RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 Q6AWC8 147 aa4.41□□□□□ -1.7
PTPRK-211ENST00000429595 ZNF562Q6V9R5 426 aa4.41□□□□□ -1.7
PTPRK-211ENST00000429595 ZNF600Q6ZNG1 722 aa4.41□□□□□ -1.7
PTPRK-211ENST00000429595 BAGE3Q86Y29 109 aa4.41□□□□□ -1.7
PTPRK-211ENST00000429595 C6orf223Q8N319 242 aa4.41□□□□□ -1.7
PTPRK-211ENST00000429595 TTC9CQ8N5M4 171 aa4.41□□□□□ -1.7
PTPRK-211ENST00000429595 NUP35Q8NFH5 326 aa4.41□□□□□ -1.7
PTPRK-211ENST00000429595 OR5T1Q8NG75 326 aa4.41□□□□□ -1.7
PTPRK-211ENST00000429595 CHCHD1Q96BP2 118 aaKnown RBP4.41□□□□□ -1.7
PTPRK-211ENST00000429595 C17orf77Q96MU5 243 aa4.41□□□□□ -1.7
PTPRK-211ENST00000429595 ZNF586Q9NXT0 402 aa4.41□□□□□ -1.7
PTPRK-211ENST00000429595 HIGD1AQ9Y241 93 aa4.41□□□□□ -1.7
PTPRK-211ENST00000429595 DNAH2Q9P225 4427 aa4.4□□□□□ -1.7
PTPRK-211ENST00000429595 FLG2Q5D862 2391 aaPredicted RBP4.4□□□□□ -1.7
PTPRK-211ENST00000429595 DEFB131BA0A096LNP1 70 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 TRAV5A0A0B4J249 113 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 PGPA6NDG6 321 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 K7EQM0 130 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 ZNF324O75467 553 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-211ENST00000429595 SCGB2A1O75556 95 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 SERF1AO75920 110 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 SCGB1D1O95968 90 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 GATA2P23769 480 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-211ENST00000429595 UBE2G1P62253 170 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 PSMG4Q5JS54 123 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 SAPCD1Q5SSQ6 148 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 RBPMS2Q6ZRY4 209 aaKnown RBP4.4□□□□□ -1.71
PTPRK-211ENST00000429595 BPIFA4PQ86YQ2 179 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 TMEM75Q8N9X5 138 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 SRSF12Q8WXF0 261 aaKnown RBP4.4□□□□□ -1.71
PTPRK-211ENST00000429595 KCNS1Q96KK3 526 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 ALKBH7Q9BT30 221 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-211ENST00000429595 SHANK2-AS3Q9BTD1 123 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 RNASE7Q9H1E1 156 aaKnown RBP4.4□□□□□ -1.71
PTPRK-211ENST00000429595 THYN1Q9P016 225 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 DNAH17Q9UFH2 4485 aa4.4□□□□□ -1.71
PTPRK-211ENST00000429595 AGRNO00468 2067 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 TRBV19A0A075B6N1 114 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 MRPS12O15235 138 aaKnown RBP4.39□□□□□ -1.71
PTPRK-211ENST00000429595 NBR2O15453 112 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 IGKV1-17P01599 117 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 RD3LP0DJH9 198 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 IGLC2P0DOY2 106 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 CTRLP40313 264 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 NUTF2P61970 127 aaKnown RBP4.39□□□□□ -1.71
PTPRK-211ENST00000429595 PSG9Q00887 426 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 TNXAQ16473 311 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 ZNF493Q6ZR52 646 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 Q8N976 141 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 C15orf53Q8NAA6 179 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 C18orf32Q8TCD1 76 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 VN1R17PQ8TDU5 208 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 SLC25A39Q9BZJ4 359 aaPredicted RBP4.39□□□□□ -1.71
PTPRK-211ENST00000429595 RPP21Q9H633 154 aaKnown RBP4.39□□□□□ -1.71
PTPRK-211ENST00000429595 NRN1Q9NPD7 142 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 CLEC5AQ9NY25 188 aa4.39□□□□□ -1.71
PTPRK-211ENST00000429595 MRPL36Q9P0J6 103 aaKnown RBP4.39□□□□□ -1.71
PTPRK-211ENST00000429595 MRPS16Q9Y3D3 137 aaKnown RBP4.39□□□□□ -1.71
PTPRK-211ENST00000429595 APOBP04114 4563 aaKnown RBP4.39□□□□□ -1.71
PTPRK-211ENST00000429595 IGLV11-55A0A075B6I3 123 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 HIGD1CA8MV81 97 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 H3BRN7 92 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 K7EIM0 57 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 P01737 135 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 SLC25A5P05141 298 aaKnown RBP4.38□□□□□ -1.71
PTPRK-211ENST00000429595 PRSS1P07477 247 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 PYYP10082 97 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 MGST1P10620 155 aaKnown RBP4.38□□□□□ -1.71
PTPRK-211ENST00000429595 ORM2P19652 201 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 MFAP4P55083 255 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 HBBP68871 147 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 C5orf64Q2M2E5 130 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 ZC2HC1BQ5TFG8 222 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 NIT1Q86X76 327 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 OR1B1Q8NGR6 318 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 BORCS7Q96B45 105 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 VAMP8Q9BV40 100 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 SAMD10Q9BYL1 202 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 Q9H3A6 140 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 PPP1R14DQ9NXH3 145 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 SELENOKQ9Y6D0 94 aa4.38□□□□□ -1.71
PTPRK-211ENST00000429595 GRIFINA4D1Z8 144 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 C2orf70A6NJV1 201 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 ZNF705FA8MVS1 300 aaPredicted RBP4.37□□□□□ -1.71
PTPRK-211ENST00000429595 ZNF705DP0CH99 300 aaPredicted RBP4.37□□□□□ -1.71
PTPRK-211ENST00000429595 ZNF705BP0CI00 300 aaPredicted RBP4.37□□□□□ -1.71
PTPRK-211ENST00000429595 SRIP30626 198 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 XGP55808 180 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 RPS20P60866 119 aaKnown RBP4.37□□□□□ -1.71
PTPRK-211ENST00000429595 RIGQ13278 110 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 C10orf55Q5SWW7 151 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 SIGLEC15Q6ZMC9 328 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 TMEM61Q8N0U2 210 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 ZNF414Q96IQ9 312 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 LINC00479Q96M42 142 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 FAM103A1Q9BTL3 118 aaKnown RBP4.37□□□□□ -1.71
PTPRK-211ENST00000429595 SNHG12Q9BXW3 62 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 PRO1933Q9H354 126 aa4.37□□□□□ -1.71
PTPRK-211ENST00000429595 UQCR10Q9UDW1 63 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms