RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 MBP02144 154 aa9.22□□□□□ -0.93
LYSMD3-202ENST00000453259 MT1HL1P0DM35 61 aa9.22□□□□□ -0.93
LYSMD3-202ENST00000453259 RPL19P84098 196 aaKnown RBP9.22□□□□□ -0.93
LYSMD3-202ENST00000453259 DNAJC30Q96LL9 226 aa9.22□□□□□ -0.93
LYSMD3-202ENST00000453259 SMIM3Q9BZL3 60 aa9.22□□□□□ -0.93
LYSMD3-202ENST00000453259 Q9UF83 564 aa9.22□□□□□ -0.93
LYSMD3-202ENST00000453259 TRBV7-3A0A075B6L6 115 aa9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 A0A1W2PRE2 83 aa9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 EIF3GO75821 320 aaKnown RBP eCLIP9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 GCHFRP30047 84 aa9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 HNRNPA3P51991 378 aaKnown RBP9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 UBE2D3P61077 147 aa9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 UBE2D2P62837 147 aa9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 SUMO1P63165 101 aaKnown RBP9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 OR10G8Q8NGN5 311 aa9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 ZC2HC1AQ96GY0 325 aa9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 SFRP2Q96HF1 295 aa9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 PSMG3Q9BT73 122 aaPredicted RBP9.21□□□□□ -0.94
LYSMD3-202ENST00000453259 TRBV6-8A0A0A6YYG3 113 aa9.2□□□□□ -0.94
LYSMD3-202ENST00000453259 B4DEV8 164 aa9.2□□□□□ -0.94
LYSMD3-202ENST00000453259 USP17L23D6RBM5 183 aa9.2□□□□□ -0.94
LYSMD3-202ENST00000453259 HMGB3O15347 200 aaKnown RBP9.2□□□□□ -0.94
LYSMD3-202ENST00000453259 CXorf1O96002 111 aa9.2□□□□□ -0.94
LYSMD3-202ENST00000453259 FAM74A4Q5TZK3 123 aa9.2□□□□□ -0.94
LYSMD3-202ENST00000453259 ENHOQ6UWT2 76 aa9.2□□□□□ -0.94
LYSMD3-202ENST00000453259 RAB24Q969Q5 203 aa9.2□□□□□ -0.94
LYSMD3-202ENST00000453259 JPT2Q9H910 190 aa9.2□□□□□ -0.94
LYSMD3-202ENST00000453259 NDUFA13Q9P0J0 144 aa9.2□□□□□ -0.94
LYSMD3-202ENST00000453259 ARL2-SNX15V9GYD0 113 aa9.2□□□□□ -0.94
LYSMD3-202ENST00000453259 H3BVH4 76 aa9.19□□□□□ -0.94
LYSMD3-202ENST00000453259 SERF2P84101 59 aa9.19□□□□□ -0.94
LYSMD3-202ENST00000453259 TMEM97Q5BJF2 176 aa9.19□□□□□ -0.94
LYSMD3-202ENST00000453259 COX8CQ7Z4L0 72 aa9.19□□□□□ -0.94
LYSMD3-202ENST00000453259 CLRN3Q8NCR9 226 aa9.19□□□□□ -0.94
LYSMD3-202ENST00000453259 RNF185Q96GF1 192 aa9.19□□□□□ -0.94
LYSMD3-202ENST00000453259 NKX6-2Q9C056 277 aaPredicted RBP9.19□□□□□ -0.94
LYSMD3-202ENST00000453259 PHLDA3Q9Y5J5 127 aa9.19□□□□□ -0.94
LYSMD3-202ENST00000453259 KRBOX1C9JBD0 128 aa9.18□□□□□ -0.94
LYSMD3-202ENST00000453259 TMEM262E9PQX1 116 aa9.18□□□□□ -0.94
LYSMD3-202ENST00000453259 ARMS2P0C7Q2 107 aa9.18□□□□□ -0.94
LYSMD3-202ENST00000453259 CIRBPQ14011 172 aaKnown RBP9.18□□□□□ -0.94
LYSMD3-202ENST00000453259 ZFP82Q8N141 532 aa9.18□□□□□ -0.94
LYSMD3-202ENST00000453259 S100ZQ8WXG8 99 aa9.18□□□□□ -0.94
LYSMD3-202ENST00000453259 WFDC1Q9HC57 220 aa9.18□□□□□ -0.94
LYSMD3-202ENST00000453259 INMT-MINDY4F8WBC2 141 aa9.17□□□□□ -0.94
LYSMD3-202ENST00000453259 HLA-DQA1P01909 254 aa9.17□□□□□ -0.94
LYSMD3-202ENST00000453259 ANGP03950 147 aaKnown RBP9.17□□□□□ -0.94
LYSMD3-202ENST00000453259 PRSS1P07477 247 aa9.17□□□□□ -0.94
LYSMD3-202ENST00000453259 TPT1P13693 172 aaKnown RBP9.17□□□□□ -0.94
LYSMD3-202ENST00000453259 C15orf54Q8N8G6 183 aa9.17□□□□□ -0.94
LYSMD3-202ENST00000453259 HIST1H2BAQ96A08 127 aa9.17□□□□□ -0.94
LYSMD3-202ENST00000453259 PRR34Q9NV39 138 aa9.17□□□□□ -0.94
LYSMD3-202ENST00000453259 ZFP30Q9Y2G7 519 aa9.17□□□□□ -0.94
LYSMD3-202ENST00000453259 SSNA1O43805 119 aa9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 RAB4BP61018 213 aa9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 MPV17L2Q567V2 206 aa9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 FAM162BQ5T6X4 162 aa9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 SDIM1Q6ZPB5 146 aa9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 Q86TA4 180 aa9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 MARVELD1Q9BSK0 173 aa9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 ACTR3CQ9C0K3 210 aaPredicted RBP9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 TNFSF18Q9UNG2 199 aa9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.16□□□□□ -0.94
LYSMD3-202ENST00000453259 A0A087WWL8 130 aa9.15□□□□□ -0.94
LYSMD3-202ENST00000453259 IFNA7P01567 189 aa9.15□□□□□ -0.94
LYSMD3-202ENST00000453259 TCEAL7Q9BRU2 100 aa9.15□□□□□ -0.94
LYSMD3-202ENST00000453259 M0R381 172 aa9.14□□□□□ -0.95
LYSMD3-202ENST00000453259 PEX7O00628 323 aa9.14□□□□□ -0.95
LYSMD3-202ENST00000453259 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.13□□□□□ -0.95
LYSMD3-202ENST00000453259 UPK1BO75841 260 aa9.13□□□□□ -0.95
LYSMD3-202ENST00000453259 PTTG1O95997 202 aa9.13□□□□□ -0.95
LYSMD3-202ENST00000453259 PRR27Q6MZM9 219 aa9.13□□□□□ -0.95
LYSMD3-202ENST00000453259 FMC1Q96HJ9 113 aa9.13□□□□□ -0.95
LYSMD3-202ENST00000453259 CHCHD5Q9BSY4 110 aa9.13□□□□□ -0.95
LYSMD3-202ENST00000453259 TRAV34A0A0B4J273 112 aa9.12□□□□□ -0.95
LYSMD3-202ENST00000453259 M0R036 132 aa9.12□□□□□ -0.95
LYSMD3-202ENST00000453259 SH2D1AO60880 128 aa9.12□□□□□ -0.95
LYSMD3-202ENST00000453259 ATP6V0CP27449 155 aa9.12□□□□□ -0.95
LYSMD3-202ENST00000453259 CRIP1P50238 77 aa9.12□□□□□ -0.95
LYSMD3-202ENST00000453259 ZNF674Q2M3X9 581 aa9.12□□□□□ -0.95
LYSMD3-202ENST00000453259 DPH3P1Q9H4G8 78 aa9.12□□□□□ -0.95
LYSMD3-202ENST00000453259 VAX2Q9UIW0 290 aa9.12□□□□□ -0.95
LYSMD3-202ENST00000453259 IGHV3-64A0A075B6Q5 118 aa9.11□□□□□ -0.95
LYSMD3-202ENST00000453259 TRAV8-4A0A0B4J246 113 aa9.11□□□□□ -0.95
LYSMD3-202ENST00000453259 TRBV6-1A0A0K0K1D8 114 aa9.11□□□□□ -0.95
LYSMD3-202ENST00000453259 P01737 135 aa9.11□□□□□ -0.95
LYSMD3-202ENST00000453259 CXCL1P09341 107 aa9.11□□□□□ -0.95
LYSMD3-202ENST00000453259 GZMBP10144 247 aa9.11□□□□□ -0.95
LYSMD3-202ENST00000453259 KRTAP26-1Q6PEX3 210 aa9.11□□□□□ -0.95
LYSMD3-202ENST00000453259 NEXN-AS1Q8NBZ9 246 aa9.11□□□□□ -0.95
LYSMD3-202ENST00000453259 AQP10Q96PS8 301 aa9.11□□□□□ -0.95
LYSMD3-202ENST00000453259 GRIFINA4D1Z8 144 aa9.1□□□□□ -0.95
LYSMD3-202ENST00000453259 PANO1I0J062 215 aa9.1□□□□□ -0.95
LYSMD3-202ENST00000453259 UBE2G1P62253 170 aa9.1□□□□□ -0.95
LYSMD3-202ENST00000453259 ZNF56Q15929 161 aa9.1□□□□□ -0.95
LYSMD3-202ENST00000453259 LCE2CQ5TA81 110 aa9.1□□□□□ -0.95
LYSMD3-202ENST00000453259 C7orf33Q8WU49 177 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms