RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 C2CD3Q4AC94 2353 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 C7orf71A4D174 169 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 SMKR1H3BMG3 65 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 S100A4P26447 101 aaKnown RBP10.76□□□□□ -0.69
HDAC6-213ENST00000462730 IFI27P40305 119 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-213ENST00000462730 DEFB114Q30KQ6 69 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 NSUN5P1Q3KNT7 163 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 SPANXN1Q5VSR9 72 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 RNF185Q96GF1 192 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 A0A096LNJ9 63 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 TRAV12-3A0A0B4J271 114 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 H3BRM9 83 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 SCGB1A1P11684 91 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 CKS2P33552 79 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 DEFB131AP59861 70 aa10.76□□□□□ -0.69
HDAC6-213ENST00000462730 KNCNA6PVL3 124 aa10.75□□□□□ -0.69
HDAC6-213ENST00000462730 GNRH2O43555 120 aa10.75□□□□□ -0.69
HDAC6-213ENST00000462730 CD300EQ496F6 205 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-213ENST00000462730 C2orf91Q6ZV80 131 aa10.75□□□□□ -0.69
HDAC6-213ENST00000462730 AP1S3Q96PC3 154 aa10.75□□□□□ -0.69
HDAC6-213ENST00000462730 IGHV4-4A0A075B6R2 117 aa10.74□□□□□ -0.69
HDAC6-213ENST00000462730 TRAV12-2A0A075B6T6 113 aa10.74□□□□□ -0.69
HDAC6-213ENST00000462730 GAGE12BA1L429 117 aa10.74□□□□□ -0.69
HDAC6-213ENST00000462730 AMMECR1LQ6DCA0 310 aa10.74□□□□□ -0.69
HDAC6-213ENST00000462730 SIGLEC8Q9NYZ4 499 aa10.74□□□□□ -0.69
HDAC6-213ENST00000462730 SPRY2O43597 315 aa10.74□□□□□ -0.69
HDAC6-213ENST00000462730 MED14OSP0DP75 135 aa10.74□□□□□ -0.69
HDAC6-213ENST00000462730 SPINK13Q1W4C9 94 aa10.74□□□□□ -0.69
HDAC6-213ENST00000462730 FAM159AQ6UWV7 190 aa10.74□□□□□ -0.69
HDAC6-213ENST00000462730 OR5A1Q8NGJ0 315 aa10.74□□□□□ -0.69
HDAC6-213ENST00000462730 LOC389332A0A1B0GUA5 103 aa10.73□□□□□ -0.69
HDAC6-213ENST00000462730 SMIM17P0DL12 118 aa10.73□□□□□ -0.69
HDAC6-213ENST00000462730 EVI2AP22794 236 aa10.73□□□□□ -0.69
HDAC6-213ENST00000462730 TMEM97Q5BJF2 176 aa10.73□□□□□ -0.69
HDAC6-213ENST00000462730 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-213ENST00000462730 GAGE10A6NGK3 116 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 M0R381 172 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 NPYP01303 97 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 HSD52Q0P140 79 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 AMTNQ6UX39 209 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 NDUFA11Q86Y39 141 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 MAP6D1Q9H9H5 199 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 PHLDA3Q9Y5J5 127 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 WNK1Q9H4A3 2382 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 C9orf118A6NHY6 69 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 FGF6P10767 208 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 RNASE3P12724 160 aaKnown RBP10.72□□□□□ -0.69
HDAC6-213ENST00000462730 HLA-DRB4P13762 266 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 LGALS9BQ3B8N2 356 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 LGALS9CQ6DKI2 356 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 UFSP1Q6NVU6 142 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 SPAG8Q99932 426 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-213ENST00000462730 HLA-DRB4X5D2U9 266 aa10.72□□□□□ -0.69
HDAC6-213ENST00000462730 AGRNO00468 2067 aa10.71□□□□□ -0.69
HDAC6-213ENST00000462730 FXYD7P58549 80 aa10.71□□□□□ -0.69
HDAC6-213ENST00000462730 TRAV25A0A0B4J276 109 aa10.7□□□□□ -0.7
HDAC6-213ENST00000462730 GAS8-AS1O95177 125 aa10.7□□□□□ -0.7
HDAC6-213ENST00000462730 CD7P09564 240 aa10.7□□□□□ -0.7
HDAC6-213ENST00000462730 SORL1Q92673 2214 aa10.7□□□□□ -0.7
HDAC6-213ENST00000462730 TRAV8-6A0A0B4J262 113 aa10.7□□□□□ -0.7
HDAC6-213ENST00000462730 H3BMM0 161 aa10.7□□□□□ -0.7
HDAC6-213ENST00000462730 K7EP34 96 aa10.7□□□□□ -0.7
HDAC6-213ENST00000462730 HBDP02042 147 aa10.7□□□□□ -0.7
HDAC6-213ENST00000462730 ZNF256Q9Y2P7 627 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-213ENST00000462730 RBMY1BA6NDE4 496 aaKnown RBP10.69□□□□□ -0.7
HDAC6-213ENST00000462730 RBMY1EA6NEQ0 496 aaKnown RBP10.69□□□□□ -0.7
HDAC6-213ENST00000462730 A8MTW9 85 aa10.69□□□□□ -0.7
HDAC6-213ENST00000462730 RBMY1DP0C7P1 496 aaKnown RBP10.69□□□□□ -0.7
HDAC6-213ENST00000462730 GATA1P15976 413 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-213ENST00000462730 MAP1LC3AQ9H492 121 aa10.69□□□□□ -0.7
HDAC6-213ENST00000462730 IGHV1OR15-1A0A075B7D0 117 aa10.68□□□□□ -0.7
HDAC6-213ENST00000462730 TNFRSF6BO95407 300 aa10.68□□□□□ -0.7
HDAC6-213ENST00000462730 TRAV26-2A0A0B4J265 109 aa10.68□□□□□ -0.7
HDAC6-213ENST00000462730 A0A1B0GV72 72 aa10.68□□□□□ -0.7
HDAC6-213ENST00000462730 SAP30O75446 220 aa10.68□□□□□ -0.7
HDAC6-213ENST00000462730 NXPH4O95158 308 aa10.68□□□□□ -0.7
HDAC6-213ENST00000462730 BOD1L2Q8IYS8 172 aa10.68□□□□□ -0.7
HDAC6-213ENST00000462730 IGHV3-16A0A0C4DH30 117 aa10.67□□□□□ -0.7
HDAC6-213ENST00000462730 PF4P02776 101 aa10.67□□□□□ -0.7
HDAC6-213ENST00000462730 IFI27L1Q96BM0 104 aa10.67□□□□□ -0.7
HDAC6-213ENST00000462730 DPH3P1Q9H4G8 78 aa10.67□□□□□ -0.7
HDAC6-213ENST00000462730 NIPBLQ6KC79 2804 aaeCLIP10.67□□□□□ -0.7
HDAC6-213ENST00000462730 G3V4G9 280 aa10.66□□□□□ -0.7
HDAC6-213ENST00000462730 ODF3L2Q3SX64 289 aa10.66□□□□□ -0.7
HDAC6-213ENST00000462730 C14orf178Q8N769 122 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-213ENST00000462730 OR2K2Q8NGT1 345 aa10.66□□□□□ -0.7
HDAC6-213ENST00000462730 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
HDAC6-213ENST00000462730 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
HDAC6-213ENST00000462730 RBMY1FQ15415 496 aaKnown RBP10.66□□□□□ -0.7
HDAC6-213ENST00000462730 Q8N1Y9 231 aa10.66□□□□□ -0.7
HDAC6-213ENST00000462730 MRAP2Q96G30 205 aa10.66□□□□□ -0.7
HDAC6-213ENST00000462730 JMJD1CQ15652 2540 aa10.65□□□□□ -0.7
HDAC6-213ENST00000462730 MGPP08493 103 aa10.65□□□□□ -0.7
HDAC6-213ENST00000462730 NEGR1Q7Z3B1 354 aa10.65□□□□□ -0.7
HDAC6-213ENST00000462730 NRACQ8N912 160 aa10.65□□□□□ -0.7
HDAC6-213ENST00000462730 C9orf85Q96MD7 179 aa10.65□□□□□ -0.7
HDAC6-213ENST00000462730 MDFICQ9P1T7 246 aa10.65□□□□□ -0.7
HDAC6-213ENST00000462730 TCTAP57738 103 aa10.65□□□□□ -0.71
HDAC6-213ENST00000462730 TRGV11A0A075B6L2 103 aa10.64□□□□□ -0.71
HDAC6-213ENST00000462730 LINC00482Q8N8I6 264 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms