RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	MYMX	A0A1B0GTQ4	84 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058		A6NJY4	79 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058		E9PLD3	99 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058		K7ERJ3	54 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058	VCY	O14598	125 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058	FABP2	P12104	132 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058	RNF151	Q2KHN1	245 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058		Q6YL49	198 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058	MDFIC	Q9P1T7	246 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058	USP24	Q9UPU5	2620 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058	TRBV6-5	A0A0K0K1A5	114 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058	IGIP	A6NJ69	53 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058	TSHB	P01222	138 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058	CRYGD	P07320	174 aa		12.57	□□□□□ -0.4
TOM1-210	ENST00000449058	NHP2	Q9NX24	153 aa	Known RBP	12.57	□□□□□ -0.4
TOM1-210	ENST00000449058	IGKV3-20	P01619	116 aa		12.56	□□□□□ -0.4
TOM1-210	ENST00000449058	RNF152	Q8N8N0	203 aa		12.56	□□□□□ -0.4
TOM1-210	ENST00000449058	UBE2E2	Q96LR5	201 aa		12.56	□□□□□ -0.4
TOM1-210	ENST00000449058	TP53TG1	Q9Y2A0	90 aa		12.56	□□□□□ -0.4
TOM1-210	ENST00000449058	ANKRD17	O75179	2603 aa	Known RBP	12.56	□□□□□ -0.4
TOM1-210	ENST00000449058	TRBV7-3	A0A075B6L6	115 aa		12.56	□□□□□ -0.4
TOM1-210	ENST00000449058	TRBV27	A0A0K0K1C4	114 aa		12.56	□□□□□ -0.4
TOM1-210	ENST00000449058		Q8N1Y9	231 aa		12.56	□□□□□ -0.4
TOM1-210	ENST00000449058	IGHV1OR15-1	A0A075B7D0	117 aa		12.55	□□□□□ -0.4
TOM1-210	ENST00000449058		F5H697	171 aa		12.55	□□□□□ -0.4
TOM1-210	ENST00000449058	HOXD3	P31249	432 aa	Predicted RBP	12.55	□□□□□ -0.4
TOM1-210	ENST00000449058	KIR2DL4	Q99706	377 aa		12.55	□□□□□ -0.4
TOM1-210	ENST00000449058	AGRN	O00468	2067 aa		12.55	□□□□□ -0.4
TOM1-210	ENST00000449058	SDHAF1	A6NFY7	115 aa		12.55	□□□□□ -0.4
TOM1-210	ENST00000449058	TMEM238	C9JI98	176 aa		12.55	□□□□□ -0.4
TOM1-210	ENST00000449058	RIPPLY3	P57055	190 aa		12.55	□□□□□ -0.4
TOM1-210	ENST00000449058	SYT8	Q8NBV8	401 aa		12.55	□□□□□ -0.4
TOM1-210	ENST00000449058	HIST1H4G	Q99525	98 aa		12.55	□□□□□ -0.4
TOM1-210	ENST00000449058	COX6B1	P14854	86 aa		12.54	□□□□□ -0.4
TOM1-210	ENST00000449058	SPINK13	Q1W4C9	94 aa		12.54	□□□□□ -0.4
TOM1-210	ENST00000449058	AMTN	Q6UX39	209 aa		12.54	□□□□□ -0.4
TOM1-210	ENST00000449058	PRADC1	Q9BSG0	188 aa		12.54	□□□□□ -0.4
TOM1-210	ENST00000449058	MYO18B	Q8IUG5	2567 aa		12.54	□□□□□ -0.4
TOM1-210	ENST00000449058	CR1	P17927	2039 aa		12.54	□□□□□ -0.4
TOM1-210	ENST00000449058	FBN2	P35556	2912 aa		12.54	□□□□□ -0.4
TOM1-210	ENST00000449058	IGLV4-69	A0A075B6H9	119 aa		12.54	□□□□□ -0.4
TOM1-210	ENST00000449058	IGHV4-31	P0DP07	118 aa		12.54	□□□□□ -0.4
TOM1-210	ENST00000449058	FOXI2	Q6ZQN5	318 aa		12.54	□□□□□ -0.4
TOM1-210	ENST00000449058	TMEM141	Q96I45	108 aa		12.54	□□□□□ -0.4
TOM1-210	ENST00000449058		K7ERU9	68 aa		12.53	□□□□□ -0.4
TOM1-210	ENST00000449058	MORN3	Q6PF18	240 aa	Predicted RBP	12.53	□□□□□ -0.4
TOM1-210	ENST00000449058	DUX5	Q96PT3	197 aa		12.53	□□□□□ -0.4
TOM1-210	ENST00000449058	TIMM17A	Q99595	171 aa		12.53	□□□□□ -0.4
TOM1-210	ENST00000449058		M0QY20	66 aa		12.52	□□□□□ -0.4
TOM1-210	ENST00000449058	RPL39	P62891	51 aa	Known RBP	12.52	□□□□□ -0.4
TOM1-210	ENST00000449058	PMVK	Q15126	192 aa		12.52	□□□□□ -0.4
TOM1-210	ENST00000449058	C12orf74	Q32Q52	190 aa		12.52	□□□□□ -0.4
TOM1-210	ENST00000449058	FAM74A4	Q5TZK3	123 aa		12.52	□□□□□ -0.4
TOM1-210	ENST00000449058	C11orf86	A6NJI1	115 aa		12.51	□□□□□ -0.41
TOM1-210	ENST00000449058	IGLL5	B9A064	214 aa		12.51	□□□□□ -0.41
TOM1-210	ENST00000449058	PAPPA-AS1	Q5QFB9	102 aa		12.51	□□□□□ -0.41
TOM1-210	ENST00000449058	ZAN	Q9Y493	2812 aa		12.51	□□□□□ -0.41
TOM1-210	ENST00000449058	USP9Y	O00507	2555 aa	Predicted RBP	12.51	□□□□□ -0.41
TOM1-210	ENST00000449058		A0A1B0GWB2	263 aa		12.51	□□□□□ -0.41
TOM1-210	ENST00000449058	HOXA3	O43365	443 aa	Predicted RBP	12.51	□□□□□ -0.41
TOM1-210	ENST00000449058	VPS25	Q9BRG1	176 aa		12.51	□□□□□ -0.41
TOM1-210	ENST00000449058	PRB1	P04280	392 aa		12.5	□□□□□ -0.41
TOM1-210	ENST00000449058	ZNF56	Q15929	161 aa		12.5	□□□□□ -0.41
TOM1-210	ENST00000449058	DEFB104A	Q8WTQ1	72 aa		12.5	□□□□□ -0.41
TOM1-210	ENST00000449058	BEX4	Q9NWD9	120 aa	Predicted RBP	12.5	□□□□□ -0.41
TOM1-210	ENST00000449058	CSMD2	Q7Z408	3487 aa		12.5	□□□□□ -0.41
TOM1-210	ENST00000449058	SAP30	O75446	220 aa		12.5	□□□□□ -0.41
TOM1-210	ENST00000449058	TCTEX1D4	Q5JR98	221 aa		12.5	□□□□□ -0.41
TOM1-210	ENST00000449058	ZNF256	Q9Y2P7	627 aa	Predicted RBP	12.5	□□□□□ -0.41
TOM1-210	ENST00000449058	TRPT1	Q86TN4	253 aa	Known RBP	12.49	□□□□□ -0.41
TOM1-210	ENST00000449058	BBC3	Q96PG8	261 aa	Predicted RBP	12.49	□□□□□ -0.41
TOM1-210	ENST00000449058	ZNF815P	A8K554	130 aa		12.49	□□□□□ -0.41
TOM1-210	ENST00000449058	NSUN5P1	Q3KNT7	163 aa		12.49	□□□□□ -0.41
TOM1-210	ENST00000449058	DOPEY2	Q9Y3R5	2298 aa		12.49	□□□□□ -0.41
TOM1-210	ENST00000449058	TRGV11	A0A075B6L2	103 aa		12.48	□□□□□ -0.41
TOM1-210	ENST00000449058	RHOH	Q15669	191 aa		12.48	□□□□□ -0.41
TOM1-210	ENST00000449058	CD300E	Q496F6	205 aa	Predicted RBP	12.48	□□□□□ -0.41
TOM1-210	ENST00000449058		Q8N2B8	174 aa		12.48	□□□□□ -0.41
TOM1-210	ENST00000449058		A8MTW9	85 aa		12.48	□□□□□ -0.41
TOM1-210	ENST00000449058	ZNF876P	Q49A33	203 aa		12.48	□□□□□ -0.41
TOM1-210	ENST00000449058	PRRC2A	P48634	2157 aa	Known RBP	12.47	□□□□□ -0.41
TOM1-210	ENST00000449058	RBMY1A1	P0DJD3	496 aa	Known RBP	12.47	□□□□□ -0.41
TOM1-210	ENST00000449058	RBMY1C	P0DJD4	496 aa		12.47	□□□□□ -0.41
TOM1-210	ENST00000449058	RBMY1F	Q15415	496 aa	Known RBP	12.47	□□□□□ -0.41
TOM1-210	ENST00000449058	ZNF479	Q96JC4	524 aa		12.47	□□□□□ -0.41
TOM1-210	ENST00000449058	MXRA5	Q9NR99	2828 aa		12.47	□□□□□ -0.41
TOM1-210	ENST00000449058	EMP1	P54849	157 aa		12.47	□□□□□ -0.41
TOM1-210	ENST00000449058	SLURP1	P55000	103 aa		12.47	□□□□□ -0.41
TOM1-210	ENST00000449058	HERVK_113	P61574	105 aa		12.47	□□□□□ -0.41
TOM1-210	ENST00000449058	C18orf65	Q6ZTR6	163 aa		12.47	□□□□□ -0.41
TOM1-210	ENST00000449058	PLEKHB2	Q96CS7	222 aa		12.47	□□□□□ -0.41
TOM1-210	ENST00000449058	POLQ	O75417	2590 aa		12.46	□□□□□ -0.41
TOM1-210	ENST00000449058	KRTAP10-9	P60411	292 aa		12.46	□□□□□ -0.41
TOM1-210	ENST00000449058	ZFYVE26	Q68DK2	2539 aa		12.46	□□□□□ -0.42
TOM1-210	ENST00000449058	KNCN	A6PVL3	124 aa		12.45	□□□□□ -0.42
TOM1-210	ENST00000449058		P0DMU3	169 aa		12.45	□□□□□ -0.42
TOM1-210	ENST00000449058	FAM231A	P0DMU4	169 aa		12.45	□□□□□ -0.42
TOM1-210	ENST00000449058	FAM231C	P0DMU5	169 aa		12.45	□□□□□ -0.42
TOM1-210	ENST00000449058	SCGB2A2	Q13296	93 aa		12.45	□□□□□ -0.42
TOM1-210	ENST00000449058	RRN3P1	Q2M238	152 aa		12.45	□□□□□ -0.42

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