RNA–Protein interactions for RNA: ENST00000457416.6

FGFR2-215, Transcript of fibroblast growth factor receptor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR2, Length 3,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-215ENST00000457416 PIFOQ8TCI5 191 aa12.76□□□□□ -0.37
FGFR2-215ENST00000457416 IGSF10Q6WRI0 2623 aa12.76□□□□□ -0.37
FGFR2-215ENST00000457416 OR5A1Q8NGJ0 315 aa12.75□□□□□ -0.37
FGFR2-215ENST00000457416 PIMREGQ9BSJ6 248 aa12.75□□□□□ -0.37
FGFR2-215ENST00000457416 IGHV4-61A0A0C4DH41 118 aa12.75□□□□□ -0.37
FGFR2-215ENST00000457416 RAX2Q96IS3 184 aa12.75□□□□□ -0.37
FGFR2-215ENST00000457416 GATA3P23771 443 aa12.75□□□□□ -0.37
FGFR2-215ENST00000457416 SRSF1Q07955 248 aaKnown RBP eCLIP12.75□□□□□ -0.37
FGFR2-215ENST00000457416 ATP6V0BQ99437 205 aa12.75□□□□□ -0.37
FGFR2-215ENST00000457416 SUMO2P61956 95 aaKnown RBP12.74□□□□□ -0.37
FGFR2-215ENST00000457416 C9orf47Q6ZRZ4 202 aa12.74□□□□□ -0.37
FGFR2-215ENST00000457416 H3BUX3 64 aa12.74□□□□□ -0.37
FGFR2-215ENST00000457416 CD7P09564 240 aa12.74□□□□□ -0.37
FGFR2-215ENST00000457416 OR10J6PQ8NGY7 276 aa12.74□□□□□ -0.37
FGFR2-215ENST00000457416 RASL10AQ92737 203 aa12.74□□□□□ -0.37
FGFR2-215ENST00000457416 SMIM2Q9BVW6 85 aa12.74□□□□□ -0.37
FGFR2-215ENST00000457416 SPANXB1Q9NS25 103 aaPredicted RBP12.74□□□□□ -0.37
FGFR2-215ENST00000457416 C19orf54Q5BKX5 351 aa12.73□□□□□ -0.37
FGFR2-215ENST00000457416 KNCNA6PVL3 124 aa12.73□□□□□ -0.37
FGFR2-215ENST00000457416 CRIP2P52943 208 aaPredicted RBP12.73□□□□□ -0.37
FGFR2-215ENST00000457416 CRYBA4P53673 196 aa12.73□□□□□ -0.37
FGFR2-215ENST00000457416 CCL19Q99731 98 aa12.73□□□□□ -0.37
FGFR2-215ENST00000457416 ZNF580Q9UK33 172 aa12.73□□□□□ -0.37
FGFR2-215ENST00000457416 TP53TG1Q9Y2A0 90 aa12.73□□□□□ -0.37
FGFR2-215ENST00000457416 ATP5LO75964 103 aa12.72□□□□□ -0.37
FGFR2-215ENST00000457416 IGLV2-18A0A075B6J9 118 aa12.72□□□□□ -0.37
FGFR2-215ENST00000457416 A0A087WX48 190 aa12.71□□□□□ -0.37
FGFR2-215ENST00000457416 SCGB1C2P0DMR2 95 aa12.71□□□□□ -0.37
FGFR2-215ENST00000457416 C9orf139Q6ZV77 190 aa12.71□□□□□ -0.37
FGFR2-215ENST00000457416 SYT8Q8NBV8 401 aa12.71□□□□□ -0.37
FGFR2-215ENST00000457416 ASIPP42127 132 aa12.71□□□□□ -0.38
FGFR2-215ENST00000457416 GAGE13Q4V321 117 aa12.71□□□□□ -0.38
FGFR2-215ENST00000457416 ZNF56Q15929 161 aa12.7□□□□□ -0.38
FGFR2-215ENST00000457416 HIVEP2P31629 2446 aa12.7□□□□□ -0.38
FGFR2-215ENST00000457416 A0A1B0GV72 72 aa12.7□□□□□ -0.38
FGFR2-215ENST00000457416 C10orf105Q8TEF2 133 aa12.7□□□□□ -0.38
FGFR2-215ENST00000457416 RHPN1-AS1Q9BWJ2 59 aa12.7□□□□□ -0.38
FGFR2-215ENST00000457416 A0A0U1RRA0 63 aa12.7□□□□□ -0.38
FGFR2-215ENST00000457416 NDUFA4O00483 81 aa12.7□□□□□ -0.38
FGFR2-215ENST00000457416 CEMP1Q6PRD7 247 aaPredicted RBP12.7□□□□□ -0.38
FGFR2-215ENST00000457416 MT-ATP8P03928 68 aa12.69□□□□□ -0.38
FGFR2-215ENST00000457416 BAALCQ8WXS3 180 aa12.69□□□□□ -0.38
FGFR2-215ENST00000457416 C11orf86A6NJI1 115 aa12.69□□□□□ -0.38
FGFR2-215ENST00000457416 F8VRH5 84 aa12.69□□□□□ -0.38
FGFR2-215ENST00000457416 LGALS1P09382 135 aaKnown RBP12.69□□□□□ -0.38
FGFR2-215ENST00000457416 PHLDA1Q8WV24 401 aaPredicted RBP12.69□□□□□ -0.38
FGFR2-215ENST00000457416 LINC01546A6NGU7 62 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 ATP5J2P56134 94 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 PSMG4Q5JS54 123 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 DUX3Q96PT4 197 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 H7C1H1 209 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 NDUFS8O00217 210 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 P0DMU3 169 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 FAM231AP0DMU4 169 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 FAM231CP0DMU5 169 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 SPINK13Q1W4C9 94 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 FOXI2Q6ZQN5 318 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 USMG5Q96IX5 58 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 GEMIN7Q9H840 131 aaKnown RBP12.68□□□□□ -0.38
FGFR2-215ENST00000457416 MYMXA0A1B0GTQ4 84 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 GPHB5Q86YW7 130 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 ZFAND2AQ8N6M9 145 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 LENEPQ9Y5L5 61 aa12.68□□□□□ -0.38
FGFR2-215ENST00000457416 HOXA3O43365 443 aaPredicted RBP12.67□□□□□ -0.38
FGFR2-215ENST00000457416 IGHG2P01859 326 aa12.67□□□□□ -0.38
FGFR2-215ENST00000457416 DOPEY1Q5JWR5 2465 aa12.67□□□□□ -0.38
FGFR2-215ENST00000457416 KIR2DL4Q99706 377 aa12.67□□□□□ -0.38
FGFR2-215ENST00000457416 MDFICQ9P1T7 246 aa12.67□□□□□ -0.38
FGFR2-215ENST00000457416 SS18L2Q9UHA2 77 aa12.66□□□□□ -0.38
FGFR2-215ENST00000457416 IGHV4-30-2A0A087WSY4 118 aa12.66□□□□□ -0.38
FGFR2-215ENST00000457416 Q1RN00 199 aa12.66□□□□□ -0.38
FGFR2-215ENST00000457416 TRAV2A0A0B4J234 112 aa12.65□□□□□ -0.38
FGFR2-215ENST00000457416 A6NDX4 124 aa12.65□□□□□ -0.38
FGFR2-215ENST00000457416 A8MZ25 164 aa12.65□□□□□ -0.38
FGFR2-215ENST00000457416 H3BUA1 57 aa12.65□□□□□ -0.38
FGFR2-215ENST00000457416 SPINK8P0C7L1 97 aa12.65□□□□□ -0.38
FGFR2-215ENST00000457416 FAM159AQ6UWV7 190 aa12.65□□□□□ -0.38
FGFR2-215ENST00000457416 KHDC1LQ5JSQ8 128 aa12.65□□□□□ -0.38
FGFR2-215ENST00000457416 IGHV4-4A0A075B6R2 117 aa12.65□□□□□ -0.38
FGFR2-215ENST00000457416 OVOL1O14753 267 aa12.65□□□□□ -0.38
FGFR2-215ENST00000457416 PRSS2P07478 247 aa12.65□□□□□ -0.38
FGFR2-215ENST00000457416 TSPEAR-AS2P59090 65 aa12.65□□□□□ -0.38
FGFR2-215ENST00000457416 AKAP9Q99996 3911 aa12.65□□□□□ -0.39
FGFR2-215ENST00000457416 J3QR89 54 aa12.64□□□□□ -0.39
FGFR2-215ENST00000457416 SIVA1O15304 175 aa12.64□□□□□ -0.39
FGFR2-215ENST00000457416 MSMBP08118 114 aa12.64□□□□□ -0.39
FGFR2-215ENST00000457416 PROK1P58294 105 aa12.64□□□□□ -0.39
FGFR2-215ENST00000457416 C11orf44Q8N8P7 122 aa12.64□□□□□ -0.39
FGFR2-215ENST00000457416 DPH3P1Q9H4G8 78 aa12.64□□□□□ -0.39
FGFR2-215ENST00000457416 Q9UF83 564 aa12.64□□□□□ -0.39
FGFR2-215ENST00000457416 GCN1Q92616 2671 aaKnown RBP12.64□□□□□ -0.39
FGFR2-215ENST00000457416 TRAV21A0A0B4J279 112 aa12.64□□□□□ -0.39
FGFR2-215ENST00000457416 FHL3Q13643 280 aa12.64□□□□□ -0.39
FGFR2-215ENST00000457416 RRN3P1Q2M238 152 aa12.64□□□□□ -0.39
FGFR2-215ENST00000457416 ZMAT4Q9H898 229 aa12.64□□□□□ -0.39
FGFR2-215ENST00000457416 DEFB136Q30KP8 78 aa12.63□□□□□ -0.39
FGFR2-215ENST00000457416 NFE4Q86UQ8 179 aa12.63□□□□□ -0.39
FGFR2-215ENST00000457416 E9PLD3 99 aa12.63□□□□□ -0.39
FGFR2-215ENST00000457416 BRI3O95415 125 aa12.63□□□□□ -0.39
FGFR2-215ENST00000457416 RNASE3P12724 160 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms