RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 GATA1P15976 413 aaPredicted RBP4.41□□□□□ -1.7
VPS50-205ENST00000441602 DEFA6Q01524 100 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
VPS50-205ENST00000441602 C12orf54Q6X4T0 127 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 Q6ZN92 141 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 SPATA12Q7Z6I5 190 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 TMEM263Q8WUH6 116 aaKnown RBP4.41□□□□□ -1.7
VPS50-205ENST00000441602 TMEM158Q8WZ71 300 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 RASL10AQ92737 203 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 KIF25-AS1Q9Y6Z4 181 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 HECTD1Q9ULT8 2610 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 H0Y8G0 127 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 RHOHQ15669 191 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 LGALS9BQ3B8N2 356 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 SPATA45Q537H7 98 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 LGALS9CQ6DKI2 356 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 C3orf56Q8N813 242 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 DNAJC30Q96LL9 226 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 CYSLTR1Q9Y271 337 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 PAM16Q9Y3D7 125 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 TNFRSF18Q9Y5U5 241 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 CENPEQ02224 2701 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 KIR2DL5BA0A0G2JN68 375 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 KIR2DL5BA0A0G2JPC4 375 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 SPRY2O43597 315 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 DDTP30046 118 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 APOC4P55056 127 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 SHISA2Q6UWI4 295 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 KIR2DL5AQ8N109 375 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.4□□□□□ -1.7
VPS50-205ENST00000441602 SMAGPQ0VAQ4 97 aa4.4□□□□□ -1.7
VPS50-205ENST00000441602 LINC01545Q5VT33 79 aa4.4□□□□□ -1.7
VPS50-205ENST00000441602 ZNF664Q8N3J9 261 aa4.4□□□□□ -1.7
VPS50-205ENST00000441602 OR4C5Q8NGB2 326 aa4.4□□□□□ -1.7
VPS50-205ENST00000441602 SCGB3A1Q96QR1 104 aa4.4□□□□□ -1.7
VPS50-205ENST00000441602 EDA2RQ9HAV5 297 aa4.4□□□□□ -1.7
VPS50-205ENST00000441602 RS1O15537 224 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 CRYGDP07320 174 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 RBMY1A1P0DJD3 496 aaKnown RBP4.4□□□□□ -1.71
VPS50-205ENST00000441602 RBMY1CP0DJD4 496 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 RBMY1FQ15415 496 aaKnown RBP4.4□□□□□ -1.71
VPS50-205ENST00000441602 CDPF1Q6NVV7 123 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 ZFP2Q6ZN57 461 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 C1orf158Q8N1D5 194 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 RPL39LQ96EH5 51 aaKnown RBP4.4□□□□□ -1.71
VPS50-205ENST00000441602 UQCR10Q9UDW1 63 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 IGLV2-18A0A075B6J9 118 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 TRGV1A0A0A0MS02 117 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 SDHAF1A6NFY7 115 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 SMIM9A6NGZ8 99 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 PAPPA-AS1Q5QFB9 102 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 PMCHL2Q9BQD1 86 aa4.4□□□□□ -1.71
VPS50-205ENST00000441602 AZU1P20160 251 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 LINC00315P59091 139 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 WFDC9Q8NEX5 89 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 KIR2DL5BQ8NHK3 375 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 MIEN1Q9BRT3 115 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 JPT2Q9H910 190 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 MRPL16Q9NX20 251 aaKnown RBP4.39□□□□□ -1.71
VPS50-205ENST00000441602 I3L3M4 83 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 M0QY20 66 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 LINC00173Q6ZV60 143 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 Q8N976 141 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 C11orf72Q8NBR9 251 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 TMEM141Q96I45 108 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 C18orf15Q96N68 181 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 C19orf73Q9NVV2 129 aa4.39□□□□□ -1.71
VPS50-205ENST00000441602 TENM4Q6N022 2769 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 TRAV4A0A0B4J268 109 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 POLR2KP53803 58 aaKnown RBP4.38□□□□□ -1.71
VPS50-205ENST00000441602 DAZ2Q13117 558 aaKnown RBP4.38□□□□□ -1.71
VPS50-205ENST00000441602 C2orf66Q6UXQ4 117 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 MRPL52Q86TS9 123 aaKnown RBP4.38□□□□□ -1.71
VPS50-205ENST00000441602 MTORP42345 2549 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 PDZD2O15018 2839 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 DPM2O94777 84 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 GAS8-AS1O95177 125 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 HNRNPA3P51991 378 aaKnown RBP4.38□□□□□ -1.71
VPS50-205ENST00000441602 TOMM6Q96B49 74 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 TEX15Q9BXT5 2789 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 TRGV2A0A075B6R0 118 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 A0A096LNJ9 63 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 TRBV10-1A0A0K0K1A3 114 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 TRBV27A0A0K0K1C4 114 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 IGHV3-53P01767 116 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 RPL36AP83881 106 aaKnown RBP4.38□□□□□ -1.71
VPS50-205ENST00000441602 CFAP126Q5VTH2 177 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 ERASQ7Z444 233 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 ATOH7Q8N100 152 aa4.38□□□□□ -1.71
VPS50-205ENST00000441602 RNASE8Q8TDE3 154 aaKnown RBP4.38□□□□□ -1.71
VPS50-205ENST00000441602 RPL36ALQ969Q0 106 aaKnown RBP4.38□□□□□ -1.71
VPS50-205ENST00000441602 TRAV12-1A0A0B4J245 112 aa4.37□□□□□ -1.71
VPS50-205ENST00000441602 LINC00587B1AMM8 73 aa4.37□□□□□ -1.71
VPS50-205ENST00000441602 RIPPLY3P57055 190 aa4.37□□□□□ -1.71
VPS50-205ENST00000441602 COTL1Q14019 142 aa4.37□□□□□ -1.71
VPS50-205ENST00000441602 PLNP26678 52 aa4.37□□□□□ -1.71
VPS50-205ENST00000441602 SLC25A34Q6PIV7 304 aa4.37□□□□□ -1.71
VPS50-205ENST00000441602 WFDC10AQ9H1F0 79 aa4.37□□□□□ -1.71
VPS50-205ENST00000441602 IGHV3-73A0A0B4J1V6 119 aa4.37□□□□□ -1.71
VPS50-205ENST00000441602 IGKCP01834 107 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms