RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 C14orf178Q8N769 122 aaPredicted RBP14.69□□□□□ -0.06
LIME1-203ENST00000465591 LYPD6BQ8NI32 183 aa14.69□□□□□ -0.06
LIME1-203ENST00000465591 IGHV3-38A0A0C4DH36 116 aa14.68□□□□□ -0.06
LIME1-203ENST00000465591 NFE4Q86UQ8 179 aa14.68□□□□□ -0.06
LIME1-203ENST00000465591 ATP6V0E2Q8NHE4 81 aa14.68□□□□□ -0.06
LIME1-203ENST00000465591 MLST8Q9BVC4 326 aa14.68□□□□□ -0.06
LIME1-203ENST00000465591 GAGE12JA6NER3 117 aa14.67□□□□□ -0.06
LIME1-203ENST00000465591 K7EP13 123 aa14.67□□□□□ -0.06
LIME1-203ENST00000465591 PDE6DO43924 150 aa14.67□□□□□ -0.06
LIME1-203ENST00000465591 CDK2AP2O75956 126 aa14.67□□□□□ -0.06
LIME1-203ENST00000465591 RPL19P84098 196 aaKnown RBP14.67□□□□□ -0.06
LIME1-203ENST00000465591 GAGE1Q13065 139 aa14.67□□□□□ -0.06
LIME1-203ENST00000465591 GAGE4Q13068 117 aa14.67□□□□□ -0.06
LIME1-203ENST00000465591 GAGE5Q13069 117 aa14.67□□□□□ -0.06
LIME1-203ENST00000465591 GAGE13Q4V321 117 aa14.67□□□□□ -0.06
LIME1-203ENST00000465591 LINC01556Q5JQF7 62 aa14.67□□□□□ -0.06
LIME1-203ENST00000465591 OR10J3Q5JRS4 329 aa14.66□□□□□ -0.06
LIME1-203ENST00000465591 LELP1Q5T871 98 aa14.66□□□□□ -0.06
LIME1-203ENST00000465591 SYT8Q8NBV8 401 aa14.66□□□□□ -0.06
LIME1-203ENST00000465591 GTSF1LQ9H1H1 148 aa14.66□□□□□ -0.06
LIME1-203ENST00000465591 A0A087WTM6 91 aa14.65□□□□□ -0.06
LIME1-203ENST00000465591 A0A087WWL8 130 aa14.65□□□□□ -0.06
LIME1-203ENST00000465591 M0R381 172 aa14.65□□□□□ -0.06
LIME1-203ENST00000465591 ERVFC1-1P60608 527 aa14.65□□□□□ -0.06
LIME1-203ENST00000465591 BAGE2Q86Y30 109 aa14.65□□□□□ -0.06
LIME1-203ENST00000465591 C11orf52Q96A22 123 aa14.65□□□□□ -0.06
LIME1-203ENST00000465591 PHLDA3Q9Y5J5 127 aa14.65□□□□□ -0.06
LIME1-203ENST00000465591 TRAV8-6A0A0B4J262 113 aa14.64□□□□□ -0.07
LIME1-203ENST00000465591 RBFOX3A6NFN3 312 aa14.64□□□□□ -0.07
LIME1-203ENST00000465591 FAM74A4Q5TZK3 123 aa14.64□□□□□ -0.07
LIME1-203ENST00000465591 Q8N3U1 123 aa14.64□□□□□ -0.07
LIME1-203ENST00000465591 C10orf126Q8N4M7 172 aa14.64□□□□□ -0.07
LIME1-203ENST00000465591 SFRP2Q96HF1 295 aa14.64□□□□□ -0.07
LIME1-203ENST00000465591 DERL1Q9BUN8 251 aa14.64□□□□□ -0.07
LIME1-203ENST00000465591 IGHV3-30P01768 117 aa14.63□□□□□ -0.07
LIME1-203ENST00000465591 IGHV3-33P01772 117 aa14.63□□□□□ -0.07
LIME1-203ENST00000465591 IGHV3-30-3P0DP02 117 aa14.63□□□□□ -0.07
LIME1-203ENST00000465591 IGHV3-30-5P0DP03 117 aa14.63□□□□□ -0.07
LIME1-203ENST00000465591 RHODO00212 210 aa14.62□□□□□ -0.07
LIME1-203ENST00000465591 MED9Q9NWA0 146 aa14.62□□□□□ -0.07
LIME1-203ENST00000465591 IBA57-AS1B1ANH7 110 aa14.61□□□□□ -0.07
LIME1-203ENST00000465591 RPL35P42766 123 aaKnown RBP14.61□□□□□ -0.07
LIME1-203ENST00000465591 RAB14P61106 215 aa14.61□□□□□ -0.07
LIME1-203ENST00000465591 PRR27Q6MZM9 219 aa14.61□□□□□ -0.07
LIME1-203ENST00000465591 ZFP82Q8N141 532 aa14.61□□□□□ -0.07
LIME1-203ENST00000465591 EIF5A2Q9GZV4 153 aaKnown RBP14.61□□□□□ -0.07
LIME1-203ENST00000465591 OR10AG1Q8NH19 301 aa14.6□□□□□ -0.07
LIME1-203ENST00000465591 FAM210AQ96ND0 272 aa14.6□□□□□ -0.07
LIME1-203ENST00000465591 EREGO14944 169 aa14.59□□□□□ -0.07
LIME1-203ENST00000465591 TOR2AQ5JU69 321 aa14.59□□□□□ -0.07
LIME1-203ENST00000465591 Q9HAA7 133 aa14.59□□□□□ -0.07
LIME1-203ENST00000465591 PGPEP1Q9NXJ5 209 aa14.59□□□□□ -0.07
LIME1-203ENST00000465591 MUC21A0A0G2JKD1 596 aa14.58□□□□□ -0.08
LIME1-203ENST00000465591 MUC21A0A140T8X8 626 aa14.58□□□□□ -0.08
LIME1-203ENST00000465591 CXCL1P09341 107 aa14.58□□□□□ -0.08
LIME1-203ENST00000465591 MAPKAPK5-AS1Q8N8E1 139 aa14.58□□□□□ -0.08
LIME1-203ENST00000465591 TMEM250H0YL14 139 aa14.57□□□□□ -0.08
LIME1-203ENST00000465591 SNAI2O43623 268 aa14.57□□□□□ -0.08
LIME1-203ENST00000465591 NDUFS6O75380 124 aaKnown RBP14.57□□□□□ -0.08
LIME1-203ENST00000465591 IGLV2-8P01709 118 aa14.57□□□□□ -0.08
LIME1-203ENST00000465591 SSBP4Q9BWG4 385 aaPredicted RBP14.57□□□□□ -0.08
LIME1-203ENST00000465591 LRCOL1A6NCL2 159 aa14.56□□□□□ -0.08
LIME1-203ENST00000465591 GNG4P50150 75 aa14.56□□□□□ -0.08
LIME1-203ENST00000465591 CENPWQ5EE01 88 aa14.56□□□□□ -0.08
LIME1-203ENST00000465591 RAB19A4D1S5 217 aa14.55□□□□□ -0.08
LIME1-203ENST00000465591 SMIM12Q96EX1 92 aa14.55□□□□□ -0.08
LIME1-203ENST00000465591 CDPF1Q6NVV7 123 aa14.54□□□□□ -0.08
LIME1-203ENST00000465591 DAZ4Q86SG3 579 aaKnown RBP14.54□□□□□ -0.08
LIME1-203ENST00000465591 DAZ3Q9NR90 486 aaKnown RBP14.54□□□□□ -0.08
LIME1-203ENST00000465591 OR5AL1P0C617 328 aa14.53□□□□□ -0.08
LIME1-203ENST00000465591 KRTAP10-1P60331 282 aa14.53□□□□□ -0.08
LIME1-203ENST00000465591 SSTP61278 116 aa14.53□□□□□ -0.08
LIME1-203ENST00000465591 BIN3Q9NQY0 253 aa14.53□□□□□ -0.08
LIME1-203ENST00000465591 TRBV20OR9-2A0A075B6H5 130 aa14.52□□□□□ -0.09
LIME1-203ENST00000465591 PSCAO43653 123 aa14.52□□□□□ -0.09
LIME1-203ENST00000465591 GZMBP10144 247 aa14.52□□□□□ -0.09
LIME1-203ENST00000465591 PEA15Q15121 130 aa14.52□□□□□ -0.09
LIME1-203ENST00000465591 SMDT1Q9H4I9 107 aa14.52□□□□□ -0.09
LIME1-203ENST00000465591 A0A087WWC5 75 aa14.51□□□□□ -0.09
LIME1-203ENST00000465591 TRBV10-1A0A0K0K1A3 114 aa14.51□□□□□ -0.09
LIME1-203ENST00000465591 CEBPGP53567 150 aa14.51□□□□□ -0.09
LIME1-203ENST00000465591 UBE2D3P61077 147 aa14.51□□□□□ -0.09
LIME1-203ENST00000465591 UBE2D2P62837 147 aa14.51□□□□□ -0.09
LIME1-203ENST00000465591 IFITM2Q01629 132 aa14.51□□□□□ -0.09
LIME1-203ENST00000465591 LAGE3Q14657 143 aa14.51□□□□□ -0.09
LIME1-203ENST00000465591 Q8N1X5 172 aa14.51□□□□□ -0.09
LIME1-203ENST00000465591 C19orf71A6NCJ1 209 aa14.5□□□□□ -0.09
LIME1-203ENST00000465591 RAB4BP61018 213 aa14.5□□□□□ -0.09
LIME1-203ENST00000465591 ZNF56Q15929 161 aa14.5□□□□□ -0.09
LIME1-203ENST00000465591 CLLU1Q5K131 121 aa14.5□□□□□ -0.09
LIME1-203ENST00000465591 SPANXN1Q5VSR9 72 aa14.5□□□□□ -0.09
LIME1-203ENST00000465591 NIT1Q86X76 327 aa14.5□□□□□ -0.09
LIME1-203ENST00000465591 TRBV7-3A0A075B6L6 115 aa14.49□□□□□ -0.09
LIME1-203ENST00000465591 SRP19P09132 144 aaKnown RBP14.49□□□□□ -0.09
LIME1-203ENST00000465591 RPL36AP83881 106 aaKnown RBP14.49□□□□□ -0.09
LIME1-203ENST00000465591 WFDC2Q14508 124 aa14.49□□□□□ -0.09
LIME1-203ENST00000465591 NEXN-AS1Q8NBZ9 246 aa14.49□□□□□ -0.09
LIME1-203ENST00000465591 OR10G8Q8NGN5 311 aa14.49□□□□□ -0.09
LIME1-203ENST00000465591 RPL36ALQ969Q0 106 aaKnown RBP14.49□□□□□ -0.09
LIME1-203ENST00000465591 DAZAP1Q96EP5 407 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms