RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 SETXQ7Z333 2677 aaKnown RBP3.04□□□□□ -1.92
ATP13A3-206ENST00000461660 NSD1Q96L73 2696 aaPredicted RBP3.04□□□□□ -1.92
ATP13A3-206ENST00000461660 ADARB2-AS1A8MUL3 147 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 VCYO14598 125 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 IGHV3-53P01767 116 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 RNASE3P12724 160 aaKnown RBP3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 GATA1P15976 413 aaPredicted RBP3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 AZU1P20160 251 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 LAGE3Q14657 143 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 KRTAP24-1Q3LI83 254 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 Q8N8P6 123 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 FAM19A4Q96LR4 140 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 FAM110AQ9BQ89 295 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 SMIM2Q9BVW6 85 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 MAST4O15021 2626 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 IGHV4-4A0A075B6R2 117 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 GAGE12BA1L429 117 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 TCAPO15273 167 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 GAGE7O76087 117 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 GAGE12FP0CL80 117 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 GAGE12GP0CL81 117 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 GAGE12IP0CL82 117 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 TMEM263Q8WUH6 116 aaKnown RBP3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 IFI27L1Q96BM0 104 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 C16orf74Q96GX8 76 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 SCGB3A1Q96QR1 104 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 CITED1Q99966 193 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 C20orf78Q9BR46 151 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 CYSLTR1Q9Y271 337 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 PAM16Q9Y3D7 125 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 IGHV1-24A0A0C4DH33 117 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 RBMY1BA6NDE4 496 aaKnown RBP3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 RBMY1EA6NEQ0 496 aaKnown RBP3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 NUPR1O60356 82 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 RBMY1DP0C7P1 496 aaKnown RBP3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 C3orf79P0CE67 100 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 DEFB130BP0DP73 79 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 DEFB130AP0DP74 79 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 RPL36AP83881 106 aaKnown RBP3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 BEAN1Q3B7T3 259 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 PYY3Q5JQD4 70 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 GATD1Q8NB37 220 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 RPL36ALQ969Q0 106 aaKnown RBP3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 CLUHP3Q96NS8 147 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 PRO1933Q9H354 126 aa3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 NOP10Q9NPE3 64 aaKnown RBP3.03□□□□□ -1.92
ATP13A3-206ENST00000461660 SDHAF1A6NFY7 115 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 LINC01549A6NIU2 74 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 ESDP10768 282 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 KRTAP10-3P60369 221 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 SMAGPQ0VAQ4 97 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 SUMO4Q6EEV6 95 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 PET117Q6UWS5 81 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 C9orf85Q96MD7 179 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 ZNF747Q9BV97 191 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 JPT2Q9H910 190 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 AGRNO00468 2067 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 HTN3P15516 51 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 COTL1Q14019 142 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 PAPPA-AS1Q5QFB9 102 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 DNLZQ5SXM8 178 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 Q6ZWC4 215 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 ATOH7Q8N100 152 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 RPL39LQ96EH5 51 aaKnown RBP3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 IFITM10A6NMD0 228 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 PKIAP61925 76 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 DEFB135Q30KP9 77 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 RNF185Q96GF1 192 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 PRADC1Q9BSG0 188 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 SCRT2Q9NQ03 307 aa3.02□□□□□ -1.93
ATP13A3-206ENST00000461660 SYS1-DBNDD2H3BUS1 97 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 CRXO43186 299 aaPredicted RBP3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 RIPPLY3P57055 190 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 DEFA6Q01524 100 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 AMMECR1LQ6DCA0 310 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 NEGR1Q7Z3B1 354 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 U3KQK5 164 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 PDZD2O15018 2839 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 KIR2DL5BA0A0G2JN68 375 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 KIR2DL5BA0A0G2JPC4 375 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 K7EMI3 77 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 UBE2L6O14933 153 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 NXPH4O95158 308 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 DAD1P61803 113 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 OXLD1Q5BKU9 147 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 KIR2DL5AQ8N109 375 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 C1orf158Q8N1D5 194 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 OR11H2Q8NH07 326 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 KIR2DL5BQ8NHK3 375 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 DEFB104AQ8WTQ1 72 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 PMCHL2Q9BQD1 86 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 SMIM9A6NGZ8 99 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 A8MTW9 85 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 I3L3M4 83 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 PRM2P04554 102 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 HNRNPA3P51991 378 aaKnown RBP3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 HERVK_113P61574 105 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 SPATA45Q537H7 98 aa3.01□□□□□ -1.93
ATP13A3-206ENST00000461660 DEFB121Q5J5C9 76 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms