RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 KIF25-AS1Q9Y6Z4 181 aa7.45□□□□□ -1.22
HCFC1-204ENST00000461098 TRBV7-3A0A075B6L6 115 aa7.44□□□□□ -1.22
HCFC1-204ENST00000461098 TRBV10-1A0A0K0K1A3 114 aa7.44□□□□□ -1.22
HCFC1-204ENST00000461098 HMGB3O15347 200 aaKnown RBP7.44□□□□□ -1.22
HCFC1-204ENST00000461098 SIX6O95475 246 aa7.44□□□□□ -1.22
HCFC1-204ENST00000461098 S100A4P26447 101 aaKnown RBP7.44□□□□□ -1.22
HCFC1-204ENST00000461098 FLI1Q01543 452 aaPredicted RBP7.44□□□□□ -1.22
HCFC1-204ENST00000461098 DNLZQ5SXM8 178 aa7.44□□□□□ -1.22
HCFC1-204ENST00000461098 PRNTQ86SH4 94 aa7.44□□□□□ -1.22
HCFC1-204ENST00000461098 C5orf17Q8NAS9 161 aa7.44□□□□□ -1.22
HCFC1-204ENST00000461098 SUN5Q8TC36 379 aa7.44□□□□□ -1.22
HCFC1-204ENST00000461098 SFRP2Q96HF1 295 aa7.44□□□□□ -1.22
HCFC1-204ENST00000461098 H3BVH4 76 aa7.43□□□□□ -1.22
HCFC1-204ENST00000461098 ARMS2P0C7Q2 107 aa7.43□□□□□ -1.22
HCFC1-204ENST00000461098 RAB2AP61019 212 aa7.43□□□□□ -1.22
HCFC1-204ENST00000461098 RPL36AP83881 106 aaKnown RBP7.43□□□□□ -1.22
HCFC1-204ENST00000461098 WDR73Q6P4I2 378 aa7.43□□□□□ -1.22
HCFC1-204ENST00000461098 CLRN3Q8NCR9 226 aa7.43□□□□□ -1.22
HCFC1-204ENST00000461098 OR10G8Q8NGN5 311 aa7.43□□□□□ -1.22
HCFC1-204ENST00000461098 RPL36ALQ969Q0 106 aaKnown RBP7.43□□□□□ -1.22
HCFC1-204ENST00000461098 RBM38Q9H0Z9 239 aaKnown RBP7.43□□□□□ -1.22
HCFC1-204ENST00000461098 IGHV3-64A0A075B6Q5 118 aa7.42□□□□□ -1.22
HCFC1-204ENST00000461098 H2AFB2P0C5Z0 115 aa7.42□□□□□ -1.22
HCFC1-204ENST00000461098 ARL14EPLP0DKL9 152 aa7.42□□□□□ -1.22
HCFC1-204ENST00000461098 CRIP1P50238 77 aa7.42□□□□□ -1.22
HCFC1-204ENST00000461098 PRR3P79522 188 aaKnown RBP7.42□□□□□ -1.22
HCFC1-204ENST00000461098 ZFP69Q49AA0 526 aa7.42□□□□□ -1.22
HCFC1-204ENST00000461098 LRRC37A5PQ49AS3 106 aa7.42□□□□□ -1.22
HCFC1-204ENST00000461098 CLPSL2Q6UWE3 100 aa7.42□□□□□ -1.22
HCFC1-204ENST00000461098 NTM-AS1Q6ZSK4 140 aa7.42□□□□□ -1.22
HCFC1-204ENST00000461098 WFDC1Q9HC57 220 aa7.42□□□□□ -1.22
HCFC1-204ENST00000461098 EPDR1Q9UM22 224 aa7.42□□□□□ -1.22
HCFC1-204ENST00000461098 FABP5P3A8MUU1 101 aa7.41□□□□□ -1.22
HCFC1-204ENST00000461098 KRBOX1C9JBD0 128 aa7.41□□□□□ -1.22
HCFC1-204ENST00000461098 SAPCD1Q5SSQ6 148 aa7.41□□□□□ -1.22
HCFC1-204ENST00000461098 LINC00269Q8N2A0 174 aa7.41□□□□□ -1.22
HCFC1-204ENST00000461098 DPH3Q96FX2 82 aa7.41□□□□□ -1.22
HCFC1-204ENST00000461098 HSPB11Q9Y547 144 aa7.41□□□□□ -1.22
HCFC1-204ENST00000461098 TRAV34A0A0B4J273 112 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 A0A1W2PPV4 95 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 hDV102S1A0JD36 115 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 B4DEV8 164 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 K7EQM0 130 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 PTTG1O95997 202 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 STAG3L2P0CL84 134 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 STAG3L3P0CL85 134 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 RBX1P62877 108 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 SUMO1P63165 101 aaKnown RBP7.4□□□□□ -1.22
HCFC1-204ENST00000461098 NEXN-AS1Q8NBZ9 246 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 OR11H4Q8NGC9 324 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 SMIM3Q9BZL3 60 aa7.4□□□□□ -1.22
HCFC1-204ENST00000461098 MUC21A0A0G2JKD1 596 aa7.39□□□□□ -1.23
HCFC1-204ENST00000461098 GRIFINA4D1Z8 144 aa7.39□□□□□ -1.23
HCFC1-204ENST00000461098 CCDC160A6NGH7 325 aa7.39□□□□□ -1.23
HCFC1-204ENST00000461098 SRSF9Q13242 221 aaKnown RBP eCLIP7.39□□□□□ -1.23
HCFC1-204ENST00000461098 PRR27Q6MZM9 219 aa7.39□□□□□ -1.23
HCFC1-204ENST00000461098 SCGB1C1Q8TD33 95 aa7.39□□□□□ -1.23
HCFC1-204ENST00000461098 C7orf33Q8WU49 177 aa7.39□□□□□ -1.23
HCFC1-204ENST00000461098 CHCHD5Q9BSY4 110 aa7.39□□□□□ -1.23
HCFC1-204ENST00000461098 ARL2-SNX15V9GYD0 113 aa7.39□□□□□ -1.23
HCFC1-204ENST00000461098 IGLV10-54A0A075B6I4 117 aa7.38□□□□□ -1.23
HCFC1-204ENST00000461098 M0R381 172 aa7.38□□□□□ -1.23
HCFC1-204ENST00000461098 GCHFRP30047 84 aa7.38□□□□□ -1.23
HCFC1-204ENST00000461098 H2BFSP57053 126 aa7.38□□□□□ -1.23
HCFC1-204ENST00000461098 SPINK6Q6UWN8 80 aa7.38□□□□□ -1.23
HCFC1-204ENST00000461098 M0R036 132 aa7.37□□□□□ -1.23
HCFC1-204ENST00000461098 RPL12P30050 165 aaKnown RBP7.37□□□□□ -1.23
HCFC1-204ENST00000461098 CDC34P49427 236 aaPredicted RBP7.37□□□□□ -1.23
HCFC1-204ENST00000461098 COX8CQ7Z4L0 72 aa7.37□□□□□ -1.23
HCFC1-204ENST00000461098 PPP1R1CQ8WVI7 109 aa7.37□□□□□ -1.23
HCFC1-204ENST00000461098 GTSF1Q8WW33 167 aa7.37□□□□□ -1.23
HCFC1-204ENST00000461098 VAX2Q9UIW0 290 aa7.37□□□□□ -1.23
HCFC1-204ENST00000461098 PHLDA3Q9Y5J5 127 aa7.37□□□□□ -1.23
HCFC1-204ENST00000461098 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.36□□□□□ -1.23
HCFC1-204ENST00000461098 SH2D1AO60880 128 aa7.36□□□□□ -1.23
HCFC1-204ENST00000461098 RAB4BP61018 213 aa7.36□□□□□ -1.23
HCFC1-204ENST00000461098 PKIAP61925 76 aa7.36□□□□□ -1.23
HCFC1-204ENST00000461098 COX6A2Q02221 97 aa7.36□□□□□ -1.23
HCFC1-204ENST00000461098 REG3AQ06141 175 aa7.36□□□□□ -1.23
HCFC1-204ENST00000461098 GAGE6Q13070 117 aa7.36□□□□□ -1.23
HCFC1-204ENST00000461098 Q86TA4 180 aa7.36□□□□□ -1.23
HCFC1-204ENST00000461098 RAB24Q969Q5 203 aa7.36□□□□□ -1.23
HCFC1-204ENST00000461098 KRTAP9-6A0A140TA67 174 aa7.35□□□□□ -1.23
HCFC1-204ENST00000461098 MPC2O95563 127 aa7.35□□□□□ -1.23
HCFC1-204ENST00000461098 TPT1P13693 172 aaKnown RBP7.35□□□□□ -1.23
HCFC1-204ENST00000461098 CYCSP99999 105 aaKnown RBP7.35□□□□□ -1.23
HCFC1-204ENST00000461098 REG3GQ6UW15 175 aa7.35□□□□□ -1.23
HCFC1-204ENST00000461098 ZFP82Q8N141 532 aa7.35□□□□□ -1.23
HCFC1-204ENST00000461098 C20orf203Q8NBC4 194 aa7.35□□□□□ -1.23
HCFC1-204ENST00000461098 PRSS3P2Q8NHM4 247 aa7.35□□□□□ -1.23
HCFC1-204ENST00000461098 GFRA4Q9GZZ7 299 aa7.35□□□□□ -1.23
HCFC1-204ENST00000461098 TRBV6-1A0A0K0K1D8 114 aa7.34□□□□□ -1.23
HCFC1-204ENST00000461098 FAM240BA0A1B0GVZ2 78 aa7.34□□□□□ -1.23
HCFC1-204ENST00000461098 MAJINQ3KP22 176 aa7.34□□□□□ -1.23
HCFC1-204ENST00000461098 LINC01559Q495D7 138 aa7.34□□□□□ -1.23
HCFC1-204ENST00000461098 C15orf56Q8N910 161 aa7.34□□□□□ -1.23
HCFC1-204ENST00000461098 LYPD6BQ8NI32 183 aa7.34□□□□□ -1.23
HCFC1-204ENST00000461098 AP5S1Q9NUS5 200 aa7.34□□□□□ -1.23
HCFC1-204ENST00000461098 IGLV4-60A0A075B6I1 120 aa7.33□□□□□ -1.24
HCFC1-204ENST00000461098 TMSB15BA0A087X1C1 80 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms