFBR3-204ENST00000465892 IGHV3-11P01762 117 aa10.43□□□□□ -0.74
TGFBR3-204ENST00000465892 ITLN2Q8WWU7 325 aaPredicted RBP10.43□□□□□ -0.74
TGFBR3-204ENST00000465892 UBE2WQ96B02 151 aa10.43□□□□□ -0.74
TGFBR3-204ENST00000465892 PRRC2AP48634 2157 aaKnown RBP10.43□□□□□ -0.74
TGFBR3-204ENST00000465892 RNASE13Q5GAN3 156 aaKnown RBP10.42□□□□□ -0.74
TGFBR3-204ENST00000465892 MRPL53Q96EL3 112 aaKnown RBP10.42□□□□□ -0.74
TGFBR3-204ENST00000465892 KIF25-AS1Q9Y6Z4 181 aa10.42□□□□□ -0.74
TGFBR3-204ENST00000465892 IGHV1-69DA0A0B4J2H0 117 aa10.42□□□□□ -0.74
TGFBR3-204ENST00000465892 A8MZ25 164 aa10.42□□□□□ -0.74
TGFBR3-204ENST00000465892 IGKV3-20P01619 116 aa10.42□□□□□ -0.74
TGFBR3-204ENST00000465892 FOXC1Q12948 553 aa10.42□□□□□ -0.74
TGFBR3-204ENST00000465892 C9orf139Q6ZV77 190 aa10.42□□□□□ -0.74
TGFBR3-204ENST00000465892 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
TGFBR3-204ENST00000465892 UBE2E1P51965 193 aa10.41□□□□□ -0.74
TGFBR3-204ENST00000465892 ATRXP46100 2492 aa10.41□□□□□ -0.74
TGFBR3-204ENST00000465892 CREBBPQ92793 2442 aa10.41□□□□□ -0.74
TGFBR3-204ENST00000465892 IGHV3OR16-10A0A075B7F0 116 aa10.41□□□□□ -0.74
TGFBR3-204ENST00000465892 TRAV12-3A0A0B4J271 114 aa10.41□□□□□ -0.74
TGFBR3-204ENST00000465892 TMEM223A0PJW6 202 aa10.41□□□□□ -0.74
TGFBR3-204ENST00000465892 M0R1W7 72 aa10.41□□□□□ -0.74
TGFBR3-204ENST00000465892 TMEM141Q96I45 108 aa10.41□□□□□ -0.74
TGFBR3-204ENST00000465892 PPP1R17O96001 155 aa10.4□□□□□ -0.74
TGFBR3-204ENST00000465892 TRBV10-2A0A0K0K1G8 114 aa10.4□□□□□ -0.74
TGFBR3-204ENST00000465892 H7C423 109 aa10.4□□□□□ -0.74
TGFBR3-204ENST00000465892 TIMM17AQ99595 171 aa10.4□□□□□ -0.74
TGFBR3-204ENST00000465892 U3KQE9 123 aa10.4□□□□□ -0.74
TGFBR3-204ENST00000465892 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.4□□□□□ -0.748e-8■■■■□ 21.1
TGFBR3-204ENST00000465892 MUC6Q6W4X9 2439 aa10.4□□□□□ -0.74
TGFBR3-204ENST00000465892 LGALS9O00182 355 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms