RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 HUWE1Q7Z6Z7 4374 aaKnown RBP12.25□□□□□ -0.45
PTPRU-206ENST00000465525 TRGV2A0A075B6R0 118 aa12.25□□□□□ -0.45
PTPRU-206ENST00000465525 LGALS9BQ3B8N2 356 aa12.25□□□□□ -0.45
PTPRU-206ENST00000465525 POM121L12Q8N7R1 296 aa12.25□□□□□ -0.45
PTPRU-206ENST00000465525 PTH2Q96A98 100 aa12.25□□□□□ -0.45
PTPRU-206ENST00000465525 AP1S3Q96PC3 154 aa12.25□□□□□ -0.45
PTPRU-206ENST00000465525 C5orf52A6NGY3 159 aa12.24□□□□□ -0.45
PTPRU-206ENST00000465525 LYRM9A8MSI8 78 aa12.24□□□□□ -0.45
PTPRU-206ENST00000465525 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
PTPRU-206ENST00000465525 TMEM136Q6ZRR5 245 aa12.24□□□□□ -0.45
PTPRU-206ENST00000465525 A0A1B0GW15 77 aa12.23□□□□□ -0.45
PTPRU-206ENST00000465525 MGPP08493 103 aa12.23□□□□□ -0.45
PTPRU-206ENST00000465525 SPART-AS1P0CW21 52 aa12.23□□□□□ -0.45
PTPRU-206ENST00000465525 SNRPEP62304 92 aaKnown RBP12.23□□□□□ -0.45
PTPRU-206ENST00000465525 CFAP126Q5VTH2 177 aa12.23□□□□□ -0.45
PTPRU-206ENST00000465525 AMN1Q8IY45 258 aa12.23□□□□□ -0.45
PTPRU-206ENST00000465525 CRYGDP07320 174 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 SMIM15Q7Z3B0 74 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 ZNF479Q96JC4 524 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 KIF25-AS1Q9Y6Z4 181 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 A8MWV9 139 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 RS1O15537 224 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 TRGC2P03986 189 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 S100A8P05109 93 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 SMIM17P0DL12 118 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 DAD1P61803 113 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 LINC00612Q8N6U2 182 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 OR4C5Q8NGB2 326 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 TMEM191AQ9H0A3 160 aa12.22□□□□□ -0.45
PTPRU-206ENST00000465525 RASL11AQ6T310 242 aa12.21□□□□□ -0.45
PTPRU-206ENST00000465525 FRZBQ92765 325 aa12.21□□□□□ -0.45
PTPRU-206ENST00000465525 DPH3P1Q9H4G8 78 aa12.21□□□□□ -0.45
PTPRU-206ENST00000465525 SLAQ13239 276 aa12.2□□□□□ -0.46
PTPRU-206ENST00000465525 ZNF56Q15929 161 aa12.2□□□□□ -0.46
PTPRU-206ENST00000465525 PIK3CD-AS1Q5SR53 167 aa12.2□□□□□ -0.46
PTPRU-206ENST00000465525 GATD1Q8NB37 220 aa12.2□□□□□ -0.46
PTPRU-206ENST00000465525 RNF185Q96GF1 192 aa12.2□□□□□ -0.46
PTPRU-206ENST00000465525 GNB1LQ9BYB4 327 aa12.2□□□□□ -0.46
PTPRU-206ENST00000465525 MRPL18Q9H0U6 180 aaKnown RBP12.2□□□□□ -0.46
PTPRU-206ENST00000465525 TRAV26-2A0A0B4J265 109 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 TRAV4A0A0B4J268 109 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 F5H697 171 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 AKR1D1P51857 326 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 LINC00315P59091 139 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 NANOS2P60321 138 aaKnown RBP12.19□□□□□ -0.46
PTPRU-206ENST00000465525 C12orf74Q32Q52 190 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 KIAA1644Q3SXP7 199 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 FAM104BQ5XKR9 115 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 Q6ZSN1 163 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 TRAPPC1Q9Y5R8 145 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 TEX48A0A1B0GUV7 120 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 SMKR1H3BMG3 65 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 RAB4AP20338 218 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 FABP9Q0Z7S8 132 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 UFSP1Q6NVU6 142 aa12.19□□□□□ -0.46
PTPRU-206ENST00000465525 HIST1H2BKO60814 126 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 GAS8-AS1O95177 125 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 NCR2O95944 276 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HLA-DQA1P01909 254 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 APCSP02743 223 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HIST1H2BJP06899 126 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HTN3P15516 51 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HIST1H2BOP23527 126 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HIST1H2BBP33778 126 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HIST1H2BDP58876 126 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HIST1H2BCP62807 126 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HIST2H2BEQ16778 126 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 MRPL51Q4U2R6 128 aaKnown RBP12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.18□□□□□ -0.46
PTPRU-206ENST00000465525 C11orf45Q8TAV5 145 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HIST1H2BHQ93079 126 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 NDUFAF3Q9BU61 184 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 EDA2RQ9HAV5 297 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 TGP01266 2768 aa12.18□□□□□ -0.46
PTPRU-206ENST00000465525 STAB2Q8WWQ8 2551 aa12.17□□□□□ -0.46
PTPRU-206ENST00000465525 GATA1P15976 413 aaPredicted RBP12.16□□□□□ -0.46
PTPRU-206ENST00000465525 NDUFA6P56556 154 aa12.16□□□□□ -0.46
PTPRU-206ENST00000465525 COX19Q49B96 90 aa12.16□□□□□ -0.46
PTPRU-206ENST00000465525 SUMO4Q6EEV6 95 aa12.16□□□□□ -0.46
PTPRU-206ENST00000465525 PHOX2AO14813 284 aa12.16□□□□□ -0.46
PTPRU-206ENST00000465525 MT-ND6P03923 174 aa12.16□□□□□ -0.46
PTPRU-206ENST00000465525 HOXA5P20719 270 aa12.16□□□□□ -0.46
PTPRU-206ENST00000465525 Q6ZTC4 211 aa12.16□□□□□ -0.46
PTPRU-206ENST00000465525 TRGV4A0A0C4DH28 118 aa12.15□□□□□ -0.46
PTPRU-206ENST00000465525 RHODO00212 210 aa12.15□□□□□ -0.46
PTPRU-206ENST00000465525 P0DMU3 169 aa12.15□□□□□ -0.46
PTPRU-206ENST00000465525 FAM231AP0DMU4 169 aa12.15□□□□□ -0.46
PTPRU-206ENST00000465525 FAM231CP0DMU5 169 aa12.15□□□□□ -0.46
PTPRU-206ENST00000465525 FHL2Q14192 279 aa12.15□□□□□ -0.46
PTPRU-206ENST00000465525 C18orf15Q96N68 181 aa12.15□□□□□ -0.46
PTPRU-206ENST00000465525 D6R8Y8 96 aa12.14□□□□□ -0.47
PTPRU-206ENST00000465525 ZFP2Q6ZN57 461 aa12.14□□□□□ -0.47
PTPRU-206ENST00000465525 LINC00518Q8N0U6 118 aa12.14□□□□□ -0.47
PTPRU-206ENST00000465525 Q9UF83 564 aa12.14□□□□□ -0.47
PTPRU-206ENST00000465525 ATP5G1P05496 136 aa12.13□□□□□ -0.47
PTPRU-206ENST00000465525 F5H768 121 aa12.13□□□□□ -0.47
PTPRU-206ENST00000465525 CKS2P33552 79 aa12.13□□□□□ -0.47
PTPRU-206ENST00000465525 RPL39LQ96EH5 51 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms