RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 H0Y8G0 127 aa11.53□□□□□ -0.56
SNX13-204ENST00000444712 PIK3CD-AS1Q5SR53 167 aa11.53□□□□□ -0.56
SNX13-204ENST00000444712 ST20Q9HBF5 79 aa11.53□□□□□ -0.56
SNX13-204ENST00000444712 AKAP9Q99996 3911 aa11.53□□□□□ -0.56
SNX13-204ENST00000444712 ATP5LO75964 103 aa11.53□□□□□ -0.56
SNX13-204ENST00000444712 NUTF2P61970 127 aaKnown RBP11.53□□□□□ -0.56
SNX13-204ENST00000444712 ZNF415Q09FC8 603 aa11.53□□□□□ -0.56
SNX13-204ENST00000444712 ZNF124Q15973 351 aa11.53□□□□□ -0.56
SNX13-204ENST00000444712 TMEM158Q8WZ71 300 aa11.53□□□□□ -0.56
SNX13-204ENST00000444712 IGLV1-51P01701 117 aa11.52□□□□□ -0.56
SNX13-204ENST00000444712 IGLC3P0DOY3 106 aa11.52□□□□□ -0.56
SNX13-204ENST00000444712 LINC00315P59091 139 aa11.52□□□□□ -0.56
SNX13-204ENST00000444712 PTH2Q96A98 100 aa11.52□□□□□ -0.56
SNX13-204ENST00000444712 RBMY1A1P0DJD3 496 aaKnown RBP11.52□□□□□ -0.57
SNX13-204ENST00000444712 RBMY1CP0DJD4 496 aa11.52□□□□□ -0.57
SNX13-204ENST00000444712 G0S2P27469 103 aa11.52□□□□□ -0.57
SNX13-204ENST00000444712 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
SNX13-204ENST00000444712 BAHCC1Q9P281 2608 aa11.51□□□□□ -0.57
SNX13-204ENST00000444712 LINC01549A6NIU2 74 aa11.51□□□□□ -0.57
SNX13-204ENST00000444712 IGLL1P15814 213 aa11.51□□□□□ -0.57
SNX13-204ENST00000444712 ZNF876PQ49A33 203 aa11.51□□□□□ -0.57
SNX13-204ENST00000444712 SORL1Q92673 2214 aa11.51□□□□□ -0.57
SNX13-204ENST00000444712 F5H697 171 aa11.5□□□□□ -0.57
SNX13-204ENST00000444712 SUMO4Q6EEV6 95 aa11.5□□□□□ -0.57
SNX13-204ENST00000444712 TRPT1Q86TN4 253 aaKnown RBP11.5□□□□□ -0.57
SNX13-204ENST00000444712 RPL39LQ96EH5 51 aaKnown RBP11.5□□□□□ -0.57
SNX13-204ENST00000444712 GOLT1BQ9Y3E0 138 aa11.5□□□□□ -0.57
SNX13-204ENST00000444712 NUDT3O95989 172 aa11.5□□□□□ -0.57
SNX13-204ENST00000444712 PF4P02776 101 aa11.5□□□□□ -0.57
SNX13-204ENST00000444712 LINC01587Q99440 93 aa11.5□□□□□ -0.57
SNX13-204ENST00000444712 A0A087WWL8 130 aa11.49□□□□□ -0.57
SNX13-204ENST00000444712 TCAPO15273 167 aa11.49□□□□□ -0.57
SNX13-204ENST00000444712 CRLF1O75462 422 aa11.49□□□□□ -0.57
SNX13-204ENST00000444712 MAJINQ3KP22 176 aa11.49□□□□□ -0.57
SNX13-204ENST00000444712 SPXQ9BT56 116 aa11.49□□□□□ -0.57
SNX13-204ENST00000444712 JPT2Q9H910 190 aa11.49□□□□□ -0.57
SNX13-204ENST00000444712 ANK3Q12955 4377 aaKnown RBP11.49□□□□□ -0.57
SNX13-204ENST00000444712 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
SNX13-204ENST00000444712 M0R2P5 195 aa11.48□□□□□ -0.57
SNX13-204ENST00000444712 CRYGDP07320 174 aa11.48□□□□□ -0.57
SNX13-204ENST00000444712 ZNF56Q15929 161 aa11.48□□□□□ -0.57
SNX13-204ENST00000444712 FAM74A4Q5TZK3 123 aa11.48□□□□□ -0.57
SNX13-204ENST00000444712 A8MWV9 139 aa11.48□□□□□ -0.57
SNX13-204ENST00000444712 H7C1H1 209 aa11.48□□□□□ -0.57
SNX13-204ENST00000444712 M0R143 59 aa11.48□□□□□ -0.57
SNX13-204ENST00000444712 BEAN1Q3B7T3 259 aa11.48□□□□□ -0.57
SNX13-204ENST00000444712 C18orf15Q96N68 181 aa11.48□□□□□ -0.57
SNX13-204ENST00000444712 CSTL1Q9H114 145 aa11.48□□□□□ -0.57
SNX13-204ENST00000444712 HTN1P15515 57 aa11.47□□□□□ -0.57
SNX13-204ENST00000444712 HNRNPA3P51991 378 aaKnown RBP11.47□□□□□ -0.57
SNX13-204ENST00000444712 Q6ZN92 141 aa11.47□□□□□ -0.57
SNX13-204ENST00000444712 EDA2RQ9HAV5 297 aa11.47□□□□□ -0.57
SNX13-204ENST00000444712 HECTD1Q9ULT8 2610 aa11.47□□□□□ -0.57
SNX13-204ENST00000444712 VCYO14598 125 aa11.47□□□□□ -0.57
SNX13-204ENST00000444712 PRSS1P07477 247 aa11.47□□□□□ -0.57
SNX13-204ENST00000444712 TMEM208Q9BTX3 173 aa11.47□□□□□ -0.57
SNX13-204ENST00000444712 hDV102S1A0JD36 115 aa11.46□□□□□ -0.57
SNX13-204ENST00000444712 POLR2KP53803 58 aaKnown RBP11.46□□□□□ -0.57
SNX13-204ENST00000444712 KRTAP10-3P60369 221 aa11.46□□□□□ -0.57
SNX13-204ENST00000444712 TOMM6Q96B49 74 aa11.46□□□□□ -0.57
SNX13-204ENST00000444712 KIR2DL4Q99706 377 aa11.46□□□□□ -0.57
SNX13-204ENST00000444712 PMCHL2Q9BQD1 86 aa11.46□□□□□ -0.57
SNX13-204ENST00000444712 MCRIP2Q9BUT9 160 aaKnown RBP11.46□□□□□ -0.57
SNX13-204ENST00000444712 WNK1Q9H4A3 2382 aa11.46□□□□□ -0.58
SNX13-204ENST00000444712 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.45□□□□□ -0.58
SNX13-204ENST00000444712 MTORP42345 2549 aa11.45□□□□□ -0.58
SNX13-204ENST00000444712 M0QY20 66 aa11.45□□□□□ -0.58
SNX13-204ENST00000444712 LINC00482Q8N8I6 264 aa11.45□□□□□ -0.58
SNX13-204ENST00000444712 C2orf88Q9BSF0 95 aa11.45□□□□□ -0.58
SNX13-204ENST00000444712 XCL2Q9UBD3 114 aa11.45□□□□□ -0.58
SNX13-204ENST00000444712 RHODO00212 210 aa11.44□□□□□ -0.58
SNX13-204ENST00000444712 C11orf72Q8NBR9 251 aa11.44□□□□□ -0.58
SNX13-204ENST00000444712 C1QTNF4Q9BXJ3 329 aa11.44□□□□□ -0.58
SNX13-204ENST00000444712 MRPS16Q9Y3D3 137 aaKnown RBP11.44□□□□□ -0.58
SNX13-204ENST00000444712 TRBV27A0A0K0K1C4 114 aa11.43□□□□□ -0.58
SNX13-204ENST00000444712 SDHAF1A6NFY7 115 aa11.43□□□□□ -0.58
SNX13-204ENST00000444712 INSL3P51460 131 aa11.43□□□□□ -0.58
SNX13-204ENST00000444712 MORN3Q6PF18 240 aaPredicted RBP11.43□□□□□ -0.58
SNX13-204ENST00000444712 SLC25A34Q6PIV7 304 aa11.43□□□□□ -0.58
SNX13-204ENST00000444712 ODF1Q14990 250 aa11.43□□□□□ -0.58
SNX13-204ENST00000444712 C2orf66Q6UXQ4 117 aa11.43□□□□□ -0.58
SNX13-204ENST00000444712 SCGB3A1Q96QR1 104 aa11.43□□□□□ -0.58
SNX13-204ENST00000444712 TRAV12-1A0A0B4J245 112 aa11.42□□□□□ -0.58
SNX13-204ENST00000444712 SNHG12Q9BXW3 62 aa11.42□□□□□ -0.58
SNX13-204ENST00000444712 ZMAT4Q9H898 229 aa11.42□□□□□ -0.58
SNX13-204ENST00000444712 CYSLTR1Q9Y271 337 aa11.42□□□□□ -0.58
SNX13-204ENST00000444712 C19orf73Q9NVV2 129 aa11.42□□□□□ -0.58
SNX13-204ENST00000444712 ERASQ7Z444 233 aa11.41□□□□□ -0.58
SNX13-204ENST00000444712 C1orf158Q8N1D5 194 aa11.41□□□□□ -0.58
SNX13-204ENST00000444712 A0A087WX48 190 aa11.4□□□□□ -0.58
SNX13-204ENST00000444712 EREGO14944 169 aa11.4□□□□□ -0.58
SNX13-204ENST00000444712 DPM2O94777 84 aa11.4□□□□□ -0.58
SNX13-204ENST00000444712 IGKCP01834 107 aa11.4□□□□□ -0.58
SNX13-204ENST00000444712 RHOHQ15669 191 aa11.4□□□□□ -0.58
SNX13-204ENST00000444712 C9orf66Q5T8R8 295 aa11.4□□□□□ -0.58
SNX13-204ENST00000444712 ZFP2Q6ZN57 461 aa11.4□□□□□ -0.58
SNX13-204ENST00000444712 DKK2Q9UBU2 259 aa11.4□□□□□ -0.58
SNX13-204ENST00000444712 COX8AP10176 69 aa11.4□□□□□ -0.59
SNX13-204ENST00000444712 RIPPLY3P57055 190 aa11.4□□□□□ -0.59
SNX13-204ENST00000444712 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms