RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 PATE2Q6UY27 113 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 TCTEX1D1Q8N7M0 179 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 DIRC1Q969H9 104 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 MRPS24Q96EL2 167 aaKnown RBP2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 SCRT1Q9BWW7 348 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 DUSP21Q9H596 190 aa2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 KMT2CQ8NEZ4 4911 aaKnown RBP2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 PRRC2CQ9Y520 2896 aaKnown RBP2.18□□□□□ -2.06
HMGB1P15-201ENST00000453854 ANK2Q01484 3957 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 NUMA1Q14980 2115 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 DIDO1Q9BTC0 2240 aaKnown RBP2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 KNL1Q8NG31 2342 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 ACANP16112 2415 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 FLNAP21333 2647 aaKnown RBP2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 IGKV2-28A0A075B6P5 120 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 TRAV27A0A087WT01 109 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 MDFIC2A0A1B0GVS7 189 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 H7C2G1 150 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 K7ERJ3 54 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 GNRH2O43555 120 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 IGKV2D-28P01615 120 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 MT-ND6P03923 174 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 HLA-DRB4P13762 266 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 MAXP61244 160 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 BTG2P78543 158 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 MOBPQ13875 183 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 HES1Q14469 280 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 ZNF181Q2M3W8 571 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 KPRPQ5T749 579 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 GLIPR1L1Q6UWM5 242 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 SOSTDC1Q6X4U4 206 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 RPS19BP1Q86WX3 136 aaKnown RBP2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 ATOH7Q8N100 152 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 C3orf56Q8N813 242 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 ZC2HC1AQ96GY0 325 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 RERGLQ9H628 205 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 HLA-DRB4X5D2U9 266 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 MALRD1Q5VYJ5 2156 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 COL6A5A8TX70 2615 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 TRPM6Q9BX84 2022 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 BIRC6Q9NR09 4857 aa2.17□□□□□ -2.06
HMGB1P15-201ENST00000453854 PRR14LQ5THK1 2151 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 COL1A2P08123 1366 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 SYNGR2O43760 224 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 YPEL1O60688 119 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 CPSF4O95639 269 aaKnown RBP2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 CLPSP04118 112 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 TCRAP04437 139 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 HIST1H1BP16401 226 aaKnown RBP2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 ZNF22P17026 224 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 GNG4P50150 75 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 FOXA3P55318 350 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 PPP3R1P63098 170 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 MRPS36P82909 103 aaKnown RBP2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 FOXF1Q12946 379 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 DIAPH2-AS1Q14236 149 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 FAM27BQ5VT28 67 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 TMEM91Q6ZNR0 172 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 SLC35E3Q7Z769 313 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 TEN1Q86WV5 123 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 FAM216BQ8N7L0 139 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 OR8B2Q96RD0 313 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 HHLA3Q9XRX5 114 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 MXRA5Q9NR99 2828 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 TLN2Q9Y4G6 2542 aa2.16□□□□□ -2.06
HMGB1P15-201ENST00000453854 TGP01266 2768 aa2.15□□□□□ -2.06
HMGB1P15-201ENST00000453854 PKD1L1Q8TDX9 2849 aa2.15□□□□□ -2.06
HMGB1P15-201ENST00000453854 VPS13CQ709C8 3753 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 IGLV3-9A0A075B6K5 115 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 C11orf86A6NJI1 115 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 COLCA2A8K830 154 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 BBIP1A8MTZ0 92 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 CDC42EP2O14613 210 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 LYRM1O43325 122 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 TIMM17BO60830 172 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 HBDP02042 147 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 SLC25A5P05141 298 aaKnown RBP2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 TRGC1P0CF51 173 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 ZNF705BP0CI00 300 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 SAA1P0DJI8 122 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 TPT1P13693 172 aaKnown RBP2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 SCIMPQ6UWF3 145 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 LCN15Q6UWW0 184 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 LYPD6Q86Y78 171 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 RNF182Q8N6D2 247 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 OR5D14Q8NGL3 314 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 PP6455Q8WZ26 134 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 AQP3Q92482 292 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 OR4C12Q96R67 309 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 SNRNP25Q9BV90 132 aaKnown RBP2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 HIGD2AQ9BW72 106 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 SPANXDQ9BXN6 97 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 BCL2L10Q9HD36 194 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 CYTL1Q9NRR1 136 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 MPC1Q9Y5U8 109 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 NOTCH1P46531 2555 aa2.15□□□□□ -2.07
HMGB1P15-201ENST00000453854 PKDREJQ9NTG1 2253 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms