RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SMIM9A6NGZ8 99 aa8.81□□□□□ -1
TRAPPC3-205ENST00000462715 SIGLEC15Q6ZMC9 328 aa8.81□□□□□ -1
TRAPPC3-205ENST00000462715 C15orf53Q8NAA6 179 aa8.81□□□□□ -1
TRAPPC3-205ENST00000462715 MXRA5Q9NR99 2828 aa8.81□□□□□ -1
TRAPPC3-205ENST00000462715 FN1P02751 2386 aaKnown RBP8.8□□□□□ -1
TRAPPC3-205ENST00000462715 IGKV1-16P04430 117 aa8.8□□□□□ -1
TRAPPC3-205ENST00000462715 IGHV4-38-2P0DP08 117 aa8.8□□□□□ -1
TRAPPC3-205ENST00000462715 UBE2E1P51965 193 aa8.8□□□□□ -1
TRAPPC3-205ENST00000462715 IGHV1-69DA0A0B4J2H0 117 aa8.8□□□□□ -1
TRAPPC3-205ENST00000462715 CGB1A6NKQ9 187 aa8.8□□□□□ -1
TRAPPC3-205ENST00000462715 J3KT08 172 aa8.8□□□□□ -1
TRAPPC3-205ENST00000462715 IGHV1-69P01742 117 aa8.8□□□□□ -1
TRAPPC3-205ENST00000462715 SRSF9Q13242 221 aaKnown RBP eCLIP8.8□□□□□ -1
TRAPPC3-205ENST00000462715 PAPPA-AS1Q5QFB9 102 aa8.8□□□□□ -1
TRAPPC3-205ENST00000462715 Q8N1Y9 231 aa8.8□□□□□ -1
TRAPPC3-205ENST00000462715 EXOC3-AS1Q8N2X6 119 aa8.8□□□□□ -1
TRAPPC3-205ENST00000462715 MRPL36Q9P0J6 103 aaKnown RBP8.8□□□□□ -1
TRAPPC3-205ENST00000462715 IGHV3OR16-10A0A075B7F0 116 aa8.79□□□□□ -1
TRAPPC3-205ENST00000462715 SMKR1H3BMG3 65 aa8.79□□□□□ -1
TRAPPC3-205ENST00000462715 COX7A1P24310 79 aa8.79□□□□□ -1
TRAPPC3-205ENST00000462715 SHANK2-AS3Q9BTD1 123 aa8.79□□□□□ -1
TRAPPC3-205ENST00000462715 PRO1854Q9UHT4 67 aa8.79□□□□□ -1
TRAPPC3-205ENST00000462715 AGRNO00468 2067 aa8.79□□□□□ -1
TRAPPC3-205ENST00000462715 TRAV2A0A0B4J234 112 aa8.79□□□□□ -1
TRAPPC3-205ENST00000462715 H3BVH4 76 aa8.79□□□□□ -1
TRAPPC3-205ENST00000462715 ANXA2RQ3ZCQ2 193 aa8.79□□□□□ -1
TRAPPC3-205ENST00000462715 C9orf139Q6ZV77 190 aa8.79□□□□□ -1
TRAPPC3-205ENST00000462715 SETD2Q9BYW2 2564 aaPredicted RBP8.78□□□□□ -1
TRAPPC3-205ENST00000462715 NPFFO15130 113 aa8.78□□□□□ -1
TRAPPC3-205ENST00000462715 DLX1P56177 255 aa8.78□□□□□ -1
TRAPPC3-205ENST00000462715 PRB3Q04118 309 aaPredicted RBP8.78□□□□□ -1
TRAPPC3-205ENST00000462715 DEFB121Q5J5C9 76 aa8.78□□□□□ -1
TRAPPC3-205ENST00000462715 BRD3OSQ6XYD6 125 aa8.78□□□□□ -1
TRAPPC3-205ENST00000462715 OR13C6PQ8NH95 151 aa8.78□□□□□ -1
TRAPPC3-205ENST00000462715 H3BRN7 92 aa8.78□□□□□ -1
TRAPPC3-205ENST00000462715 LGALS9O00182 355 aa8.78□□□□□ -1
TRAPPC3-205ENST00000462715 ATXN8Q156A1 80 aa8.78□□□□□ -1
TRAPPC3-205ENST00000462715 ORMDL2Q53FV1 153 aa8.78□□□□□ -1
TRAPPC3-205ENST00000462715 UTF1Q5T230 341 aa8.78□□□□□ -1
TRAPPC3-205ENST00000462715 HCP5Q6MZN7 132 aa8.78□□□□□ -1
TRAPPC3-205ENST00000462715 NF1P21359 2839 aa8.77□□□□□ -1.01
TRAPPC3-205ENST00000462715 ZNF815PA8K554 130 aa8.77□□□□□ -1.01
TRAPPC3-205ENST00000462715 NDUFA3O95167 84 aa8.77□□□□□ -1.01
TRAPPC3-205ENST00000462715 VMA21Q3ZAQ7 101 aa8.77□□□□□ -1.01
TRAPPC3-205ENST00000462715 RUSC1-AS1Q66K80 236 aa8.77□□□□□ -1.01
TRAPPC3-205ENST00000462715 C8orf31Q8N9H6 132 aa8.77□□□□□ -1.01
TRAPPC3-205ENST00000462715 SRSF8Q9BRL6 282 aaKnown RBP8.77□□□□□ -1.01
TRAPPC3-205ENST00000462715 TRBV10-2A0A0K0K1G8 114 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 TIMM23O14925 209 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 SCGB2A1O75556 95 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 SAA4P35542 130 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 SCGB1D4Q6XE38 83 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 NEXN-AS1Q8NBZ9 246 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 BAALCQ8WXS3 180 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 PRR25Q96S07 402 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 PRADC1Q9BSG0 188 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 C21orf62Q9NYP8 219 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 A0A0B4J2C4 111 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 ODF3BA8MYP8 253 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 C9JAW5 83 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 UQCRQO14949 82 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 ACYP1P07311 99 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 C3orf22Q8N5N4 141 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 TMEM101Q96IK0 257 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 ZFHX3Q15911 3703 aa8.76□□□□□ -1.01
TRAPPC3-205ENST00000462715 LINC01548A6NM66 108 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 E7EUB6 86 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 MRPS12O15235 138 aaKnown RBP8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 NDUFA7O95182 113 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 CFC1BP0CG36 223 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 CFC1P0CG37 223 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 PF4V1P10720 104 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 HERVK_113P61574 105 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 MINOS1Q5TGZ0 78 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 TOMM6Q96B49 74 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 C8orf49Q96NF6 230 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 MINOS1-NBL1R4GNA1 71 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 A0A0J9YY99 117 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 H3BMM0 161 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 IGHV3-30P01768 117 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 IGHV3-30-5P0DP03 117 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 TMEM170BQ5T4T1 132 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 LEAP2Q969E1 77 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 UBE2WQ96B02 151 aa8.75□□□□□ -1.01
TRAPPC3-205ENST00000462715 H3BT86 120 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 H3BTX0 84 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 EGR2P11161 476 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 LYZP61626 148 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 Q6ZQT7 251 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 SLC25A29Q8N8R3 303 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 NTN5Q8WTR8 489 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 LINC00526Q96FQ7 95 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 IGLV1-47P01700 117 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 IGLV2-23P01705 113 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 EBI3Q14213 229 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 LINC01620Q4KN68 170 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 TMEM219Q86XT9 240 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 LINC00311Q8N616 119 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 NRACQ8N912 160 aa8.74□□□□□ -1.01
TRAPPC3-205ENST00000462715 TMSB15BA0A087X1C1 80 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms