RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 HOXD3P31249 432 aaPredicted RBP13.83□□□□□ -0.2
CLK1-205ENST00000434813 IGHV3-16A0A0C4DH30 117 aa13.83□□□□□ -0.2
CLK1-205ENST00000434813 ITPR2Q14571 2701 aa13.83□□□□□ -0.2
CLK1-205ENST00000434813 HOXA3O43365 443 aaPredicted RBP13.82□□□□□ -0.2
CLK1-205ENST00000434813 SUMO4Q6EEV6 95 aa13.82□□□□□ -0.2
CLK1-205ENST00000434813 CHTOPQ9Y3Y2 248 aaKnown RBP13.82□□□□□ -0.2
CLK1-205ENST00000434813 CDKN1BP46527 198 aa13.81□□□□□ -0.2
CLK1-205ENST00000434813 JPT2Q9H910 190 aa13.81□□□□□ -0.2
CLK1-205ENST00000434813 DUSP14O95147 198 aaKnown RBP13.81□□□□□ -0.2
CLK1-205ENST00000434813 BAALCQ8WXS3 180 aa13.81□□□□□ -0.2
CLK1-205ENST00000434813 NOTCH2Q04721 2471 aa13.8□□□□□ -0.2
CLK1-205ENST00000434813 TRAV12-2A0A075B6T6 113 aa13.8□□□□□ -0.2
CLK1-205ENST00000434813 POLR2KP53803 58 aaKnown RBP13.8□□□□□ -0.2
CLK1-205ENST00000434813 PRRC2AP48634 2157 aaKnown RBP13.8□□□□□ -0.2
CLK1-205ENST00000434813 LINC01549A6NIU2 74 aa13.8□□□□□ -0.2
CLK1-205ENST00000434813 IGKV3-20P01619 116 aa13.8□□□□□ -0.2
CLK1-205ENST00000434813 FOXI2Q6ZQN5 318 aa13.8□□□□□ -0.2
CLK1-205ENST00000434813 JMJD8Q96S16 334 aa13.8□□□□□ -0.2
CLK1-205ENST00000434813 IGHV1OR15-1A0A075B7D0 117 aa13.79□□□□□ -0.2
CLK1-205ENST00000434813 A0A087WWL8 130 aa13.79□□□□□ -0.2
CLK1-205ENST00000434813 GCSHP23434 173 aa13.79□□□□□ -0.2
CLK1-205ENST00000434813 NEGR1Q7Z3B1 354 aa13.79□□□□□ -0.2
CLK1-205ENST00000434813 TEX29Q8N6K0 151 aa13.79□□□□□ -0.2
CLK1-205ENST00000434813 SYT8Q8NBV8 401 aa13.79□□□□□ -0.2
CLK1-205ENST00000434813 CYSLTR1Q9Y271 337 aa13.79□□□□□ -0.2
CLK1-205ENST00000434813 TEX15Q9BXT5 2789 aa13.78□□□□□ -0.2
CLK1-205ENST00000434813 FXYD2P54710 66 aa13.78□□□□□ -0.2
CLK1-205ENST00000434813 SPINK13Q1W4C9 94 aa13.78□□□□□ -0.2
CLK1-205ENST00000434813 Q8N1Y9 231 aa13.78□□□□□ -0.2
CLK1-205ENST00000434813 Q8N2B8 174 aa13.78□□□□□ -0.2
CLK1-205ENST00000434813 RNASE8Q8TDE3 154 aaKnown RBP13.78□□□□□ -0.2
CLK1-205ENST00000434813 DUX5Q96PT3 197 aa13.78□□□□□ -0.2
CLK1-205ENST00000434813 MDFICQ9P1T7 246 aa13.78□□□□□ -0.2
CLK1-205ENST00000434813 SETXQ7Z333 2677 aaKnown RBP13.78□□□□□ -0.2
CLK1-205ENST00000434813 TRBV6-5A0A0K0K1A5 114 aa13.78□□□□□ -0.2
CLK1-205ENST00000434813 H3BUT2 72 aa13.78□□□□□ -0.2
CLK1-205ENST00000434813 MAPKAPK5-AS1Q8N8E1 139 aa13.78□□□□□ -0.2
CLK1-205ENST00000434813 VCYO14598 125 aa13.77□□□□□ -0.21
CLK1-205ENST00000434813 AMTNQ6UX39 209 aa13.77□□□□□ -0.21
CLK1-205ENST00000434813 TM2D2Q9BX73 214 aa13.77□□□□□ -0.21
CLK1-205ENST00000434813 PRSS29PA6NIE9 313 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 F5H697 171 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 UFSP1Q6NVU6 142 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 ZFP2Q6ZN57 461 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 KIR2DL4Q99706 377 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 GAGE10A6NGK3 116 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 OR11H12B2RN74 326 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 TAL2Q16559 108 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 TCTEX1D4Q5JR98 221 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 GTF2H5Q6ZYL4 71 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 CEND1Q8N111 149 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 OR11H1Q8NG94 326 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 OR11H2Q8NH07 326 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 TP53TG1Q9Y2A0 90 aa13.76□□□□□ -0.21
CLK1-205ENST00000434813 ZNF469Q96JG9 3925 aaPredicted RBP13.76□□□□□ -0.21
CLK1-205ENST00000434813 ITPR3Q14573 2671 aa13.75□□□□□ -0.21
CLK1-205ENST00000434813 TRBV27A0A0K0K1C4 114 aa13.75□□□□□ -0.21
CLK1-205ENST00000434813 SDHAF1A6NFY7 115 aa13.75□□□□□ -0.21
CLK1-205ENST00000434813 MXRA5Q9NR99 2828 aa13.75□□□□□ -0.21
CLK1-205ENST00000434813 K7EP34 96 aa13.74□□□□□ -0.21
CLK1-205ENST00000434813 SMIM13P0DJ93 91 aa13.74□□□□□ -0.21
CLK1-205ENST00000434813 RIPPLY3P57055 190 aa13.74□□□□□ -0.21
CLK1-205ENST00000434813 RAB37Q96AX2 223 aa13.74□□□□□ -0.21
CLK1-205ENST00000434813 CCDC168Q8NDH2 2452 aa13.74□□□□□ -0.21
CLK1-205ENST00000434813 IGIPA6NJ69 53 aa13.74□□□□□ -0.21
CLK1-205ENST00000434813 CRYGDP07320 174 aa13.74□□□□□ -0.21
CLK1-205ENST00000434813 FAM74A4Q5TZK3 123 aa13.74□□□□□ -0.21
CLK1-205ENST00000434813 TRGV11A0A075B6L2 103 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 E9PLD3 99 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 LINC01619G3V211 115 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 TSHBP01222 138 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 SLURP1P55000 103 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 A0A1W2PPM0 123 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 M0QY20 66 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 ZNF56Q15929 161 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 C18orf65Q6ZTR6 163 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 TIMM17AQ99595 171 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 NAA38Q9BRA0 125 aaKnown RBP13.73□□□□□ -0.21
CLK1-205ENST00000434813 CST9LQ9H4G1 147 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 CBY1Q9Y3M2 126 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 PDZD2O15018 2839 aa13.73□□□□□ -0.21
CLK1-205ENST00000434813 MYMXA0A1B0GTQ4 84 aa13.72□□□□□ -0.21
CLK1-205ENST00000434813 GAGE12BA1L429 117 aa13.72□□□□□ -0.21
CLK1-205ENST00000434813 A8MTW9 85 aa13.72□□□□□ -0.21
CLK1-205ENST00000434813 RBX1P62877 108 aa13.72□□□□□ -0.21
CLK1-205ENST00000434813 DEFB136Q30KP8 78 aa13.72□□□□□ -0.21
CLK1-205ENST00000434813 MORN3Q6PF18 240 aaPredicted RBP13.72□□□□□ -0.21
CLK1-205ENST00000434813 TMEM141Q96I45 108 aa13.72□□□□□ -0.21
CLK1-205ENST00000434813 TRAV2A0A0B4J234 112 aa13.71□□□□□ -0.21
CLK1-205ENST00000434813 PHLDA1Q8WV24 401 aaPredicted RBP13.71□□□□□ -0.21
CLK1-205ENST00000434813 ZNF256Q9Y2P7 627 aaPredicted RBP13.71□□□□□ -0.21
CLK1-205ENST00000434813 TRPT1Q86TN4 253 aaKnown RBP13.71□□□□□ -0.22
CLK1-205ENST00000434813 C4orf3Q8WVX3 66 aa13.71□□□□□ -0.22
CLK1-205ENST00000434813 IGLV4-69A0A075B6H9 119 aa13.7□□□□□ -0.22
CLK1-205ENST00000434813 PAPPA-AS1Q5QFB9 102 aa13.7□□□□□ -0.22
CLK1-205ENST00000434813 PRADC1Q9BSG0 188 aa13.7□□□□□ -0.22
CLK1-205ENST00000434813 AGRNO00468 2067 aa13.7□□□□□ -0.22
CLK1-205ENST00000434813 RBMY1A1P0DJD3 496 aaKnown RBP13.69□□□□□ -0.22
CLK1-205ENST00000434813 RBMY1CP0DJD4 496 aa13.69□□□□□ -0.22
CLK1-205ENST00000434813 RPL39P62891 51 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms