RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, human

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-205	ENST00000463675	GAGE1	Q13065	139 aa		10.39	□□□□□ -0.75
SNU13-205	ENST00000463675	GAGE4	Q13068	117 aa		10.39	□□□□□ -0.75
SNU13-205	ENST00000463675	GAGE5	Q13069	117 aa		10.39	□□□□□ -0.75
SNU13-205	ENST00000463675	GAGE13	Q4V321	117 aa		10.39	□□□□□ -0.75
SNU13-205	ENST00000463675	TTC32	Q5I0X7	151 aa		10.39	□□□□□ -0.75
SNU13-205	ENST00000463675	SMIM12	Q96EX1	92 aa		10.39	□□□□□ -0.75
SNU13-205	ENST00000463675	SFRP2	Q96HF1	295 aa		10.39	□□□□□ -0.75
SNU13-205	ENST00000463675	EIF5A2	Q9GZV4	153 aa	Known RBP	10.39	□□□□□ -0.75
SNU13-205	ENST00000463675	TMEM250	H0YL14	139 aa		10.38	□□□□□ -0.75
SNU13-205	ENST00000463675	CIDEA	O60543	219 aa		10.38	□□□□□ -0.75
SNU13-205	ENST00000463675	SOHLH1	Q5JUK2	328 aa		10.38	□□□□□ -0.75
SNU13-205	ENST00000463675	SPANXN1	Q5VSR9	72 aa		10.38	□□□□□ -0.75
SNU13-205	ENST00000463675	LINC00336	Q6ZUF6	198 aa		10.38	□□□□□ -0.75
SNU13-205	ENST00000463675	C6orf223	Q8N319	242 aa		10.38	□□□□□ -0.75
SNU13-205	ENST00000463675	FAM210A	Q96ND0	272 aa		10.38	□□□□□ -0.75
SNU13-205	ENST00000463675	PKD1	P98161	4303 aa		10.38	□□□□□ -0.75
SNU13-205	ENST00000463675	CRYGD	P07320	174 aa		10.37	□□□□□ -0.75
SNU13-205	ENST00000463675	OR5AL1	P0C617	328 aa		10.37	□□□□□ -0.75
SNU13-205	ENST00000463675	TEX261	Q6UWH6	196 aa		10.37	□□□□□ -0.75
SNU13-205	ENST00000463675	FER1L6-AS1	Q8NA97	138 aa		10.37	□□□□□ -0.75
SNU13-205	ENST00000463675	RNASE7	Q9H1E1	156 aa	Known RBP	10.37	□□□□□ -0.75
SNU13-205	ENST00000463675	IGLC6	P0CF74	106 aa		10.36	□□□□□ -0.75
SNU13-205	ENST00000463675	LINC00694	P0DN24	101 aa		10.36	□□□□□ -0.75
SNU13-205	ENST00000463675	ZNF56	Q15929	161 aa		10.36	□□□□□ -0.75
SNU13-205	ENST00000463675	OCC1	Q8TAD7	63 aa		10.36	□□□□□ -0.75
SNU13-205	ENST00000463675	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.36	□□□□□ -0.75
SNU13-205	ENST00000463675	LINC00315	P59091	139 aa		10.35	□□□□□ -0.75
SNU13-205	ENST00000463675	RPS20	P60866	119 aa	Known RBP	10.35	□□□□□ -0.75
SNU13-205	ENST00000463675	SH2D6	Q7Z4S9	175 aa		10.35	□□□□□ -0.75
SNU13-205	ENST00000463675	NUDT10	Q8NFP7	164 aa		10.35	□□□□□ -0.75
SNU13-205	ENST00000463675	ATP6V0E2	Q8NHE4	81 aa		10.35	□□□□□ -0.75
SNU13-205	ENST00000463675	NUDT11	Q96G61	164 aa		10.35	□□□□□ -0.75
SNU13-205	ENST00000463675	SMIM7	Q9BQ49	75 aa		10.35	□□□□□ -0.75
SNU13-205	ENST00000463675	RPP21	Q9H633	154 aa	Known RBP	10.35	□□□□□ -0.75
SNU13-205	ENST00000463675	BIN3	Q9NQY0	253 aa		10.35	□□□□□ -0.75
SNU13-205	ENST00000463675	DNAH11	Q96DT5	4516 aa		10.35	□□□□□ -0.75
SNU13-205	ENST00000463675		A0A1B0GVY2	172 aa		10.34	□□□□□ -0.75
SNU13-205	ENST00000463675	SRP19	P09132	144 aa	Known RBP	10.34	□□□□□ -0.75
SNU13-205	ENST00000463675	TNP2	Q05952	138 aa		10.34	□□□□□ -0.75
SNU13-205	ENST00000463675	OR10J3	Q5JRS4	329 aa		10.34	□□□□□ -0.75
SNU13-205	ENST00000463675	AP1S3	Q96PC3	154 aa		10.34	□□□□□ -0.75
SNU13-205	ENST00000463675	LY96	Q9Y6Y9	160 aa		10.34	□□□□□ -0.75
SNU13-205	ENST00000463675	DYNC1H1	Q14204	4646 aa	Known RBP	10.34	□□□□□ -0.75
SNU13-205	ENST00000463675		A0A1W2PPQ1	181 aa		10.33	□□□□□ -0.76
SNU13-205	ENST00000463675	XKRY2	A2RUG3	117 aa		10.33	□□□□□ -0.76
SNU13-205	ENST00000463675	MSRB1	Q9NZV6	116 aa		10.33	□□□□□ -0.76
SNU13-205	ENST00000463675	MGP	P08493	103 aa		10.32	□□□□□ -0.76
SNU13-205	ENST00000463675	TIRAP	P58753	221 aa		10.32	□□□□□ -0.76
SNU13-205	ENST00000463675	LYZL1	Q6UWQ5	148 aa		10.32	□□□□□ -0.76
SNU13-205	ENST00000463675		Q8N3U1	123 aa		10.32	□□□□□ -0.76
SNU13-205	ENST00000463675	GTSF1L	Q9H1H1	148 aa		10.32	□□□□□ -0.76
SNU13-205	ENST00000463675	TNFRSF18	Q9Y5U5	241 aa		10.32	□□□□□ -0.76
SNU13-205	ENST00000463675	ZNF727	A8MUV8	499 aa		10.31	□□□□□ -0.76
SNU13-205	ENST00000463675		C9JQL5	133 aa		10.31	□□□□□ -0.76
SNU13-205	ENST00000463675		F5H697	171 aa		10.31	□□□□□ -0.76
SNU13-205	ENST00000463675	DNAH10OS	P0CZ25	163 aa		10.31	□□□□□ -0.76
SNU13-205	ENST00000463675	SMIM17	P0DL12	118 aa		10.31	□□□□□ -0.76
SNU13-205	ENST00000463675	CTRL	P40313	264 aa		10.31	□□□□□ -0.76
SNU13-205	ENST00000463675	SRSF3	P84103	164 aa	Known RBP	10.31	□□□□□ -0.76
SNU13-205	ENST00000463675	LELP1	Q5T871	98 aa		10.31	□□□□□ -0.76
SNU13-205	ENST00000463675	TRAV8-6	A0A0B4J262	113 aa		10.3	□□□□□ -0.76
SNU13-205	ENST00000463675	IGHV3-30	P01768	117 aa		10.3	□□□□□ -0.76
SNU13-205	ENST00000463675	IGHV3-33	P01772	117 aa		10.3	□□□□□ -0.76
SNU13-205	ENST00000463675	IGHV3-30-3	P0DP02	117 aa		10.3	□□□□□ -0.76
SNU13-205	ENST00000463675	IGHV3-30-5	P0DP03	117 aa		10.3	□□□□□ -0.76
SNU13-205	ENST00000463675	EVI2A	P22794	236 aa		10.3	□□□□□ -0.76
SNU13-205	ENST00000463675	RAB4B	P61018	213 aa		10.3	□□□□□ -0.76
SNU13-205	ENST00000463675	CACNG7	P62955	275 aa		10.3	□□□□□ -0.76
SNU13-205	ENST00000463675	LINC01551	Q86U37	167 aa		10.3	□□□□□ -0.76
SNU13-205	ENST00000463675	IGHV3-38	A0A0C4DH36	116 aa		10.29	□□□□□ -0.76
SNU13-205	ENST00000463675	GATC	O43716	136 aa	Known RBP	10.29	□□□□□ -0.76
SNU13-205	ENST00000463675	ERVFC1-1	P60608	527 aa		10.29	□□□□□ -0.76
SNU13-205	ENST00000463675	RPL36A	P83881	106 aa	Known RBP	10.29	□□□□□ -0.76
SNU13-205	ENST00000463675	NEXN-AS1	Q8NBZ9	246 aa		10.29	□□□□□ -0.76
SNU13-205	ENST00000463675	GTSF1	Q8WW33	167 aa		10.29	□□□□□ -0.76
SNU13-205	ENST00000463675	RPL36AL	Q969Q0	106 aa	Known RBP	10.29	□□□□□ -0.76
SNU13-205	ENST00000463675	KIF25-AS1	Q9Y6Z4	181 aa		10.29	□□□□□ -0.76
SNU13-205	ENST00000463675	TRBV10-1	A0A0K0K1A3	114 aa		10.28	□□□□□ -0.76
SNU13-205	ENST00000463675		F2Z2F3	143 aa		10.28	□□□□□ -0.76
SNU13-205	ENST00000463675	UBE2D3	P61077	147 aa		10.27	□□□□□ -0.77
SNU13-205	ENST00000463675	UBE2D2	P62837	147 aa		10.27	□□□□□ -0.77
SNU13-205	ENST00000463675	LINC01556	Q5JQF7	62 aa		10.27	□□□□□ -0.77
SNU13-205	ENST00000463675	SUMO4	Q6EEV6	95 aa		10.27	□□□□□ -0.77
SNU13-205	ENST00000463675		Q6ZRN7	208 aa	Predicted RBP	10.27	□□□□□ -0.77
SNU13-205	ENST00000463675	FAM231D	Q6ZW35	169 aa		10.27	□□□□□ -0.77
SNU13-205	ENST00000463675	KIAA1109	Q2LD37	5005 aa		10.26	□□□□□ -0.77
SNU13-205	ENST00000463675	TRBV7-3	A0A075B6L6	115 aa		10.26	□□□□□ -0.77
SNU13-205	ENST00000463675	TRAV9-2	A0A087WT02	112 aa		10.26	□□□□□ -0.77
SNU13-205	ENST00000463675	NDUFS6	O75380	124 aa	Known RBP	10.26	□□□□□ -0.77
SNU13-205	ENST00000463675	TRGC1	P0CF51	173 aa		10.26	□□□□□ -0.77
SNU13-205	ENST00000463675	NTF3	P20783	257 aa		10.26	□□□□□ -0.77
SNU13-205	ENST00000463675	TWIST1	Q15672	202 aa		10.26	□□□□□ -0.77
SNU13-205	ENST00000463675	ADIRF	Q15847	76 aa		10.26	□□□□□ -0.77
SNU13-205	ENST00000463675	PGLYRP4	Q96LB8	373 aa		10.26	□□□□□ -0.77
SNU13-205	ENST00000463675		Q9HAA7	133 aa		10.26	□□□□□ -0.77
SNU13-205	ENST00000463675	PEA15	Q15121	130 aa		10.25	□□□□□ -0.77
SNU13-205	ENST00000463675	OR10G8	Q8NGN5	311 aa		10.25	□□□□□ -0.77
SNU13-205	ENST00000463675	C10orf126	Q8N4M7	172 aa		10.24	□□□□□ -0.77
SNU13-205	ENST00000463675	ISOC2	Q96AB3	205 aa		10.24	□□□□□ -0.77
SNU13-205	ENST00000463675	CNFN	Q9BYD5	112 aa		10.24	□□□□□ -0.77

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