RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 SPTBN5Q9NRC6 3674 aaKnown RBP4.55□□□□□ -1.68
VRK2-206ENST00000435505 WDR87Q6ZQQ6 2873 aa4.55□□□□□ -1.68
VRK2-206ENST00000435505 TRGV3P03979 118 aa4.55□□□□□ -1.68
VRK2-206ENST00000435505 TMEM258P61165 79 aa4.55□□□□□ -1.68
VRK2-206ENST00000435505 REG3AQ06141 175 aa4.55□□□□□ -1.68
VRK2-206ENST00000435505 DEFB133Q30KQ1 61 aa4.55□□□□□ -1.68
VRK2-206ENST00000435505 PRUNE2Q8WUY3 3088 aa4.55□□□□□ -1.68
VRK2-206ENST00000435505 FRYLO94915 3013 aa4.55□□□□□ -1.68
VRK2-206ENST00000435505 CHD9Q3L8U1 2897 aa4.55□□□□□ -1.68
VRK2-206ENST00000435505 PI4KAP42356 2102 aa4.55□□□□□ -1.68
VRK2-206ENST00000435505 CFAP47Q6ZTR5 3102 aa4.55□□□□□ -1.68
VRK2-206ENST00000435505 IGLV3-12A0A075B6K2 115 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 TRBV19A0A075B6N1 114 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 TRACP01848 142 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 ATP5G1P05496 136 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 DEFB121Q5J5C9 76 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 ZNF575Q86XF7 245 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 NRACQ8N912 160 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 KRTAP3-1Q9BYR8 98 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 PRORYQ9H606 182 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 PKIGQ9Y2B9 76 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 ZNF318Q5VUA4 2279 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 IGHV3OR16-12A0A075B7B8 117 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 IGHV1-45A0A0A0MS14 117 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 ZNF80P51504 273 aaPredicted RBP4.54□□□□□ -1.68
VRK2-206ENST00000435505 Q8TAT8 98 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 SCGB3A1Q96QR1 104 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 TMEM14CQ9P0S9 112 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 F5P12259 2224 aa4.54□□□□□ -1.68
VRK2-206ENST00000435505 IGKV2-40A0A087WW87 121 aaPredicted RBP4.53□□□□□ -1.68
VRK2-206ENST00000435505 A0A0B4J2C4 111 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 H3BT86 120 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 IGKV2D-40P01614 121 aaPredicted RBP4.53□□□□□ -1.68
VRK2-206ENST00000435505 PRSS2P07478 247 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 DLX1P56177 255 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 GUSBP11Q6P575 273 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 RPS19BP1Q86WX3 136 aaKnown RBP4.53□□□□□ -1.68
VRK2-206ENST00000435505 SLC25A29Q8N8R3 303 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 MPLKIPQ8TAP9 179 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 SPANXCQ9NY87 97 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 C11orf86A6NJI1 115 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 PRAC2D3DTV9 90 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 C17orf58Q2M2W7 97 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 HCP5Q6MZN7 132 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 C10orf105Q8TEF2 133 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 AMELXQ99217 191 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 CNFNQ9BYD5 112 aa4.53□□□□□ -1.68
VRK2-206ENST00000435505 DSCAMO60469 2012 aa4.53□□□□□ -1.69
VRK2-206ENST00000435505 IGKV1D-17A0A075B6S4 117 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 IQCF6A8MYZ5 107 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 HIST1H4AP62805 103 aaKnown RBP4.52□□□□□ -1.69
VRK2-206ENST00000435505 CLEC2BQ92478 149 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 TOMM6Q96B49 74 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 C9orf85Q96MD7 179 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 PLXNB1O43157 2135 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 TRAV13-1A0A0B4J241 112 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 LY6G6EA0A0G2JKS1 128 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 DNAJC9-AS1A6NH13 148 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 LY6LH3BQJ8 138 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 APELAP0DMC3 54 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 PFN2P35080 140 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 ERCC8Q13216 396 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 C5orf38Q86SI9 138 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 UPK3BQ9BT76 320 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 SHANK2-AS3Q9BTD1 123 aa4.52□□□□□ -1.69
VRK2-206ENST00000435505 TRIOO75962 3097 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 IGLV4-69A0A075B6H9 119 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 IGKV3D-15A0A087WSY6 115 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 J3QQQ9 107 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 ATOX1O00244 68 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 COX6A1P12074 109 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 LINC00643Q86TS7 51 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 TMEM86BQ8N661 226 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 SMIM2Q9BVW6 85 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 TRBV7-1A0A0A6YYK4 115 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 TRBV30A0A0K0K1B3 111 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 TMEM223A0PJW6 202 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 ICOSQ9Y6W8 199 aa4.51□□□□□ -1.69
VRK2-206ENST00000435505 H3BRN7 92 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 MUSTN1Q8IVN3 82 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 TMEM190Q8WZ59 177 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 SPANXDQ9BXN6 97 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 AGPAT4-IT1Q9H0P7 198 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 RAI1Q7Z5J4 1906 aaPredicted RBP4.5□□□□□ -1.69
VRK2-206ENST00000435505 C10orf142B7Z368 130 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 CGB3P0DN86 165 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 CGB7P0DN87 165 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 IGHV1-2P23083 117 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 CXCL5P42830 114 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 PLGLAQ15195 96 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 C1orf195Q5TG92 126 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 DEFB132Q7Z7B7 95 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 TMEM167AQ8TBQ9 72 aa4.5□□□□□ -1.69
VRK2-206ENST00000435505 PRR14LQ5THK1 2151 aa4.49□□□□□ -1.69
VRK2-206ENST00000435505 FAM236DA0A1B0GTK5 79 aa4.49□□□□□ -1.69
VRK2-206ENST00000435505 PINLYPA6NC86 204 aa4.49□□□□□ -1.69
VRK2-206ENST00000435505 RPL37AP8A6NKH3 93 aa4.49□□□□□ -1.69
VRK2-206ENST00000435505 FAM236CP0DP71 79 aa4.49□□□□□ -1.69
VRK2-206ENST00000435505 ORMDL2Q53FV1 153 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms